Full text in PMC (nucleotide) for Gene (Select 417040) - PMC

Select item 59411491.

Whole-genome de novo sequencing reveals unique genes that contributed to the adaptive evolution of the Mikado pheasant

Chien-Yueh Lee, Ping-Han Hsieh, Li-Mei Chiang, Amrita Chattopadhyay, Kuan-Yi Li, Yi-Fang Lee, Tzu-Pin Lu, Liang-Chuan Lai, En-Chung Lin, Hsinyu Lee, Shih-Torng Ding, Mong-Hsun Tsai, Chien-Yu Chen, Eric Y. Chuang

Gigascience. 2018 May; 7(5): giy044. Published online 2018 May 2. doi: 10.1093/gigascience/giy044

PMCID:: PMC5941149

Article PDF–2.7M

Select item 52171012.

A New Chicken Genome Assembly Provides Insight into Avian Genome Structure

Wesley C. Warren, LaDeana W. Hillier, Chad Tomlinson, Patrick Minx, Milinn Kremitzki, Tina Graves, Chris Markovic, Nathan Bouk, Kim D. Pruitt, Francoise Thibaud-Nissen, Valerie Schneider, Tamer A. Mansour, C. Titus Brown, Aleksey Zimin, Rachel Hawken, Mitch Abrahamsen, Alexis B. Pyrkosz, Mireille Morisson, Valerie Fillon, Alain Vignal, William Chow, Kerstin Howe, Janet E. Fulton, Marcia M. Miller, Peter Lovell, Claudio V. Mello, Morgan Wirthlin, Andrew S. Mason, Richard Kuo, David W. Burt, Jerry B. Dodgson, Hans H. Cheng

G3 (Bethesda) 2017 Jan; 7(1): 109–117. Published online 2016 Nov 14. doi: 10.1534/g3.116.035923

PMCID:: PMC5217101

Article PDF–1.0M

Select item 51732523.

Signatures of Crested Ibis MHC Revealed by Recombination Screening and Short-Reads Assembly Strategy

Liao Chang, Shiyang He, Danqing Mao, Yuanhong Liu, Zijun Xiong, Dongke Fu, Bo Li, Shuguang Wei, Xun Xu, Shengbin Li, Hui Yuan

PLoS One. 2016; 11(12): e0168744. Published online 2016 Dec 20. doi: 10.1371/journal.pone.0168744

PMCID:: PMC5173252

Article PDF–2.7M

Select item 47055974.

A high-density SNP panel reveals extensive diversity, frequent recombination and multiple recombination hotspots within the chicken major histocompatibility complex B region between BG2 and CD1A1

Janet E. Fulton, Amy M. McCarron, Ashlee R. Lund, Kara N. Pinegar, Anna Wolc, Olympe Chazara, Bertrand Bed’Hom, Mark Berres, Marcia M. Miller

Genet Sel Evol. 2016; 48: 1. Published online 2016 Jan 7. doi: 10.1186/s12711-015-0181-x

PMCID:: PMC4705597

Article PDF–1.4M

Select item 43023025.

Genomic organization of the crested ibis MHC provides new insight into ancestral avian MHC structure

Li-Cheng Chen, Hong Lan, Li Sun, Yan-Li Deng, Ke-Yi Tang, Qiu-Hong Wan

Sci Rep. 2015; 5: 7963. Published online 2015 Jan 22. doi: 10.1038/srep07963

PMCID:: PMC4302302

Article PDF–1.8M

Select item 42636686.

Comparative Genome Analyses Reveal Distinct Structure in the Saltwater Crocodile MHC

Weerachai Jaratlerdsiri, Janine Deakin, Ricardo M. Godinez, Xueyan Shan, Daniel G. Peterson, Sylvain Marthey, Eric Lyons, Fiona M. McCarthy, Sally R. Isberg, Damien P. Higgins, Amanda Y. Chong, John St John, Travis C. Glenn, David A. Ray, Jaime Gongora

PLoS One. 2014; 9(12): e114631. Published online 2014 Dec 11. doi: 10.1371/journal.pone.0114631

PMCID:: PMC4263668

Article PDF–1.6M

Select item 40469837.

Sequence of a Complete Chicken BG Haplotype Shows Dynamic Expansion and Contraction of Two Gene Lineages with Particular Expression Patterns

Jan Salomonsen, John A. Chattaway, Andrew C. Y. Chan, Aimée Parker, Samuel Huguet, Denise A. Marston, Sally L. Rogers, Zhiguang Wu, Adrian L. Smith, Karen Staines, Colin Butter, Patricia Riegert, Olli Vainio, Line Nielsen, Bernd Kaspers, Darren K. Griffin, Fengtang Yang, Rima Zoorob, Francois Guillemot, Charles Auffray, Stephan Beck, Karsten Skjødt, Jim Kaufman

PLoS Genet. 2014 Jun; 10(6): e1004417. Published online 2014 Jun 5. doi: 10.1371/journal.pgen.1004417

PMCID:: PMC4046983

Article PDF–1.8M

Select item 36527498.

