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Items: 1 to 20 of 40616

1.
Reem Almugbel, Ling-Hong Hung, Jiaming Hu, Abeer Almutairy, Nicole Ortogero, Yashaswi Tamta, Ka Yee Yeung
J Am Med Inform Assoc. 2018 Jan; 25(1): 4–12. Published online 2017 Oct 28. doi: 10.1093/jamia/ocx120
PMCID:
PMC6381817
2.
Robert A. Amezquita, Aaron T. L. Lun, Etienne Becht, Vince J. Carey, Lindsay N. Carpp, Ludwig Geistlinger, Federico Marini, Kevin Rue-Albrecht, Davide Risso, Charlotte Soneson, Levi Waldron, Hervé Pagès, Mike L. Smith, Wolfgang Huber, Martin Morgan, Raphael Gottardo, Stephanie C. Hicks
Nat Methods.
Published in final edited form as: Nat Methods. 2020 Feb; 17(2): 137–145. Published online 2019 Dec 2. doi: 10.1038/s41592-019-0654-x
PMCID:
PMC7358058
3.
Wolfgang Huber, Vincent J. Carey, Robert Gentleman, Simon Anders, Marc Carlson, Benilton S. Carvalho, Hector Corrada Bravo, Sean Davis, Laurent Gatto, Thomas Girke, Raphael Gottardo, Florian Hahne, Kasper D. Hansen, Rafael A. Irizarry, Michael Lawrence, Michael I. Love, James MacDonald, Valerie Obenchain, Andrzej K. Oleś, Hervé Pagès, Alejandro Reyes, Paul Shannon, Gordon K. Smyth, Dan Tenenbaum, Levi Waldron, Martin Morgan
Nat Methods.
Published in final edited form as: Nat Methods. 2015 Feb; 12(2): 115–121. doi: 10.1038/nmeth.3252
PMCID:
PMC4509590
4.
Laurent Gautier
BMC Bioinformatics. 2010; 11(Suppl 12): S11. Published online 2010 Dec 21. doi: 10.1186/1471-2105-11-S12-S11
PMCID:
PMC3040525
5.
Alejandra González-Beltrán, Steffen Neumann, Eamonn Maguire, Susanna-Assunta Sansone, Philippe Rocca-Serra
BMC Bioinformatics. 2014; 15(Suppl 1): S11. Published online 2014 Jan 10. doi: 10.1186/1471-2105-15-S1-S11
PMCID:
PMC4015122
6.
Michael I. Love, Charlotte Soneson, Rob Patro
Version 3. F1000Res. 2018; 7: 952. Published online 2018 Oct 1. doi: 10.12688/f1000research.15398.3
PMCID:
PMC6178912
7.
Wolfgang Huber, Vincent Carey, Sean Davis, Kasper Daniel Hansen, Martin Morgan
Version 2. F1000Res. 2015; 4: 217. Published online 2016 Apr 20. doi: 10.12688/f1000research.6758.1
PMCID:
PMC4786899
8.
Marco Catoni, Jonathan MF Tsang, Alessandro P Greco, Nicolae Radu Zabet
Nucleic Acids Res. 2018 Nov 2; 46(19): e114. Published online 2018 Jul 9. doi: 10.1093/nar/gky602
PMCID:
PMC6212837
9.
Nathan Harmston, Elizabeth Ing-Simmons, Malcolm Perry, Anja Barešić, Boris Lenhard
BMC Genomics. 2015; 16: 963. Published online 2015 Nov 17. doi: 10.1186/s12864-015-2140-x
PMCID:
PMC4650858
10.
Malte Thodberg, Albin Sandelin
Version 1. F1000Res. 2019; 8: 886. Published online 2019 Jun 18. doi: 10.12688/f1000research.18456.1
PMCID:
PMC6613478
11.
Lihua J. Zhu, Benjamin R. Holmes, Neil Aronin, Michael H. Brodsky
PLoS One. 2014; 9(9): e108424. Published online 2014 Sep 23. doi: 10.1371/journal.pone.0108424
PMCID:
PMC4172692
12.
