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Select item 40643321.

The role of HTLV-1 clonality, proviral structure, and genomic integration site in adult T-cell leukemia/lymphoma

Lucy B. Cook, Anat Melamed, Heather Niederer, Mikel Valganon, Daniel Laydon, Letizia Foroni, Graham P. Taylor, Masao Matsuoka, Charles R. M. Bangham

Blood. 2014 Jun 19; 123(25): 3925–3931. Prepublished online 2014 Apr 15. doi: 10.1182/blood-2014-02-553602

PMCID:: PMC4064332

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Temporal dynamics of the host molecular responses underlying severe COVID-19 progression and disease resolution

Eugenia Z Ong, Shirin Kalimuddin, Wen Chong Chia, Sarah H Ooi, Clara WT Koh, Hwee Cheng Tan, Summer L Zhang, Jenny G Low, Eng Eong Ooi, Kuan Rong Chan

EBioMedicine. 2021 Mar; 65: 103262. Published online 2021 Mar 7. doi: 10.1016/j.ebiom.2021.103262

PMCID:: PMC7937043

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Select item 84503893.

Tissue-Resident-Memory CD8⁺ T Cells Bridge Innate Immune Responses in Neighboring Epithelial Cells to Control Human Genital Herpes

Tao Peng, Khamsone Phasouk, Catherine N. Sodroski, Sijie Sun, Yon Hwangbo, Erik D. Layton, Lei Jin, Alexis Klock, Kurt Diem, Amalia S. Magaret, Lichen Jing, Kerry Laing, Alvason Li, Meei-Li Huang, Max Mertens, Christine Johnston, Keith R. Jerome, David M. Koelle, Anna Wald, David M. Knipe, Lawrence Corey, Jia Zhu

Front Immunol. 2021; 12: 735643. Published online 2021 Sep 6. doi: 10.3389/fimmu.2021.735643

PMCID:: PMC8450389

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Select item 57908564.

Peromyscus leucopus mouse brain transcriptome response to Powassan virus infection

Luwanika Mlera, Kimberly Meade-White, Eric Dahlstrom, Rachel Baur, Kishore Kanakabandi, Kimmo Virtaneva, Stephen F. Porcella, Marshall E. Bloom

J Neurovirol. 2018; 24(1): 75–87. Published online 2017 Nov 16. doi: 10.1007/s13365-017-0596-y

PMCID:: PMC5790856

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Select item 32434945.

Investigation of Plasma Biomarkers in HIV-1/HCV Mono- and Coinfected Individuals by Multiplex iTRAQ Quantitative Proteomics

Vivekananda Shetty, Pooja Jain, Zacharie Nickens, Gomathinayagam Sinnathamby, Anand Mehta, Ramila Philip

OMICS. 2011 Oct; 15(10): 705–717. doi: 10.1089/omi.2011.0004

PMCID:: PMC3243494

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Altered Protein Networks and Cellular Pathways in Severe West Nile Disease in Mice

Christophe Fraisier, Luc Camoin, Stéphanie Lim, Mahfoud Bakli, Maya Belghazi, Patrick Fourquet, Samuel Granjeaud, Ab D. M. E. Osterhaus, Penelope Koraka, Byron Martina, Lionel Almeras

PLoS One. 2013; 8(7): e68318. Published online 2013 Jul 10. doi: 10.1371/journal.pone.0068318

Correction in:: PLoS One. 2013; 8(12): 10.1371/annotation/a01d68f4-f23d-4c0a-a0f8-f32432b0efa7.

PMCID:: PMC3707916

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HUMAN METAPNEUMOVIRUS INFECTION OF AIRWAY EPITHELIAL CELLS IS ASSOCIATED WITH CHANGES IN CORE METABOLIC PATHWAYS

Yanhua Zhao, Harendra Singh Chahar, Narayana Komaravelli, Anar Dossumbekova, Antonella Casola

Virology. Author manuscript; available in PMC 2020 May 1.

Published in final edited form as: Virology. 2019 May; 531: 183–191. Published online 2019 Mar 22. doi: 10.1016/j.virol.2019.03.011

PMCID:: PMC6486412

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Select item 22555688.

Feline immunodeficiency virus OrfA alters gene expression of splicing factors and proteasome-ubiquitination proteins

Magnus Sundstrom, Udayan Chatterji, Lana Schaffer, Sohela de Rozières, John H. Elder

Virology. Author manuscript; available in PMC 2009 Feb 20.

Published in final edited form as: Virology. 2008 Feb 20; 371(2): 394–404. Published online 2007 Oct 25. doi: 10.1016/j.virol.2007.09.039

PMCID:: PMC2255568

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Select item 63236739.

Bacterial and viral pathogen-associated molecular patterns induce divergent early transcriptomic landscapes in a bovine macrophage cell line

Felix N. Toka, Kiera Dunaway, Felicia Smaltz, Lidia Szulc-Dąbrowska, Jenny Drnevich, Matylda Barbara Mielcarska, Magdalena Bossowska-Nowicka, Matthias Schweizer

BMC Genomics. 2019; 20: 15. Published online 2019 Jan 8. doi: 10.1186/s12864-018-5411-5

PMCID:: PMC6323673

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Proteome Modulation in Peripheral Blood Mononuclear Cells of Peste des Petits Ruminants Vaccinated Goats and Sheep

Sajad Ahmad Wani, Amit Ranjan Sahu, Raja Ishaq Nabi Khan, Manas Ranjan Praharaj, Shikha Saxena, Kaushal Kishor Rajak, Dhanavelu Muthuchelvan, Aditya Sahoo, Bina Mishra, R. K. Singh, Bishnu Prasad Mishra, Ravi Kumar Gandham

Front Vet Sci. 2021; 8: 670968. Published online 2021 Sep 22. doi: 10.3389/fvets.2021.670968

PMCID:: PMC8493254

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Select item 195129411.