Evolutionary history of black grouse major histocompatibility complex class IIB genes revealed through single locus sequence-based genotyping

Tanja Strand, Biao Wang, Yvonne Meyer-Lucht, Jacob Höglund

BMC Genet. 2013; 14: 29. Published online 2013 Apr 24. doi: 10.1186/1471-2156-14-29

PMCID:: PMC3652749

Article PDF–829K

Select item 35002289.

Sequencing of the core MHC region of black grouse (Tetrao tetrix) and comparative genomics of the galliform MHC

Biao Wang, Robert Ekblom, Tanja M Strand, Silvia Portela-Bens, Jacob Höglund

BMC Genomics. 2012; 13: 553. Published online 2012 Oct 15. doi: 10.1186/1471-2164-13-553

PMCID:: PMC3500228

Article PDF–484K

Select item 349657810.

Integrated analysis of microRNA expression and mRNA transcriptome in lungs of avian influenza virus infected broilers

Ying Wang, Vinayak Brahmakshatriya, Blanca Lupiani, Sanjay M Reddy, Benjamin Soibam, Ashley L Benham, Preethi Gunaratne, Hsiao-ching Liu, Nares Trakooljul, Nancy Ing, Ron Okimoto, Huaijun Zhou

BMC Genomics. 2012; 13: 278. Published online 2012 Jun 22. doi: 10.1186/1471-2164-13-278

PMCID:: PMC3496578

Article PDF–616K

Select item 329387811.

Isolation of a 97-kb Minimal Essential MHC B Locus from a New Reverse-4D BAC Library of the Golden Pheasant

Qing Ye, Ke He, Shao-Ying Wu, Qiu-Hong Wan

PLoS One. 2012; 7(3): e32154. Published online 2012 Mar 5. doi: 10.1371/journal.pone.0032154

PMCID:: PMC3293878

Article PDF–684K

Select item 310822412.

Correlation in chicken between the marker LEI0258 alleles and Major Histocompatibility Complex sequences

Olympe Chazara, Helle Risdahl Juul-Madsen, Chi-Sheng Chang, Michele Tixier-Boichard, Bertrand Bed’hom

BMC Proc. 2011; 5(Suppl 4): S29. Published online 2011 Jun 3. doi: 10.1186/1753-6561-5-S4-S29

PMCID:: PMC3108224

Article PDF–254K

Select item 290758813.

Gene duplication and fragmentation in the zebra finch major histocompatibility complex

Christopher N Balakrishnan, Robert Ekblom, Martin Völker, Helena Westerdahl, Ricardo Godinez, Holly Kotkiewicz, David W Burt, Tina Graves, Darren K Griffin, Wesley C Warren, Scott V Edwards

BMC Biol. 2010; 8: 29. Published online 2010 Apr 1. doi: 10.1186/1741-7007-8-29

PMCID:: PMC2907588

Article PDF–3.2M

Select item 275785114.

BG1 has a major role in MHC-linked resistance to malignant lymphoma in the chicken

Ronald M. Goto, Yujun Wang, Robert L. Taylor, Jr., Patricia S. Wakenell, Kazuyoshi Hosomichi, Takashi Shiina, Craig S. Blackmore, W. Elwood Briles, Marcia M. Miller

Proc Natl Acad Sci U S A. 2009 Sep 29; 106(39): 16740–16745. Published online 2009 Sep 11. doi: 10.1073/pnas.0906776106

Correction in:: Proc Natl Acad Sci U S A. 2010 Apr 27; 107(17): 8041.

PMCID:: PMC2757851

Article PDF–920K

Select item 265736215.

Contribution of Mutation, Recombination, and Gene Conversion to Chicken Mhc-B Haplotype Diversity

Kazuyoshi Hosomichi, Marcia M. Miller, Ronald M. Goto, Yujun Wang, Shingo Suzuki, Jerzy K. Kulski, Masahide Nishibori, Hidetoshi Inoko, Kei Hanzawa, Takashi Shiina

J Immunol. Author manuscript; available in PMC 2009 Sep 1.

Published in final edited form as: J Immunol. 2008 Sep 1; 181(5): 3393–3399. doi: 10.4049/jimmunol.181.5.3393

Correction in:: volume 184 on page 5415

PMCID:: PMC2657362

Article PDF–2.3M

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