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Select item 69850991.

Key Transitions in the Evolution of Rapid and Slow Growing Mycobacteria Identified by Comparative Genomics

Nathan L. Bachmann, Rauf Salamzade, Abigail L. Manson, Richard Whittington, Vitali Sintchenko, Ashlee M. Earl, Ben J. Marais

Front Microbiol. 2019; 10: 3019. Published online 2020 Jan 21. doi: 10.3389/fmicb.2019.03019

PMCID:: PMC6985099

Abstract Article PDF–7.3M

Select item 67983842.

The recombination-cold region as an epidemiological marker of recombinogenic opportunistic pathogen Mycobacterium avium

Hirokazu Yano, Haruo Suzuki, Fumito Maruyama, Tomotada Iwamoto

BMC Genomics. 2019; 20: 752. Published online 2019 Oct 17. doi: 10.1186/s12864-019-6078-2

PMCID:: PMC6798384

Abstract Article PDF–2.1M

Select item 66915553.

Genomic determinants of speciation and spread of the Mycobacterium tuberculosis complex

Á. Chiner-Oms, L. Sánchez-Busó, J. Corander, S. Gagneux, S. R. Harris, D. Young, F. González-Candelas, I. Comas

Sci Adv. 2019 Jun; 5(6): eaaw3307. Published online 2019 Jun 12. doi: 10.1126/sciadv.aaw3307

PMCID:: PMC6691555

Abstract Article PDF–1.1M

Select item 66074334.

Mycobacterium decipiens sp. nov., a new species closely related to the Mycobacterium tuberculosis complex

Barbara A. Brown-Elliott, Patricia J. Simmer, Alberto Trovato, Emily P. Hyle, Sara Droz, Seanne P. Buckwalter, Emanuele Borroni, John A. Branda, Elkina Iana, Alessandro Mariottini, Jameelah Nelson, Alberto Matteelli, Nadege C. Toney, Claudio Scarparo, Tom J. B. de Man, Ravikiran Vasireddy, Rajesh T. Gandhi, Nancy L. Wengenack, Daniela M. Cirillo, Richard J. Wallace, Enrico Tortoli

Int J Syst Evol Microbiol. Author manuscript; available in PMC 2019 Nov 1.

Published in final edited form as: Int J Syst Evol Microbiol. 2018 Nov; 68(11): 3557–3562. Published online 2018 Sep 11. doi: 10.1099/ijsem.0.003031

PMCID:: PMC6607433

Abstract Article PDF–586K

Select item 65095525.

Accurate Phylogenetic Relationships Among Mycobacterium bovis Strains Circulating in France Based on Whole Genome Sequencing and Single Nucleotide Polymorphism Analysis

Amandine Hauer, Lorraine Michelet, Thierry Cochard, Maxime Branger, Javier Nunez, Maria-Laura Boschiroli, Franck Biet

Front Microbiol. 2019; 10: 955. Published online 2019 May 3. doi: 10.3389/fmicb.2019.00955

PMCID:: PMC6509552

Abstract Article PDF–4.3M

Select item 64093046.

Validation of a Real-Time PCR for the Detection of Mycobacterium tuberculosis Complex Members in Bovine Tissue Samples

Victor Lorente-Leal, Emmanouil Liandris, Elena Castellanos, Javier Bezos, Lucas Domínguez, Lucía de Juan, Beatriz Romero

Front Vet Sci. 2019; 6: 61. Published online 2019 Mar 4. doi: 10.3389/fvets.2019.00061

PMCID:: PMC6409304

Abstract Article PDF–384K

Select item 62774757.

A New Phylogenetic Framework for the Animal-Adapted Mycobacterium tuberculosis Complex

Daniela Brites, Chloé Loiseau, Fabrizio Menardo, Sonia Borrell, Maria Beatrice Boniotti, Robin Warren, Anzaan Dippenaar, Sven David Charles Parsons, Christian Beisel, Marcel A. Behr, Janet A. Fyfe, Mireia Coscolla, Sebastien Gagneux

Front Microbiol. 2018; 9: 2820. Published online 2018 Nov 27. doi: 10.3389/fmicb.2018.02820

PMCID:: PMC6277475

Abstract Article PDF–3.9M

Select item 62456938.

On the reconstruction of the ancestral bacterial genomes in genus Mycobacterium and Brucella

Christophe Guyeux, Bashar Al-Nuaimi, Bassam AlKindy, Jean-François Couchot, Michel Salomon

BMC Syst Biol. 2018; 12(Suppl 5): 100. Published online 2018 Nov 20. doi: 10.1186/s12918-018-0618-2

PMCID:: PMC6245693

Abstract Article PDF–7.0M

Select item 62338759.