Early Blood Profiles of Virus Infection in a Monkey Model for Lassa Fever

Mahmoud M. Djavani, Oswald R. Crasta, Juan Carlos Zapata, Zhangjun Fei, Otto Folkerts, Bruno Sobral, Mark Swindells, Joseph Bryant, Harry Davis, C. David Pauza, Igor S. Lukashevich, Rasha Hammamieh, Marti Jett, Maria S. Salvato

J Virol. 2007 Aug; 81(15): 7960–7973. Published online 2007 May 23. doi: 10.1128/JVI.00536-07

PMCID:: PMC1951294

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A Fibrosis‐Independent Hepatic Transcriptomic Signature Identifies Drivers of Disease Progression in Primary Sclerosing Cholangitis

Yevgeniy Gindin, Chuhan Chung, Zhaoshi Jiang, Jing Zhu Zhou, Jun Xu, Andrew N. Billin, Robert P. Myers, Zachary Goodman, Abdolamir Landi, Michael Houghton, Richard M. Green, Cynthia Levy, Kris V. Kowdley, Christopher L. Bowlus, Andrew J. Muir, Michael Trauner

Hepatology. 2021 Mar; 73(3): 1105–1116. Published online 2021 Feb 28. doi: 10.1002/hep.31488

PMCID:: PMC8048608

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Select item 489510213.

Transcriptome Analysis Reveals a Signature Profile for Tick-Borne Flavivirus Persistence in HEK 293T Cells

Luwanika Mlera, Jennifer Lam, Danielle K. Offerdahl, Craig Martens, Daniel Sturdevant, Charles V. Turner, Stephen F. Porcella, Marshall E. Bloom

mBio. 2016 May-Jun; 7(3): e00314-16. Published online 2016 May 24. doi: 10.1128/mBio.00314-16

PMCID:: PMC4895102

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Select item 710283814.

iTRAQ-based comparative proteomic analysis of Vero cells infected with virulent and CV777 vaccine strain-like strains of porcine epidemic diarrhea virus

Xiaozhen Guo, Han Hu, Fangzhou Chen, Zhonghua Li, Shiyi Ye, Shuang Cheng, Mengjia Zhang, Qigai He

J Proteomics. 2016 Jan 1; 130: 65–75. Published online 2015 Sep 7. doi: 10.1016/j.jprot.2015.09.002

PMCID:: PMC7102838

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Select item 452302615.

A comparative analysis of host responses to avian influenza infection in ducks and chickens highlights a role for the interferon-induced transmembrane proteins in viral resistance

Jacqueline Smith, Nikki Smith, Le Yu, Ian R. Paton, Maria Weronika Gutowska, Heather L. Forrest, Angela F. Danner, J. Patrick Seiler, Paul Digard, Robert G. Webster, David W. Burt

BMC Genomics. 2015; 16(1): 574. Published online 2015 Aug 4. doi: 10.1186/s12864-015-1778-8

PMCID:: PMC4523026

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Select item 664637516.

Virus Genotype-Dependent Transcriptional Alterations in Lipid Metabolism and Inflammation Pathways in the Hepatitis C Virus-infected Liver

W. M. H. d’Avigdor, M. A. Budzinska, M. Lee, R. Lam, J. Kench, M. Stapelberg, S. V. McLennan, G. Farrell, J. George, G. W. McCaughan, T. Tu, N. A. Shackel

Sci Rep. 2019; 9: 10596. Published online 2019 Jul 22. doi: 10.1038/s41598-019-46664-0

PMCID:: PMC6646375

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Select item 472644917.

Identification of Symptomatic Fetuses Infected with Cytomegalovirus Using Amniotic Fluid Peptide Biomarkers

Cyrille Desveaux, Julie Klein, Marianne Leruez-Ville, Adela Ramirez-Torres, Chrystelle Lacroix, Benjamin Breuil, Carine Froment, Jean-Loup Bascands, Joost P. Schanstra, Yves Ville

PLoS Pathog. 2016 Jan; 12(1): e1005395. Published online 2016 Jan 25. doi: 10.1371/journal.ppat.1005395

PMCID:: PMC4726449

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Select item 711193218.

Early gene expression events in ferrets in response to SARS coronavirus infection versus direct interferon-alpha2b stimulation

Ali Danesh, Cheryl M. Cameron, Alberto J. León, Longsi Ran, Luoling Xu, Yuan Fang, Alyson A. Kelvin, Thomas Rowe, Honglin Chen, Yi Guan, Colleen B. Jonsson, Mark J. Cameron, David J. Kelvin

Virology. 2011 Jan 5; 409(1): 102–112. Published online 2010 Oct 28. doi: 10.1016/j.virol.2010.10.002