Vu T Chu, Raphael Gottardo, Adrian E Raftery, Roger E Bumgarner, Ka Yee Yeung
Genome Biol. 2008; 9(7): R118. Published online 2008 Jul 24. doi: 10.1186/gb-2008-9-7-r118
PMCID:
PMC2530872
13.
Robert C Gentleman, Vincent J Carey, Douglas M Bates, Ben Bolstad, Marcel Dettling, Sandrine Dudoit, Byron Ellis, Laurent Gautier, Yongchao Ge, Jeff Gentry, Kurt Hornik, Torsten Hothorn, Wolfgang Huber, Stefano Iacus, Rafael Irizarry, Friedrich Leisch, Cheng Li, Martin Maechler, Anthony J Rossini, Gunther Sawitzki, Colin Smith, Gordon Smyth, Luke Tierney, Jean YH Yang, Jianhua Zhang
Genome Biol. 2004; 5(10): R80. Published online 2004 Sep 15. doi: 10.1186/gb-2004-5-10-r80
PMCID:
PMC545600
14.
Moira Marizzoni, Thomas Gurry, Stefania Provasi, Gilbert Greub, Nicola Lopizzo, Federica Ribaldi, Cristina Festari, Monica Mazzelli, Elisa Mombelli, Marco Salvatore, Peppino Mirabelli, Monica Franzese, Andrea Soricelli, Giovanni B. Frisoni, Annamaria Cattaneo
Front Microbiol. 2020; 11: 1262. Published online 2020 Jun 17. doi: 10.3389/fmicb.2020.01262
PMCID:
PMC7318847
15.
Jan Stanstrup, Corey D. Broeckling, Rick Helmus, Nils Hoffmann, Ewy Mathé, Thomas Naake, Luca Nicolotti, Kristian Peters, Johannes Rainer, Reza M. Salek, Tobias Schulze, Emma L. Schymanski, Michael A. Stravs, Etienne A. Thévenot, Hendrik Treutler, Ralf J. M. Weber, Egon Willighagen, Michael Witting, Steffen Neumann
Metabolites. 2019 Oct; 9(10): 200. Published online 2019 Sep 23. doi: 10.3390/metabo9100200
PMCID:
PMC6835268
16.
Matthew E. Ritchie, Mark J. Dunning, Mike L. Smith, Wei Shi, Andy G. Lynch
PLoS Comput Biol. 2011 Dec; 7(12): e1002276. Published online 2011 Dec 1. doi: 10.1371/journal.pcbi.1002276
PMCID:
PMC3228778
17.
Lihua Julie Zhu, Michael Lawrence, Ankit Gupta, Hervé Pagès, Alper Kucukural, Manuel Garber, Scot A. Wolfe
BMC Genomics. 2017; 18: 379. Published online 2017 May 15. doi: 10.1186/s12864-017-3746-y
PMCID:
PMC5433024
18.
Antonio Colaprico, Tiago C. Silva, Catharina Olsen, Luciano Garofano, Claudia Cava, Davide Garolini, Thais S. Sabedot, Tathiane M. Malta, Stefano M. Pagnotta, Isabella Castiglioni, Michele Ceccarelli, Gianluca Bontempi, Houtan Noushmehr
Nucleic Acids Res. 2016 May 5; 44(8): e71. Published online 2015 Dec 23. doi: 10.1093/nar/gkv1507
PMCID:
PMC4856967
19.
Luyi Tian, Shian Su, Xueyi Dong, Daniela Amann-Zalcenstein, Christine Biben, Azadeh Seidi, Douglas J. Hilton, Shalin H. Naik, Matthew E. Ritchie
PLoS Comput Biol. 2018 Aug; 14(8): e1006361. Published online 2018 Aug 10. doi: 10.1371/journal.pcbi.1006361
PMCID:
PMC6105007
20.
Malte Thodberg, Axel Thieffry, Kristoffer Vitting-Seerup, Robin Andersson, Albin Sandelin
BMC Bioinformatics. 2019; 20: 487. Published online 2019 Oct 4. doi: 10.1186/s12859-019-3029-5
PMCID:
PMC6778389

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