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Select item 108476931.

Rapid adaptation of cellular metabolic rate to the MicroRNA complements of mammals and its relevance to the evolution of endothermy

Bastian Fromm, Thomas Sorger

iScience. 2024 Feb 16; 27(2): 108740. Published online 2023 Dec 21. doi: 10.1016/j.isci.2023.108740

PMCID:: PMC10847693

Article PDF–4.9M

Select item 108381192.

A highly contiguous genome assembly for the pocket mouse Perognathus longimembris longimembris

Krzysztof M Kozak, Merly Escalona, Noravit Chumchim, Colin Fairbairn, Mohan P A Marimuthu, Oanh Nguyen, Ruta Sahasrabudhe, William Seligmann, Chris Conroy, James L Patton, Rauri C K Bowie, Michael W Nachman

J Hered. 2024 Jan; 115(1): 130–138. Published online 2023 Oct 4. doi: 10.1093/jhered/esad060

PMCID:: PMC10838119

Article PDF–24M

Select item 107868593.

Different ways of evolving tool-using brains in teleosts and amniotes

Pierre Estienne, Matthieu Simion, Hanako Hagio, Naoyuki Yamamoto, Arnim Jenett, Kei Yamamoto

Commun Biol. 2024; 7: 88. Published online 2024 Jan 12. doi: 10.1038/s42003-023-05663-8

PMCID:: PMC10786859

Article PDF–6.3M

Select item 107692874.

Conserved and derived expression patterns and positive selection on dental genes reveal complex evolutionary context of ever-growing rodent molars

Zachary T. Calamari, Andrew Song, Emily Cohen, Muspika Akter, Rishi Das Roy, Outi Hallikas, Mona M. Christensen, Pengyang Li, Pauline Marangoni, Jukka Jernvall, Ophir D. Klein

Version 1. bioRxiv. Preprint. 2023 Dec 18. doi: 10.1101/2023.12.18.572015

PMCID:: PMC10769287

Article PDF–1.0M

Select item 107288865.

Geologically calibrated mammalian tree and its correlation with global events, including the emergence of humans

Soichi Osozawa

Ecol Evol. 2023 Dec; 13(12): e10827. Published online 2023 Dec 19. doi: 10.1002/ece3.10827

PMCID:: PMC10728886

Article PDF–7.6M

Select item 106996806.

Animal models of mpox virus infection and disease

Zheng-Kai Wei, Yi-Cheng Zhao, Ze-Dong Wang, Li-Yan Sui, Ying-Hua Zhao, Quan Liu

Infect Med (Beijing) 2023 Sep; 2(3): 153–166. Published online 2023 Jun 4. doi: 10.1016/j.imj.2023.05.004

PMCID:: PMC10699680

Article PDF–1.5M

Select item 105887917.

Duplications of Human Longevity-Associated Genes Across Placental Mammals

Zixia Huang, Chongyi Jiang, Jiayun Gu, Marek Uvizl, Sarahjane Power, Declan Douglas, Joanna Kacprzyk

Genome Biol Evol. 2023 Oct; 15(10): evad186. Published online 2023 Oct 13. doi: 10.1093/gbe/evad186

PMCID:: PMC10588791

Article PDF–1.3M

Select item 103390628.

Diversification processes of teleost intron-less opsin genes

Chihiro Fujiyabu, Keita Sato, Hideyo Ohuchi, Takahiro Yamashita

J Biol Chem. 2023 Jul; 299(7): 104899. Published online 2023 Jun 7. doi: 10.1016/j.jbc.2023.104899

PMCID:: PMC10339062

Article PDF–5.7M

Select item 103215419.

A stem cell zoo uncovers intracellular scaling of developmental tempo across mammals

Jorge Lázaro, Maria Costanzo, Marina Sanaki-Matsumiya, Charles Girardot, Masafumi Hayashi, Katsuhiko Hayashi, Sebastian Diecke, Thomas B. Hildebrandt, Giovanna Lazzari, Jun Wu, Stoyan Petkov, Rüdiger Behr, Vikas Trivedi, Mitsuhiro Matsuda, Miki Ebisuya

Cell Stem Cell. 2023 Jul 6; 30(7): 938–949.e7. doi: 10.1016/j.stem.2023.05.014

PMCID:: PMC10321541

Article

Select item 1026578710.

