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Items: 1 to 20 of 1310

1.
CRISPR/Cas9 recombineering‐mediated deep mutational scanning of essential genes in Escherichia coli
Alaksh Choudhury, Jacob A Fenster, Reilly G Fankhauser, Joel L Kaar, Olivier Tenaillon, Ryan T Gill
Mol Syst Biol. 2020 Mar; 16(3): e9265. Published online 2020 Mar 16. doi: 10.15252/msb.20199265
PMCID:
PMC7073797
ArticlePDF–3.0M
2.
Comparative genomic analysis identifies X-factor (haemin)-independent Haemophilus haemolyticus: a formal re-classification of 'Haemophilus intermedius'
Tegan M. Harris, Erin P. Price, Derek S. Sarovich, Niels Nørskov-Lauritsen, Jemima Beissbarth, Anne B. Chang, Heidi C. Smith-Vaughan
Microb Genom. 2020 Jan; 6(1): e000303. Published online 2019 Dec 20. doi: 10.1099/mgen.0.000303
PMCID:
PMC7067038
ArticlePDF–2.2M
3.
Absolute quantitation of microbes using 16S rRNA gene metabarcoding: A rapid normalization of relative abundances by quantitative PCR targeting a 16S rRNA gene spike‐in standard
Olivier Zemb, Caroline S. Achard, Jerome Hamelin, Marie‐Léa De Almeida, Béatrice Gabinaud, Laurent Cauquil, Lisanne M.G. Verschuren, Jean‐Jacques Godon
Microbiologyopen. 2020 Mar; 9(3): e977. Published online 2020 Jan 11. doi: 10.1002/mbo3.977
Correction in:
Microbiologyopen. 2022 Jun; 11(3): e1305.
PMCID:
PMC7066463
ArticlePDF–1.2M
4.
Analyses of energy metabolism and stress defence provide insights into Campylobacter concisus growth and pathogenicity
Melissa Yeow, Fang Liu, Rena Ma, Timothy J. Williams, Stephen M. Riordan, Li Zhang
Gut Pathog. 2020; 12: 13. Published online 2020 Mar 5. doi: 10.1186/s13099-020-00349-6
PMCID:
PMC7059363
ArticlePDF–1.1M
5.
Hierarchy in Hfq Chaperon Occupancy of Small RNA Targets Plays a Major Role in Their Regulation
Raya Faigenbaum-Romm, Avichai Reich, Yair E. Gatt, Meshi Barsheshet, Liron Argaman, Hanah Margalit
Cell Rep. 2020 Mar 3; 30(9): 3127–3138.e6. Published online 2020 Mar 3. doi: 10.1016/j.celrep.2020.02.016
PMCID:
PMC7059120
Article
6.
Oral colonisation by antimicrobial-resistant Gram-negative bacteria among long-term care facility residents: prevalence, risk factors, and molecular epidemiology
Mi Nguyen-Tra Le, Shizuo Kayama, Mineka Yoshikawa, Toshinori Hara, Seiya Kashiyama, Junzo Hisatsune, Keiko Tsuruda, Makoto Onodera, Hiroki Ohge, Kazuhiro Tsuga, Motoyuki Sugai
Antimicrob Resist Infect Control. 2020; 9: 45. Published online 2020 Mar 4. doi: 10.1186/s13756-020-0705-1
PMCID:
PMC7057508
ArticlePDF–1.2M
7.
A survey of extended-spectrum beta-lactamase-producing Enterobacteriaceae in urban wetlands in southwestern Nigeria as a step towards generating prevalence maps of antimicrobial resistance
Olawale Olufemi Adelowo, Odion Osebhahiemen Ikhimiukor, Camila Knecht, John Vollmers, Mudit Bhatia, Anne-Kirstin Kaster, Jochen A. Müller
PLoS One. 2020; 15(3): e0229451. Published online 2020 Mar 4. doi: 10.1371/journal.pone.0229451
PMCID:
PMC7055906
ArticlePDF–1.9M
8.
The SNAP hypothesis: Chromosomal rearrangements could emerge from positive Selection during Niche Adaptation
Gerrit Brandis, Diarmaid Hughes
PLoS Genet. 2020 Mar; 16(3): e1008615. Published online 2020 Mar 4. doi: 10.1371/journal.pgen.1008615
PMCID:
PMC7055797
ArticlePDF–1.5M
9.
Excessive Promoters as Silencers of Genes Horizontally Acquired by Escherichia coli
Aleksandr Bykov, Olga Glazunova, Olga Alikina, Natalia Sukharicheva, Irina Masulis, Konstantin Shavkunov, Olga Ozoline
Front Mol Biosci. 2020; 7: 28. Published online 2020 Feb 26. doi: 10.3389/fmolb.2020.00028
PMCID:
PMC7054387
ArticlePDF–1.7M
10.
