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Items: 1 to 20 of 76

1.
Ateeq M. Khaliq, Cihat Erdogan, Zeyneb Kurt, Sultan Sevgi Turgut, Miles W. Grunvald, Tim Rand, Sonal Khare, Jeffrey A. Borgia, Dana M. Hayden, Sam G. Pappas, Henry R. Govekar, Audrey E. Kam, Jochen Reiser, Kiran Turaga, Milan Radovich, Yong Zang, Yingjie Qiu, Yunlong Liu, Melissa L. Fishel, Anita Turk, Vineet Gupta, Ram Al-Sabti, Janakiraman Subramanian, Timothy M. Kuzel, Anguraj Sadanandam, Levi Waldron, Arif Hussain, Mohammad Saleem, Bassel El-Rayes, Ameen A. Salahudeen, Ashiq Masood
Genome Biol. 2022; 23: 113. Published online 2022 May 11. doi: 10.1186/s13059-022-02677-z
PMCID:
PMC9092724
2.
Chloe Mirzayi, Audrey Renson, Genomic Standards Consortium, Massive Analysis and Quality Control Society, Fatima Zohra, Shaimaa Elsafoury, Ludwig Geistlinger, Lora Kasselman, Kelly Eckenrode, Janneke van de Wijgert, Amy Loughman, Francine Z. Marques, David MacIntyre, Manimozhiyan Arumugam, Rimsha Azhar, Francesco Beghini, Kirk Bergstrom, Ami Bhatt, Jordan Bisanz, Jonathan Braun, Hector Corrada Bravo, Gregory Buck, Frederic Bushman, David Casero, Gerard Clarke, Maria Carmen Collado, Paul Cotter, John F. Cryan, Ryan T. Demmer, Suzanne Devkota, Eran Elinav, Jennifer Fettweis, Robert D. Finn, Anthony Fodor, Sofia Forslund, Andre Franke, Cesare Furlanello, Jack Gilbert, Elizabeth Grice, Benjamin Haibe-Kains, Scott Handley, Pamela Herd, Susan Holmes, Jonathan Jacobs, Lisa Karstens, Rob Knight, Dan Knights, Omry Koren, Douglas Kwon, Morgan Langille, Brianna Lindsay, Dermot McGovern, Alice C. McHardy, Shannon McWeeney, Noel Mueller, Luigi Nezi, Matthew Olm, Noah Palm, Edoardo Pasolli, Jeroen Raes, Matthew R. Redinbo, Juan S. Escobar, Malte Rühlemann, R. Balfour Sartor, Patrick D Schloss, Lynn Schriml, Eran Segal, Michelle Shardell, Thomas Sharpton, Ekaterina Smirnova, Harry Sokol, Justin L. Sonnenburg, Sujatha Srinivasan, Louise B. Thingholm, Peter J. Turnbaugh, Vaibhav Upadhyay, Ramona Walls, Paul Wilmes, Takuji Yamada, Georg Zeller, Mingyu Zhang, Ni Zhao, Liping Zhao, Wenjun Bao, Aedin Culhane, Viswanath Devanarayan, Joaquin Dopazo, Xiaohui Fan, Matthias Fischer, Wendell Jones, Rebecca Kusko, Christopher Mason, Timothy Mercer, Susanna-Assunta Sansone, Andreas Scherer, Leming Shi, Shraddha Thakkar, Weida Tong, Russ Wolfinger, Christopher Hunter, Nicola Segata, Curtis Huttenhower, Jennifer B. Dowd, Heidi E. Jones, Levi Waldron
Nat Med.
Published in final edited form as: Nat Med. 2021 Nov; 27(11): 1885–1892. Published online 2021 Nov 17. doi: 10.1038/s41591-021-01552-x
PMCID:
PMC9105086
3.
Himel Mallick, Ali Rahnavard, Lauren J. McIver, Siyuan Ma, Yancong Zhang, Long H. Nguyen, Timothy L. Tickle, George Weingart, Boyu Ren, Emma H. Schwager, Suvo Chatterjee, Kelsey N. Thompson, Jeremy E. Wilkinson, Ayshwarya Subramanian, Yiren Lu, Levi Waldron, Joseph N. Paulson, Eric A. Franzosa, Hector Corrada Bravo, Curtis Huttenhower
PLoS Comput Biol. 2021 Nov; 17(11): e1009442. Published online 2021 Nov 16. doi: 10.1371/journal.pcbi.1009442
PMCID:
PMC8714082
4.
