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Items: 1 to 20 of 22

1.
Ion Transport Activity Assay for Microbial Rhodopsin Expressed in Escherichia coli Cells
Masae Konno, Keiichi Inoue, Hideki Kandori
Bio Protoc. 2021 Aug 5; 11(15): e4115. Published online 2021 Aug 5. doi: 10.21769/BioProtoc.4115
PMCID:
PMC8376562
ArticlePDF–1.4M
2.
Microbiota-derived acetylcholine can promote gut motility in Drosophila melanogaster
Yuka Fujita, Hina Kosakamoto, Fumiaki Obata
Philos Trans R Soc Lond B Biol Sci. May 6, 2024; 379(1901): 20230075. Published online March 18, 2024. doi: 10.1098/rstb.2023.0075
PMCID:
PMC10945411
ArticlePDF–856K
3.
Development of a Gene Replacement Method for the Filamentous BacteriumLeptothrix cholodniiSP-6
Tatsuki Kunoh, Erika Ono, Tatsuya Yamamoto, Ichiro Suzuki, Minoru Takeda, Nobuhiko Nomura
Bio Protoc. 2023 Apr 20; 13(8): e4652. Published online 2023 Apr 20. doi: 10.21769/BioProtoc.4652
PMCID:
PMC10127049
ArticlePDF–1.1M
4.
Expression of microbial rhodopsins in Escherichia coli and their extraction and purification using styrene-maleic acid copolymers
Keiichi Kojima, Yuki Sudo
STAR Protoc. 2022 Mar 18; 3(1): 101046. Published online 2021 Dec 16. doi: 10.1016/j.xpro.2021.101046
PMCID:
PMC8693275
ArticlePDF–2.6M
5.
Teratoma Formation Assay for Assessing Pluripotency and Tumorigenicity of Pluripotent Stem Cells
Shingo Miyawaki, Yohei Okada, Hideyuki Okano, Kyoko Miura
Bio Protoc. 2017 Aug 20; 7(16): e2518. Published online 2017 Aug 20. doi: 10.21769/BioProtoc.2518
PMCID:
PMC8413610
ArticlePDF–2.7M
6.
Synthesis of Quenchbodies for One-Pot Detection of Stimulant Drug Methamphetamine
Hee-Jin Jeong, Jinhua Dong, Chang-Hun Yeom, Hiroshi Ueda
Methods Protoc. 2020 Jun; 3(2): 43. Published online 2020 Jun 11. doi: 10.3390/mps3020043
PMCID:
PMC7359713
ArticlePDF–2.6M
7.
Biogenic action of Lactobacillus plantarum SBT2227 promotes sleep in Drosophila melanogaster
Taro Ko, Hiroki Murakami, Azusa Kamikouchi, Hiroshi Ishimoto
iScience. 2022 Jul 15; 25(7): 104626. Published online 2022 Jun 17. doi: 10.1016/j.isci.2022.104626
PMCID:
PMC9257349
ArticlePDF–2.4M
8.
Protocol for Genome Editing to Produce Multiple Mutants in Wheat
Fumitaka Abe, Yuji Ishida, Hiroshi Hisano, Masaki Endo, Toshihiko Komari, Seiichi Toki, Kazuhiro Sato
STAR Protoc. 2020 Sep 18; 1(2): 100053. Published online 2020 Jun 13. doi: 10.1016/j.xpro.2020.100053
PMCID:
PMC7580089
ArticlePDF–978K
9.
Experimental demonstration of operon formation catalyzed by insertion sequence
Yuki Kanai, Saburo Tsuru, Chikara Furusawa
Nucleic Acids Res. 2022 Feb 22; 50(3): 1673–1686. Published online 2022 Jan 24. doi: 10.1093/nar/gkac004
PMCID:
PMC8860574
ArticlePDF–1.4M
10.
