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Items: 1 to 20 of 910

1.
Unfolding the ventral nerve center of chaetognaths
June F. Ordoñez, Tim Wollesen
Neural Dev. 2024; 19: 5. Published online 2024 May 8. doi: 10.1186/s13064-024-00182-6
PMCID:
PMC11078758
ArticlePDF–11M
2.
WormBase 2024: status and transitioning to Alliance infrastructure
Paul W Sternberg, Kimberly Van Auken, Qinghua Wang, Adam Wright, Karen Yook, Magdalena Zarowiecki, Valerio Arnaboldi, Andrés Becerra, Stephanie Brown, Scott Cain, Juancarlos Chan, Wen J Chen, Jaehyoung Cho, Paul Davis, Stavros Diamantakis, Sarah Dyer, Dionysis Grigoriadis, Christian A Grove, Todd Harris, Kevin Howe, Ranjana Kishore, Raymond Lee, Ian Longden, Manuel Luypaert, Hans-Michael Müller, Paulo Nuin, Mark Quinton-Tulloch, Daniela Raciti, Tim Schedl, Gary Schindelman, Lincoln Stein
Genetics. 2024 May; 227(1): iyae050. Published online 2024 Apr 4. doi: 10.1093/genetics/iyae050
PMCID:
PMC11075546
ArticlePDF–983K
3.
Newly identified nematodes from the Great Salt Lake are associated with microbialites and specially adapted to hypersaline conditions
Julie Jung, Tobias Loschko, Shelley Reich, Maxim Rassoul-Agha, Michael S. Werner
Proc Biol Sci. 2024 Mar; 291(2018): 20232653. Published online March 13, 2024. doi: 10.1098/rspb.2023.2653
PMCID:
PMC10932707
ArticlePDF–1.1M
4.
Modulating cell proliferation by asymmetric division: A conserved pattern in the early embryogenesis of nematode species
Guoye Guan, Ce Luo, Lei-Han Tang, Chao Tang
MicroPubl Biol. 2024; 2024: 10.17912/micropub.biology.001006. Published online 2024 Mar 4. doi: 10.17912/micropub.biology.001006
PMCID:
PMC10949086
ArticlePDF–1.4M
5.
Spatial and temporal heterogeneity alter the cost of plasticity in Pristionchus pacificus
Ata Kalirad, Ralf J. Sommer
PLoS Comput Biol. 2024 Jan; 20(1): e1011823. Published online 2024 Jan 30. doi: 10.1371/journal.pcbi.1011823
PMCID:
PMC10857712
ArticlePDF–2.5M
6.
An improved solid medium-based culturing method for Steinernema hermaphroditum
Nathan Y. Rodak, Chieh-Hsiang Tan, Paul W. Sternberg
MicroPubl Biol. 2024; 2024: 10.17912/micropub.biology.001110. Published online 2024 Jan 27. doi: 10.17912/micropub.biology.001110
PMCID:
PMC10858997
ArticlePDF–1.2M
7.
Co-option of an Astacin Metalloprotease Is Associated with an Evolutionarily Novel Feeding Morphology in a Predatory Nematode
Yuuki Ishita, Ageha Onodera, Taisuke Ekino, Takahiro Chihara, Misako Okumura
Mol Biol Evol. 2023 Dec; 40(12): msad266. Published online 2023 Dec 18. doi: 10.1093/molbev/msad266
PMCID:
PMC10753534
ArticlePDF–36M
8.
A standard workflow for community-driven manual curation of Strongyloides genome annotations
Astra S. Bryant, Damia Akimori, Jonathan D. C. Stoltzfus, Elissa A. Hallem
Philos Trans R Soc Lond B Biol Sci. January 15, 2024; 379(1894): 20220443. Published online November 27, 2023. doi: 10.1098/rstb.2022.0443
PMCID:
PMC10676816
ArticlePDF–474K
9.
Pathogenicity of the root lesion nematode Pratylenchus neglectus depends on pre-culture conditions
Ehsan Fatemi, Christian Jung
Sci Rep. 2023; 13: 19642. Published online 2023 Nov 10. doi: 10.1038/s41598-023-46551-9
PMCID:
PMC10638436
ArticlePDF–1.4M
10.
A dominant dpy-10 co-transformation marker using CRISPR/Cas9 and a linear repair template in Caenorhabditis tropicalis
Montana Bobinski, David Pilgrim
MicroPubl Biol. 2023; 2023: 10.17912/micropub.biology.000900. Published online 2023 Nov 3. doi: 10.17912/micropub.biology.000900
PMCID:
PMC10656624
ArticlePDF–1.4M
11.