Denis Nash, Madhura S. Rane, Mindy Chang, Sarah Gorrell Kulkarni, Rebecca Zimba, William You, Amanda Berry, Chloe Mirzayi, Shivani Kochhar, Andrew Maroko, McKaylee M. Robertson, Drew A. Westmoreland, Angela M. Parcesepe, Levi Waldron, Christian Grov
Version 2. medRxiv. Preprint. 2021 Feb 16 [revised 2021 Oct 12]. doi: 10.1101/2021.02.12.21251659
PMCID:
PMC7899475
5.
Francesco Asnicar, Sarah E. Berry, Ana M. Valdes, Long H. Nguyen, Gianmarco Piccinno, David A. Drew, Emily Leeming, Rachel Gibson, Caroline Le Roy, Haya Al Khatib, Lucy Francis, Mohsen Mazidi, Olatz Mompeo, Mireia Valles-Colomer, Adrian Tett, Francesco Beghini, Léonard Dubois, Davide Bazzani, Andrew Maltez Thomas, Chloe Mirzayi, Asya Khleborodova, Sehyun Oh, Rachel Hine, Christopher Bonnett, Joan Capdevila Pujol, Serge Danzanvilliers, Francesca Giordano, Ludwig Geistlinger, Levi Waldron, Richard Davies, George Hadjigeorgiou, Jonathan Wolf, José M. Ordovás, Christopher Gardner, Paul W. Franks, Andrew T. Chan, Curtis Huttenhower, Tim D. Spector, Nicola Segata
Nat Med.
Published in final edited form as: Nat Med. 2021 Feb; 27(2): 321–332. Published online 2021 Jan 11. doi: 10.1038/s41591-020-01183-8
PMCID:
PMC8353542
6.
Adriana Tomic, Ivan Tomic, Levi Waldron, Ludwig Geistlinger, Max Kuhn, Rachel L. Spreng, Lindsay C. Dahora, Kelly E. Seaton, Georgia Tomaras, Jennifer Hill, Niharika A. Duggal, Ross D. Pollock, Norman R. Lazarus, Stephen D.R. Harridge, Janet M. Lord, Purvesh Khatri, Andrew J. Pollard, Mark M. Davis
Patterns (N Y) 2021 Jan 8; 2(1): 100178. Published online 2021 Jan 8. doi: 10.1016/j.patter.2020.100178
PMCID:
PMC7815964
7.
Sehyun Oh, Jasmine Abdelnabi, Ragheed Al-Dulaimi, Ayush Aggarwal, Marcel Ramos, Sean Davis, Markus Riester, Levi Waldron
Version 1. F1000Res. 2020; 9: 1493. Published online 2020 Dec 21. doi: 10.12688/f1000research.28033.1
PMCID:
PMC7856679
8.
Denis Nash, Saba Qasmieh, McKaylee Robertson, Madhura Rane, Rebecca Zimba, Sarah Kulkarni, Amanda Berry, William You, Chloe Mirzayi, Drew Westmoreland, Angela Parcesepe, Levi Waldron, Shivani Kochhar, Andrew R Maroko, Christian Grov, CHASING COVID Cohort Study Team
Version 1. medRxiv. Preprint. 2020 Dec 4. doi: 10.1101/2020.12.03.20243683
PMCID:
PMC7724676
9.
Benjamin Haibe-Kains, George Alexandru Adam, Ahmed Hosny, Farnoosh Khodakarami, Massive Analysis Quality Control (MAQC) Society Board of Directors, Levi Waldron, Bo Wang, Chris McIntosh, Anna Goldenberg, Anshul Kundaje, Casey S. Greene, Tamara Broderick, Michael M. Hoffman, Jeffrey T. Leek, Keegan Korthauer, Wolfgang Huber, Alvis Brazma, Joelle Pineau, Robert Tibshirani, Trevor Hastie, John P.A. Ioannidis, John Quackenbush, Hugo J.W.L. Aerts, Thakkar Shraddha, Rebecca Kusko, Susanna-Assunta Sansone, Weida Tong, Russ D. Wolfinger, Christopher Mason, Wendell Jones, Joaquin Dopazo, Cesare Furlanello
Nature.
Published in final edited form as: Nature. 2020 Oct; 586(7829): E14–E16. Published online 2020 Oct 14. doi: 10.1038/s41586-020-2766-y
PMCID:
PMC8144864
10.
Audrey Renson, Lora J. Kasselman, Jennifer B. Dowd, Levi Waldron, Heidi E. Jones, Pamela Herd
Brain Behav Immun Health. 2020 Dec; 9: 100155. Published online 2020 Oct 9. doi: 10.1016/j.bbih.2020.100155
PMCID:
PMC8474555
11.
