J Data Mining Genomics Proteomics - PMC

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Items: 17

Select item 59955721.

Mammalian Glutamyl Aminopeptidase Genes (ENPEP) and Proteins: Comparative Studies of a Major Contributor to Arterial Hypertension

Roger S Holmes, Kimberly D Spradling-Reeves, Laura A Cox

J Data Mining Genomics Proteomics. Author manuscript; available in PMC 2018 Jun 11.

Published in final edited form as: J Data Mining Genomics Proteomics. 2017; 8(2): 2. Published online 2017 Jun 13. doi: 10.4172/2153-0602.1000211

PMCID:: PMC5995572

Abstract Article PDF–1.1M

Select item 42514962.

Current Bioinformatics Challenges in Proteome Dynamics using Heavy Water-based Metabolic Labeling

Takhar Kasumov, Belinda Willard, Rovshan G. Sadygov

J Data Mining Genomics Proteomics. Author manuscript; available in PMC 2014 Dec 2.

Published in final edited form as: J Data Mining Genomics Proteomics. 2014 Feb; 5(1): e112. Published online 2014 Jan 28. doi: 10.4172/2153-0602.1000e112

PMCID:: PMC4251496

Article PDF–111K

Select item 44877843.

Ranking of Prokaryotic Genomes Based on Maximization of Sortedness of Gene Lengths

A Bolshoy, B Salih, I Cohen, T Tatarinova

J Data Mining Genomics Proteomics. Author manuscript; available in PMC 2015 Jul 1.

Published in final edited form as: J Data Mining Genomics Proteomics. 2014; 5(1): 1000151. Published online 2014. doi: 10.4172/2153-0602.1000151

PMCID:: PMC4487784

Abstract Article PDF–639K

Select item 38822024.

SlopMap: a software application tool for quick and flexible identification of similar sequences using exact k-mer matching

Ilya Y. Zhbannikov, Samuel S. Hunter, Matthew L. Settles, James A. Foster

J Data Mining Genomics Proteomics. Author manuscript; available in PMC 2014 Jan 6.

Published in final edited form as: J Data Mining Genomics Proteomics. 2013 Aug 1; 4(3): 10.4172/2153-0602.1000133. Published online 2013 Jul 2. doi: 10.4172/2153-0602.1000133

PMCID:: PMC3882202

Abstract Article PDF–3.4M

Select item 36345995.

From the Large Scale Expression Analysis of Lupus Nephritis to Targeted Molecular Medicine

Celine C Berthier, Matthias Kretzler, Anne Davidson

J Data Mining Genomics Proteomics. Author manuscript; available in PMC 2013 Apr 24.

Published in final edited form as: J Data Mining Genomics Proteomics. 2012 Mar 27; 3(3): 1000123. Published online 2012 Mar 27. doi: 10.4172/2153-0602.1000123

PMCID:: PMC3634599

Abstract Article PDF–573K

Select item 32758156.

A Database of Gene-Environment Interactions Pertaining to Blood Lipid Traits, Cardiovascular Disease and Type 2 Diabetes

Yu-Chi Lee, Chao-Qiang Lai, Jose M Ordovas, Laurence D Parnell

J Data Mining Genomics Proteomics. Author manuscript; available in PMC 2012 Feb 9.

Published in final edited form as: J Data Mining Genomics Proteomics. 2011 Jan 1; 2(1): 106. doi: 10.4172/2153-0602.1000106

PMCID:: PMC3275815

Abstract Article PDF–84K

Select item 112258657.

Large-Sample Genomic Data Mining for Quantitative Traits in U.S. Holstein Cows

Yang Da, Dzianis Prakapenka, Zuoxiang Liang

J Data Mining Genomics Proteomics. Author manuscript; available in PMC 2024 Jul 5.

Published in final edited form as: J Data Mining Genomics Proteomics. 2024; 15(2): 340. Published online 2024 May 13.

PMCID:: PMC11225865

Abstract Article PDF–1.0M

Select item 47750938.

Towards Better Precision Medicine: PacBio Single-Molecule Long Reads Resolve the Interpretation of HIV Drug Resistant Mutation Profiles at Explicit Quasispecies (Haplotype) Level

Da Wei Huang, Castle Raley, Min Kang Jiang, Xin Zheng, Dun Liang, M Tauseef Rehman, Helene C. Highbarger, Xiaoli Jiao, Brad Sherman, Liang Ma, Xiaofeng Chen, Thomas Skelly, Jennifer Troyer, Robert Stephens, Tomozumi Imamichi, Alice Pau, Richard A Lempicki, Bao Tran, Dwight Nissley, H Clifford Lane, Robin L. Dewar

J Data Mining Genomics Proteomics. Author manuscript; available in PMC 2016 Mar 2.

Published in final edited form as: J Data Mining Genomics Proteomics. 2016 Jan; 7(1): 182. Published online 2015 Nov 8. doi: 10.4172/2153-0602.1000182

PMCID:: PMC4775093

Abstract Article PDF–1.1M

Select item 58780529.

Mining Next Generation Sequencing Data: How to Avoid “Treasure in, Error Out”

Zhihua Jiang

J Data Mining Genomics Proteomics. Author manuscript; available in PMC 2018 Mar 30.