Comparative transcriptomics reveals that a novel form of phenotypic plasticity evolved via lineage‐specific changes in gene expression
Andrew J. Isdaner, Nicholas A. Levis, David W. Pfennig
Ecol Evol. 2023 Oct; 13(10): e10646. Published online 2023 Oct 20. doi: 10.1002/ece3.10646
PMCID:
PMC10589077
ArticlePDF–2.2M
12.
Germline mutation rate is elevated in young and old parents in Caenorhabditis remanei
Hwei-yen Chen, Therese Krieg, Brian Mautz, Cécile Jolly, Douglas Scofield, Alexei A Maklakov, Simone Immler
Evol Lett. 2023 Dec; 7(6): 478–489. Published online 2023 Oct 17. doi: 10.1093/evlett/qrad052
PMCID:
PMC10692996
ArticlePDF–3.2M
13.
Miniature spatial transcriptomics for studying parasite-endosymbiont relationships at the micro scale
Hailey Sounart, Denis Voronin, Yuvarani Masarapu, Matthew Chung, Sami Saarenpää, Elodie Ghedin, Stefania Giacomello
Nat Commun. 2023; 14: 6500. Published online 2023 Oct 14. doi: 10.1038/s41467-023-42237-y
PMCID:
PMC10576761
ArticlePDF–3.4M
14.
RNAinsecta: A tool for prediction of precursor microRNA in insects and search for their target in the model organism Drosophila melanogaster
Adhiraj Nath, Utpal Bora
PLoS One. 2023; 18(10): e0287323. Published online 2023 Oct 9. doi: 10.1371/journal.pone.0287323
PMCID:
PMC10561860
ArticlePDF–1.9M
15.
Exploring the antimicrobial peptidome of nematodes through phylum-spanning in silico analyses highlights novel opportunities for pathogen control
Allister Irvine, Sharon A. Huws, Louise E. Atkinson, Angela Mousley
PLoS Negl Trop Dis. 2023 Sep; 17(9): e0011618. Published online 2023 Sep 6. doi: 10.1371/journal.pntd.0011618
PMCID:
PMC10506718
ArticlePDF–3.6M
16.
Evolutionarily related host and microbial pathways regulate fat desaturation
Bennett W. Fox, Maximilian J. Helf, Russell N. Burkhardt, Alexander B. Artyukhin, Brian J. Curtis, Diana Fajardo Palomino, Amaresh Chaturbedi, Arnaud Tauffenberger, Chester J.J. Wrobel, Ying K. Zhang, Siu Sylvia Lee, Frank C. Schroeder
Version 1. bioRxiv. Preprint. 2023 Aug 31. doi: 10.1101/2023.08.31.555782
Published in:
Nat Commun. 2024; 15: 1520.
PMCID:
PMC10491262
ArticlePDF–2.6M
17.
Characterization of microRNAs in the cyst nematode Heterodera glycines identifies possible candidates involved in cross-kingdom interactions with its host Glycine max
Dave T. Ste-Croix, Richard R. Bélanger, Benjamin Mimee
RNA Biol. 2023; 20(1): 614–628. Published online 2023 Aug 20. doi: 10.1080/15476286.2023.2244790
PMCID:
PMC10443972
ArticlePDF–2.5M
18.
GINGER: an integrated method for high-accuracy prediction of gene structure in higher eukaryotes at the gene and exon level
Takeaki Taniguchi, Miki Okuno, Takahiro Shinoda, Fumiya Kobayashi, Kazuki Takahashi, Hideaki Yuasa, Yuta Nakamura, Hiroyuki Tanaka, Rei Kajitani, Takehiko Itoh
DNA Res. 2023 Aug; 30(4): dsad017. Published online 2023 Jul 21. doi: 10.1093/dnares/dsad017
PMCID:
PMC10439787
ArticlePDF–1.4M
19.
Testing the efficacy of different molecular tools for parasite conservation genetics: a case study using horsehair worms (Phylum: Nematomorpha)
Mattia De Vivo, Wei-Yun Chen, Jen-Pan Huang
Parasitology. 2023 Aug; 150(9): 842–851. Published online 2023 Jul 7. doi: 10.1017/S0031182023000641
PMCID:
PMC10478060
ArticlePDF–619K
20.
Thousands of Pristionchus pacificus orphan genes were integrated into developmental networks that respond to diverse environmental microbiota
Marina Athanasouli, Nermin Akduman, Waltraud Röseler, Penghieng Theam, Christian Rödelsperger
PLoS Genet. 2023 Jul; 19(7): e1010832. Published online 2023 Jul 3. doi: 10.1371/journal.pgen.1010832
PMCID:
PMC10348561
ArticlePDF–3.4M

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