(A) The population effective recombination parameter estimate
(per base pair) is plotted in black for sliding windows of 2 Mb centered on each SNP. Estimates are derived from the rate of decay of linkage disequilibrium with physical distance. Red bars indicate the estimates of
for whole recombination rate domains (arms and centers), and green bars indicate
, the estimated meiotic recombination rate per base pair, inferred for each domain from the recombination fraction observed in RIAILs (; ). (B) Domain-specific estimates of
ρ and
c are correlated, and
is about 40% the magnitude of
.