Published in final edited form as: J Data Mining Genomics Proteomics. 2015; 6(2): e119. Published online 2015 Jun 6. doi: 10.4172/2153-0602.1000e119

PMCID:: PMC5878052

Article PDF–283K

Select item 446690310.

Causal Inference in the Age of Decision Medicine

A Yazdani, E Boerwinkle

J Data Mining Genomics Proteomics. Author manuscript; available in PMC 2015 Jun 15.

Published in final edited form as: J Data Mining Genomics Proteomics. 2015 Jan; 6(1): 163. Published online 2014 Oct 9. doi: 10.4172/2153-0602.1000163

PMCID:: PMC4466903

Abstract Article PDF–288K

Select item 388201811.

Gradient Boosting as a SNP Filter: an Evaluation Using Simulated and Hair Morphology Data

GH Lubke, C Laurin, R Walters, N Eriksson, P Hysi, TD Spector, GW Montgomery, NG Martin, SE Medland, DI Boomsma

J Data Mining Genomics Proteomics. Author manuscript; available in PMC 2014 Jan 6.

Published in final edited form as: J Data Mining Genomics Proteomics. 2013 Oct 20; 4: 10.4172/2153-0602.1000143. Published online 2013 Oct 20. doi: 10.4172/2153-0602.1000143

PMCID:: PMC3882018

Abstract Article PDF–442K

Select item 461249412.

mBLAST: Keeping up with the sequencing explosion for (meta)genome analysis

Curtis Davis, Karthik Kota, Venkat Baldhandapani, Wei Gong, Sahar Abubucker, Eric Becker, John Martin, Kristine M Wylie, Radhika Khetani, Matthew E. Hudson, George M. Weinstock, Makedonka Mitreva

J Data Mining Genomics Proteomics. Author manuscript; available in PMC 2016 Aug 1.

Published in final edited form as: J Data Mining Genomics Proteomics. 2015 Aug; 4(3): 135. Published online 2013 Jul 31. doi: 10.4172/2153-0602.1000135

PMCID:: PMC4612494

Abstract Article PDF–2.5M

Select item 381111613.

A Benchmark Study on Error Assessment and Quality Control of CCS Reads Derived from the PacBio RS

Xiaoli Jiao, Xin Zheng, Liang Ma, Geetha Kutty, Emile Gogineni, Qiang Sun, Brad T. Sherman, Xiaojun Hu, Kristine Jones, Castle Raley, Bao Tran, David J. Munroe, Robert Stephens, Dun Liang, Tomozumi Imamichi, Joseph A. Kovacs, Richard A. Lempicki, Da Wei Huang

J Data Mining Genomics Proteomics. Author manuscript; available in PMC 2013 Oct 29.

Published in final edited form as: J Data Mining Genomics Proteomics. 2013 Jul 31; 4(3): 16008. Published online 2013 Jul 31. doi: 10.4172/2153-0602.1000136

PMCID:: PMC3811116

Abstract Article PDF–1.3M

Select item 391760714.

Identification of Insertion Deletion Mutations from Deep Targeted Resequencing

Georges Natsoulis, Nancy Zhang, Katrina Welch, John Bell, Hanlee P Ji

J Data Mining Genomics Proteomics. Author manuscript; available in PMC 2014 Feb 7.

Published in final edited form as: J Data Mining Genomics Proteomics. 2013 Jul 2; 4(3): 1000132. Published online 2013 Jul 2. doi: 10.4172/2153-0602.1000132

PMCID:: PMC3917607

Abstract Article PDF–994K

Select item 398260315.

Meta-analysis of Aurora Kinase A (AURKA) Expression Data Reveals a Significant Correlation Between Increased AURKA Expression and Distant Metastases in Human ER-positive Breast Cancers

Heinz-Ulli G. Weier, Jian-Hua Mao

J Data Mining Genomics Proteomics. Author manuscript; available in PMC 2014 Apr 10.

Published in final edited form as: J Data Mining Genomics Proteomics. 2013 Mar 6; 4(1): 127. Published online 2013 Mar 6. doi: 10.4172/2153-0602.1000127

PMCID:: PMC3982603

Article PDF–681K

Select item 376096116.

Expression of HER2 in Breast Cancer Promotes a Massive Reorganization of Gene Activity and Suggests a Role for Epigenetic Regulation

Farahnaz Rahmatpanah, Zhenyu Jia, Xin Chen, Frank E. Jones, Michael McClelland, Dan Mercola

J Data Mining Genomics Proteomics. Author manuscript; available in PMC 2013 Sep 3.

Published in final edited form as: J Data Mining Genomics Proteomics. 2012; 3: e102. Published online 2012. doi: 10.4172/2153-0602.1000e102

PMCID:: PMC3760961

Article PDF–28K

Select item 313531117.

Comparison of Programmatic Approaches for Efficient Accessing to mzML Files

Miroslaw J. Gilski, Rovshan G. Sadygov

J Data Mining Genomics Proteomics. Author manuscript; available in PMC 2011 Jul 13.

Published in final edited form as: J Data Mining Genomics Proteomics. 2011 Jan 1; 2(1): 109. doi: 10.4172/2153-0602.1000109

PMCID:: PMC3135311

Abstract Article PDF–442K

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