Genome-Based Analysis of Extended-Spectrum β-Lactamase-Producing Escherichia coli in the Aquatic Environment and Nile Perch (Lates niloticus) of Lake Victoria, Tanzania
Zebedayo Baniga, Yaovi M. Gildas Hounmanou, Egle Kudirkiene, Lughano J. M. Kusiluka, Robinson H. Mdegela, Anders Dalsgaard
Front Microbiol. 2020; 11: 108. Published online 2020 Feb 21. doi: 10.3389/fmicb.2020.00108
PMCID:
PMC7046833
ArticlePDF–873K
11.
Laboratory Evolution Experiments Help Identify a Predominant Region of Constitutive Stable DNA Replication Initiation
Reshma T. Veetil, Nitish Malhotra, Akshara Dubey, Aswin Sai Narain Seshasayee
mSphere. 2020 Jan-Feb; 5(1): e00939-19. Published online 2020 Feb 26. doi: 10.1128/mSphere.00939-19
PMCID:
PMC7045392
ArticlePDF–2.1M
12.
First Indian report on genome-wide comparison of multidrug-resistant Escherichia coli from blood stream infections
Naveen Kumar Devanga Ragupathi, Balaji Veeraraghavan, Dhiviya Prabaa Muthuirulandi Sethuvel, Shalini Anandan, Karthick Vasudevan, Ayyan Raj Neeravi, Jones Lionel Kumar Daniel, Sowmya Sathyendra, Ramya Iyadurai, Ankur Mutreja
PLoS One. 2020; 15(2): e0220428. Published online 2020 Feb 26. doi: 10.1371/journal.pone.0220428
PMCID:
PMC7043739
ArticlePDF–1.8M
13.
The conserved 3′ UTR-derived small RNA NarS mediates mRNA crossregulation during nitrate respiration
Chuan Wang, Yanjie Chao, Gianluca Matera, Qian Gao, Jörg Vogel
Nucleic Acids Res. 2020 Feb 28; 48(4): 2126–2143. Published online 2019 Dec 21. doi: 10.1093/nar/gkz1168
PMCID:
PMC7038943
ArticlePDF–8.3M
14.
High intrinsic hydrolytic activity of cyanobacterial RNA polymerase compensates for the absence of transcription proofreading factors
Amber Riaz-Bradley, Katherine James, Yulia Yuzenkova
Nucleic Acids Res. 2020 Feb 20; 48(3): 1341–1352. Published online 2019 Dec 16. doi: 10.1093/nar/gkz1130
PMCID:
PMC7026648
ArticlePDF–2.6M
15.
Rules and Exceptions: The Role of Chromosomal ParB in DNA Segregation and Other Cellular Processes
Adam Kawalek, Pawel Wawrzyniak, Aneta Agnieszka Bartosik, Grazyna Jagura-Burdzy
Microorganisms. 2020 Jan; 8(1): 0. Published online 2020 Jan 11. doi: 10.3390/microorganisms8010105
PMCID:
PMC7022226
ArticlePDF–2.8M
16.
In vitro self-replication and multicistronic expression of large synthetic genomes
K. Libicher, R. Hornberger, M. Heymann, H. Mutschler
Nat Commun. 2020; 11: 904. Published online 2020 Feb 14. doi: 10.1038/s41467-020-14694-2
PMCID:
PMC7021806
ArticlePDF–1.6M
17.
A stochastic model for simulating ribosome kinetics in vivo
Eric Charles Dykeman
PLoS Comput Biol. 2020 Feb; 16(2): e1007618. Published online 2020 Feb 12. doi: 10.1371/journal.pcbi.1007618
PMCID:
PMC7015319
ArticlePDF–2.4M
18.
Characterization and potential mechanisms of highly antibiotic tolerant VBNC Escherichia coli induced by low level chlorination
Chengsong Ye, Huirong Lin, Menglu Zhang, Sheng Chen, Xin Yu
Sci Rep. 2020; 10: 1957. Published online 2020 Feb 6. doi: 10.1038/s41598-020-58106-3
PMCID:
PMC7005040
ArticlePDF–1.5M
19.
Figure 1 Theory Meets Figure 2 Experiments in the Study of Gene Expression
Rob Phillips, Nathan M. Belliveau, Griffin Chure, Hernan G. Garcia, Manuel Razo-Mejia, Clarissa Scholes
Annu Rev Biophys. Author manuscript; available in PMC 2020 Feb 5.
Published in final edited form as: Annu Rev Biophys. 2019 May 6; 48: 121–163. doi: 10.1146/annurev-biophys-052118-115525
PMCID:
PMC7001876
ArticlePDF–2.1M
20.
Outer membrane protein A (OmpA) of extraintestinal pathogenic Escherichia coli
Daniel W. Nielsen, Nicole Ricker, Nicolle L. Barbieri, Heather K. Allen, Lisa K. Nolan, Catherine M. Logue
BMC Res Notes. 2020; 13: 51. Published online 2020 Jan 31. doi: 10.1186/s13104-020-4917-5
PMCID:
PMC6995065
ArticlePDF–1.9M

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