Ludwig Geistlinger, Sehyun Oh, Marcel Ramos, Lucas Schiffer, Rebecca S. LaRue, Christine M. Henzler, Sarah A. Munro, Claire Daughters, Andrew C. Nelson, Boris J. Winterhoff, Zenas Chang, Shobhana Talukdar, Mihir Shetty, Sally A. Mullaney, Martin Morgan, Giovanni Parmigiani, Michael J. Birrer, Li-Xuan Qin, Markus Riester, Timothy K. Starr, Levi Waldron
Cancer Res.
Published in final edited form as: Cancer Res. 2020 Oct 15; 80(20): 4335–4345. Published online 2020 Aug 3. doi: 10.1158/0008-5472.CAN-20-0521
PMCID:
PMC7572645
12.
Ludwig Geistlinger, Gergely Csaba, Mara Santarelli, Marcel Ramos, Lucas Schiffer, Nitesh Turaga, Charity Law, Sean Davis, Vincent Carey, Martin Morgan, Ralf Zimmer, Levi Waldron
Brief Bioinform. 2021 Jan; 22(1): 545–556. Published online 2020 Mar 9. doi: 10.1093/bib/bbz158
PMCID:
PMC7820859
13.
Matthew Schwede, Levi Waldron, Samuel C. Mok, Wei Wei, Azfar Basunia, Melissa A. Merritt, Constantine S. Mitsiades, Giovanni Parmigiani, David Harrington, John Quackenbush, Michael J. Birrer, Aedín C. Culhane
Cancer Epidemiol Biomarkers Prev.
Published in final edited form as: Cancer Epidemiol Biomarkers Prev. 2020 Feb; 29(2): 509–519. Published online 2019 Dec 23. doi: 10.1158/1055-9965.EPI-18-1359
PMCID:
PMC7448721
14.
Audrey Renson, Heidi E. Jones, Francesco Beghini, Nicola Segata, Christine P. Zolnik, Mykhaylo Usyk, Thomas U. Moody, Lorna Thorpe, Robert Burk, Levi Waldron, Jennifer B. Dowd
Ann Epidemiol.
Published in final edited form as: Ann Epidemiol. 2019 Jul; 35: 73–80.e2. Published online 2019 May 8. doi: 10.1016/j.annepidem.2019.03.006
PMCID:
PMC6626698
15.
Jennifer Rosenbaum, Mykhaylo Usyk, Zigui Chen, Christine P. Zolnik, Heidi E. Jones, Levi Waldron, Jennifer B. Dowd, Lorna E. Thorpe, Robert D. Burk
Sci Rep. 2019; 9: 1531. Published online 2019 Feb 6. doi: 10.1038/s41598-018-38049-6
PMCID:
PMC6365504
16.
Levi Waldron, Lucas Schiffer, Rimsha Azhar, Marcel Ramos, Ludwig Geistlinger, Nicola Segata
Am J Epidemiol. 2019 Jun; 188(6): 1031–1032. Published online 2019 Jan 23. doi: 10.1093/aje/kwz008
PMCID:
PMC6545274
17.
Siyuan Ma, Shuji Ogino, Princy Parsana, Reiko Nishihara, Zhirong Qian, Jeanne Shen, Kosuke Mima, Yohei Masugi, Yin Cao, Jonathan A. Nowak, Kaori Shima, Yujin Hoshida, Edward L. Giovannucci, Manish K. Gala, Andrew T. Chan, Charles S. Fuchs, Giovanni Parmigiani, Curtis Huttenhower, Levi Waldron
Genome Biol. 2018; 19: 142. Published online 2018 Sep 25. doi: 10.1186/s13059-018-1511-4
PMCID:
PMC6154428
18.
Yuqing Zhang, Christoph Bernau, Giovanni Parmigiani, Levi Waldron
Biostatistics. 2020 Apr; 21(2): 253–268. Published online 2018 Sep 6. doi: 10.1093/biostatistics/kxy044
PMCID:
PMC7868050
19.
McKaylee M Robertson, Levi Waldron, Rebekkah S Robbins, Stephanie Chamberlin, Kate Penrose, Bruce Levin, Sarah Kulkarni, Sarah L Braunstein, Mary K Irvine, Denis Nash
Am J Epidemiol. 2018 Sep; 187(9): 1980–1989. Published online 2018 May 21. doi: 10.1093/aje/kwy103
PMCID:
PMC6118060
20.
Ludwig Geistlinger, Vinicius Henrique da Silva, Aline Silva Mello Cesar, Polyana Cristine Tizioto, Levi Waldron, Ralf Zimmer, Luciana Correia de Almeida Regitano, Luiz Lehmann Coutinho
Sci Rep. 2018; 8: 1399. Published online 2018 Jan 23. doi: 10.1038/s41598-018-19782-4
PMCID:
PMC5780461

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