txid652676[Organism:noexp] - PMC

Select item 107510221.

ViWrap: A modular pipeline to identify, bin, classify, and predict viral–host relationships for viruses from metagenomes

Zhichao Zhou, Cody Martin, James C. Kosmopoulos, Karthik Anantharaman

Imeta. 2023 Aug; 2(3): e118. Published online 2023 Jun 7. doi: 10.1002/imt2.118

PMCID:: PMC10751022

Article PDF–1.2M

Select item 95165672.

Discovery and Characterization of the Metallopterin-Dependent Ergothioneine Synthase from Caldithrix abyssi

Mariia A. Beliaeva, Florian P. Seebeck

JACS Au. 2022 Sep 26; 2(9): 2098–2107. Published online 2022 Aug 16. doi: 10.1021/jacsau.2c00365

PMCID:: PMC9516567

Article PDF–2.8M

Select item 82291773.

A New Look at the Genus Solobacterium: A Retrospective Analysis of Twenty-Seven Cases of Infection Involving S. moorei and a Review of Sequence Databases and the Literature

Corentine Alauzet, Fabien Aujoulat, Alain Lozniewski, Safa Ben Brahim, Chloé Domenjod, Cécilia Enault, Jean-Philippe Lavigne, Hélène Marchandin

Microorganisms. 2021 Jun; 9(6): 1229. Published online 2021 Jun 5. doi: 10.3390/microorganisms9061229

PMCID:: PMC8229177

Article PDF–1.1M

Select item 69467964.

Genome- and Community-Level Interaction Insights into Carbon Utilization and Element Cycling Functions of Hydrothermarchaeota in Hydrothermal Sediment

Zhichao Zhou, Yang Liu, Wei Xu, Jie Pan, Zhu-Hua Luo, Meng Li

mSystems. 2020 Jan-Feb; 5(1): e00795-19. Published online 2020 Jan 7. doi: 10.1128/mSystems.00795-19

Correction in:: mSystems. 2022 Sep-Oct; 7(5): e00750-22.

PMCID:: PMC6946796

Article PDF–7.6M

Select item 46883765.

Genomic Reconstruction of an Uncultured Hydrothermal Vent Gammaproteobacterial Methanotroph (Family Methylothermaceae) Indicates Multiple Adaptations to Oxygen Limitation

Connor T. Skennerton, Lewis M. Ward, Alice Michel, Kyle Metcalfe, Chanel Valiente, Sean Mullin, Ken Y. Chan, Viviana Gradinaru, Victoria J. Orphan

Front Microbiol. 2015; 6: 1425. Published online 2015 Dec 23. doi: 10.3389/fmicb.2015.01425

PMCID:: PMC4688376

Article PDF–7.0M

Select item 31057156.

Comparative metagenomics of microbial communities inhabiting deep-sea hydrothermal vent chimneys with contrasting chemistries

Wei Xie, Fengping Wang, Lei Guo, Zeling Chen, Stefan M Sievert, Jun Meng, Guangrui Huang, Yuxin Li, Qingyu Yan, Shan Wu, Xin Wang, Shangwu Chen, Guangyuan He, Xiang Xiao, Anlong Xu

ISME J. 2011 Mar; 5(3): 414–426. Published online 2010 Oct 7. doi: 10.1038/ismej.2010.144

PMCID:: PMC3105715

Article PDF–869K

Select item 106404707.

A Study of Sponge Symbionts from Different Light Habitats

D. F. R. Cleary, N. J. de Voogd, T. M. Stuij, T. Swierts, V. Oliveira, A. R. M. Polónia, A. Louvado, N. C. M. Gomes, F. J. R. C. Coelho

Microb Ecol. 2023; 86(4): 2819–2837. Published online 2023 Aug 19. doi: 10.1007/s00248-023-02267-x

PMCID:: PMC10640470

Article PDF–2.2M

Select item 99154988.

ViWrap: A modular pipeline to identify, bin, classify, and predict viral-host relationships for viruses from metagenomes

Zhichao Zhou, Cody Martin, James C. Kosmopoulos, Karthik Anantharaman

Version 1. bioRxiv. Preprint. 2023 Feb 2. doi: 10.1101/2023.01.30.526317

Published in:: Imeta. 2023 Aug; 2(3): e118.

PMCID:: PMC9915498

Article PDF–710K

Select item 97896659.

Virus diversity and interactions with hosts in deep-sea hydrothermal vents

Ruolin Cheng, Xiaofeng Li, Lijing Jiang, Linfeng Gong, Claire Geslin, Zongze Shao

Microbiome. 2022; 10: 235. Published online 2022 Dec 24. doi: 10.1186/s40168-022-01441-6

PMCID:: PMC9789665

Article PDF–4.1M

Select item 785256310.

A network approach to elucidate and prioritize microbial dark matter in microbial communities

Tatyana Zamkovaya, Jamie S. Foster, Valérie de Crécy-Lagard, Ana Conesa

ISME J. 2021 Jan; 15(1): 228–244. Published online 2020 Sep 22. doi: 10.1038/s41396-020-00777-x

PMCID:: PMC7852563

Article PDF–2.3M

Select item 626534211.

Microbially Mediated Hydrogen Cycling in Deep-Sea Hydrothermal Vents

Nicole Adam, Mirjam Perner

Front Microbiol. 2018; 9: 2873. Published online 2018 Nov 23. doi: 10.3389/fmicb.2018.02873

PMCID:: PMC6265342

Article PDF–3.1M

Select item 383484612.

Sulfur oxidizers dominate carbon fixation at a biogeochemical hot spot in the dark ocean

Timothy E Mattes, Brook L Nunn, Katharine T Marshall, Giora Proskurowski, Deborah S Kelley, Orest E Kawka, David R Goodlett, Dennis A Hansell, Robert M Morris

ISME J. 2013 Dec; 7(12): 2349–2360. Published online 2013 Jul 11. doi: 10.1038/ismej.2013.113

PMCID:: PMC3834846

Article PDF–1.5M

Select item 365373613.

A bioinformatic analysis of ribonucleotide reductase genes in phage genomes and metagenomes

Bhakti Dwivedi, Bingjie Xue, Daniel Lundin, Robert A Edwards, Mya Breitbart

BMC Evol Biol. 2013; 13: 33. Published online 2013 Feb 7. doi: 10.1186/1471-2148-13-33

PMCID:: PMC3653736

Article PDF–2.7M

Select item 303530314.

Complete genome sequence of Syntrophothermus lipocalidus type strain (TGB-C1^T)

Olivier Duplex Ngatchou Djao, Xiaojing Zhang, Susan Lucas, Alla Lapidus, Tijana Glavina Del Rio, Matt Nolan, Hope Tice, Jan-Fang Cheng, Cliff Han, Roxanne Tapia, Lynne Goodwin, Sam Pitluck, Konstantinos Liolios, Natalia Ivanova, Konstantinos Mavromatis, Natalia Mikhailova, Galina Ovchinnikova, Amrita Pati, Evelyne Brambilla, Amy Chen, Krishna Palaniappan, Miriam Land, Loren Hauser, Yun-Juan Chang, Cynthia D. Jeffries, Manfred Rohde, Johannes Sikorski, Stefan Spring, Markus Göker, John C. Detter, Tanja Woyke, James Bristow, Jonathan A. Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans-Peter Klenk

Stand Genomic Sci. 2010 Dec 31; 3(3): 268–275. Published online 2010 Dec 15. doi: 10.4056/sigs.1233249

PMCID:: PMC3035303

Article PDF–2.7M

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