Clinically prevalent mutations in Mycobacterium tuberculosis alter propionate metabolism and mediate multidrug tolerance

Nathan D. Hicks, Jian Yang, Xiaobing Zhang, Bing Zhao, Yonatan H. Grad, Liguo Liu, Xichao Ou, Zhili Chang, Hui Xia, Yang Zhou, Shengfen Wang, Jie Dong, Lilian Sun, Yafang Zhu, Yanlin Zhao, Qi Jin, Sarah M. Fortune

Nat Microbiol. Author manuscript; available in PMC 2019 Feb 6.

Published in final edited form as: Nat Microbiol. 2018 Sep; 3(9): 1032–1042. Published online 2018 Aug 6. doi: 10.1038/s41564-018-0218-3

PMCID:: PMC6233875

Abstract Article PDF–941K

Select item 621122410.

A Nonribosomal Peptide Synthase Gene Driving Virulence in Mycobacterium tuberculosis

Kiranmai Bhatt, Henrique Machado, Nuno S. Osório, Jeremy Sousa, Filipa Cardoso, Carlos Magalhães, Bing Chen, Mei Chen, John Kim, Albel Singh, Catarina M. Ferreira, António G. Castro, Egidio Torrado, William R. Jacobs, Jr., Apoorva Bhatt, Margarida Saraiva

mSphere. 2018 Sep-Oct; 3(5): e00352-18. Published online 2018 Oct 31. doi: 10.1128/mSphere.00352-18

PMCID:: PMC6211224

Abstract Article PDF–2.0M

Select item 618614311.

Modified genome comparison method: a new approach for identification of specific targets in molecular diagnostic tests using Mycobacterium tuberculosis complex as an example

Alireza Neshani, Reza Kamali Kakhki, Mojtaba Sankian, Hosna Zare, Amin Hooshyar Chichaklu, Mahsa Sayyadi, Kiarash Ghazvini

BMC Infect Dis. 2018; 18: 517. Published online 2018 Oct 12. doi: 10.1186/s12879-018-3417-x

PMCID:: PMC6186143

Abstract Article PDF–1.3M

Select item 552173112.

Mycobacterium tuberculosis Complex Exhibits Lineage-Specific Variations Affecting Protein Ductility and Epitope Recognition

Inmaculada Yruela, Bruno Contreras-Moreira, Carlos Magalhães, Nuno S. Osório, Jesús Gonzalo-Asensio

Genome Biol Evol. 2016 Dec; 8(12): 3751–3764. Published online 2016 Dec 24. doi: 10.1093/gbe/evw279

PMCID:: PMC5521731

Abstract Article PDF–1.5M

Select item 506884313.

Estimation of Gene Insertion/Deletion Rates with Missing Data

Utkarsh J. Dang, Alison M. Devault, Tatum D. Mortimer, Caitlin S. Pepperell, Hendrik N. Poinar, G. Brian Golding

Genetics. 2016 Oct; 204(2): 513–529. Published online 2016 Aug 25. doi: 10.1534/genetics.116.191973

PMCID:: PMC5068843

Abstract Article PDF–940K

Select item 504042214.

Genomics Study of Mycobacterium tuberculosis Strains from Different Ethnic Populations in Taiwan

Horng-Yunn Dou, Yih-Yuan Chen, Ying-Tsong Chen, Jia-Ru Chang, Chien-Hsing Lin, Keh-Ming Wu, Ming-Shian Lin, Ih-Jen Su, Shih-Feng Tsai

Evol Bioinform Online. 2016; 12: 213–221. Published online 2016 Sep 27. doi: 10.4137/EBO.S40152

PMCID:: PMC5040422

Abstract Article PDF–538K

Select item 502464115.

Key experimental evidence of chromosomal DNA transfer among selected tuberculosis-causing mycobacteria

Eva C. Boritsch, Varun Khanna, Alexandre Pawlik, Nadine Honoré, Victor H. Navas, Laurence Ma, Christiane Bouchier, Torsten Seemann, Philip Supply, Timothy P. Stinear, Roland Brosch

Proc Natl Acad Sci U S A. 2016 Aug 30; 113(35): 9876–9881. Published online 2016 Aug 15. doi: 10.1073/pnas.1604921113

PMCID:: PMC5024641

Abstract Article PDF–963K

Select item 497252716.

Paradoxical Hypersusceptibility of Drug-resistant Mycobacteriumtuberculosis to β-lactam Antibiotics

Keira A. Cohen, Tal El-Hay, Kelly L. Wyres, Omer Weissbrod, Vanisha Munsamy, Chen Yanover, Ranit Aharonov, Oded Shaham, Thomas C. Conway, Yaara Goldschmidt, William R. Bishai, Alexander S. Pym

EBioMedicine. 2016 Jul; 9: 170–179. Published online 2016 Jun 1. doi: 10.1016/j.ebiom.2016.05.041