RegCloser: a robust regression approach to closing genome gaps

Shenghao Cao, Mengtian Li, Lei M. Li

BMC Bioinformatics. 2023; 24: 249. Published online 2023 Jun 13. doi: 10.1186/s12859-023-05367-0

PMCID:: PMC10265787

Article PDF–4.0M

Select item 1025010611.

Evolutionary constraint and innovation across hundreds of placental mammals

Matthew J. Christmas, Irene M. Kaplow, Diane P. Genereux, Michael X. Dong, Graham M. Hughes, Xue Li, Patrick F. Sullivan, Allyson G. Hindle, Gregory Andrews, Joel C. Armstrong, Matteo Bianchi, Ana M. Breit, Mark Diekhans, Cornelia Fanter, Nicole M. Foley, Daniel B. Goodman, Linda Goodman, Kathleen C. Keough, Bogdan Kirilenko, Amanda Kowalczyk, Colleen Lawless, Abigail L. Lind, Jennifer R. S. Meadows, Lucas R. Moreira, Ruby W. Redlich, Louise Ryan, Ross Swofford, Alejandro Valenzuela, Franziska Wagner, Ola Wallerman, Ashley R. Brown, Joana Damas, Kaili Fan, John Gatesy, Jenna Grimshaw, Jeremy Johnson, Sergey V. Kozyrev, Alyssa J. Lawler, Voichita D. Marinescu, Kathleen M. Morrill, Austin Osmanski, Nicole S. Paulat, BaDoi N. Phan, Steven K. Reilly, Daniel E. Schäffer, Cynthia Steiner, Megan A. Supple, Aryn P. Wilder, Morgan E. Wirthlin, James R. Xue, Zoonomia Consortium, Bruce W. Birren, Steven Gazal, Robert M. Hubley, Klaus-Peter Koepfli, Tomas Marques-Bonet, Wynn K. Meyer, Martin Nweeia, Pardis C. Sabeti, Beth Shapiro, Arian F. A. Smit, Mark S. Springer, Emma C. Teeling, Zhiping Weng, Michael Hiller, Danielle L. Levesque, Harris A. Lewin, William J. Murphy, Arcadi Navarro, Benedict Paten, Katherine S. Pollard, David A. Ray, Irina Ruf, Oliver A. Ryder, Andreas R. Pfenning, Kerstin Lindblad-Toh, Elinor K. Karlsson

Science. Author manuscript; available in PMC 2023 Jun 8.

Published in final edited form as: Science. 2023 Apr 28; 380(6643): eabn3943. Published online 2023 Apr 28. doi: 10.1126/science.abn3943

PMCID:: PMC10250106

Article PDF–2.5M

Select item 1023743712.

PyKleeBarcode: Enabling representation of the whole animal kingdom in information space

Wandrille Duchemin, David S. Thaler

PLoS One. 2023; 18(6): e0286314. Published online 2023 Jun 2. doi: 10.1371/journal.pone.0286314

PMCID:: PMC10237437

Article PDF–2.1M

Select item 1023374713.

A genomic timescale for placental mammal evolution

Nicole M. Foley, Victor C. Mason, Andrew J. Harris, Kevin R. Bredemeyer, Joana Damas, Harris A. Lewin, Eduardo Eizirik, John Gatesy, Elinor K. Karlsson, Kerstin Lindblad-Toh, Zoonomia Consortium, Mark S. Springer, William J. Murphy

Science. Author manuscript; available in PMC 2023 Jun 1.

Published in final edited form as: Science. 2023 Apr 28; 380(6643): eabl8189. Published online 2023 Apr 28. doi: 10.1126/science.abl8189

PMCID:: PMC10233747

Article PDF–1.9M

Select item 1018424514.

Developmental origin underlies evolutionary rate variation across the placental skull

Anjali Goswami, Eve Noirault, Ellen J. Coombs, Julien Clavel, Anne-Claire Fabre, Thomas J. D. Halliday, Morgan Churchill, Abigail Curtis, Akinobu Watanabe, Nancy B. Simmons, Brian L. Beatty, Jonathan H. Geisler, David L. Fox, Ryan N. Felice

Philos Trans R Soc Lond B Biol Sci. July 3, 2023; 378(1880): 20220083. Published online May 15, 2023. doi: 10.1098/rstb.2022.0083