Detecting Photoactivatable Cre-mediated Gene Deletion Efficiency in Escherichia coli
Yuta Koganezawa, Yuichi Wakamoto, Moritoshi Sato, Miki Umetani
Bio Protoc. 2023 Jun 5; 13(11): e4685. Published online 2023 Jun 5. doi: 10.21769/BioProtoc.4685
PMCID:
PMC10262074
ArticlePDF–392K
11.
Genetic properties underlying transcriptional variability across different perturbations
Saburo Tsuru, Chikara Furusawa
Nat Commun. 2025; 16: 2421. Published online 2025 Mar 21. doi: 10.1038/s41467-025-57642-8
PMCID:
PMC11928491
ArticlePDF–22M
12.
Precise Generation of Human Induced Pluripotent Stem Cell–derived Cell Lines Harboring Disease-relevant Single Nucleotide Variants Using a Prime Editing System
Seiya Kanno, Kota Sato, Toru Nakazawa
Bio Protoc. 2025 Feb 20; 15(4): e5191. Published online 2025 Feb 20. doi: 10.21769/BioProtoc.5191
PMCID:
PMC11865833
ArticlePDF–1.6M
13.
Determination of Local pH Differences within Living Salmonella Cells by High-resolution pH Imaging Based on pH-sensitive GFP Derivative, pHluorin(M153R)
Yusuke V. Morimoto, Nobunori Kami-ike, Keiichi Namba, Tohru Minamino
Bio Protoc. 2017 Sep 5; 7(17): e2529. Published online 2017 Sep 5. doi: 10.21769/BioProtoc.2529
PMCID:
PMC8413601
ArticlePDF–948K
14.
Bacterial Intracellular Sodium Ion Measurement using CoroNa Green
Yusuke V. Morimoto, Keiichi Namba, Tohru Minamino
Bio Protoc. 2017 Jan 5; 7(1): e2092. Published online 2017 Jan 5. doi: 10.21769/BioProtoc.2092
PMCID:
PMC8376504
ArticlePDF–351K
15.
Protocol to identify the ligand binding site of Mincle using NMR spectroscopy
Atsushi Furukawa, Hiroyuki Kumeta, Takashi Saitoh, Katsumi Maenaka
STAR Protoc. 2024 Jun 21; 5(2): 102996. Published online 2024 Apr 3. doi: 10.1016/j.xpro.2024.102996
PMCID:
PMC11000184
ArticlePDF–2.8M
16.
Avoidance of thiazoline compound depends on multiple sensory pathways mediated by TrpA1 and ORs in Drosophila
Shoma Sato, Aliyu Mudassir Magaji, Makoto Tominaga, Takaaki Sokabe
Front Mol Neurosci. 2023; 16: 1249715. Published online 2023 Dec 22. doi: 10.3389/fnmol.2023.1249715
PMCID:
PMC10771277
ArticlePDF–6.6M
17.
LIGHTHOUSE illuminates therapeutics for a variety of diseases including COVID-19
Hideyuki Shimizu, Manabu Kodama, Masaki Matsumoto, Yasuko Orba, Michihito Sasaki, Akihiko Sato, Hirofumi Sawa, Keiichi I. Nakayama
iScience. 2022 Nov 18; 25(11): 105314. Published online 2022 Oct 10. doi: 10.1016/j.isci.2022.105314
PMCID:
PMC9549714
ArticlePDF–3.8M
18.
Protocol for the isolation of GFP-expressing ferroptosis-dependent extracellular vesicles in in vitro cell culture models
Fumiya Ito, Izumi Yanatori, Katsuhiro Kato, Shinya Toyokuni
STAR Protoc. 2024 Mar 15; 5(1): 102892. Published online 2024 Feb 15. doi: 10.1016/j.xpro.2024.102892
PMCID:
PMC10877193
ArticlePDF–5.6M
19.
H2 Production from Methyl Viologen–Dependent Hydrogenase Activity Monitored by Gas Chromatography
Nuttavut Kosem
Bio Protoc. 2023 Dec 5; 13(23): e4895. Published online 2023 Dec 5. doi: 10.21769/BioProtoc.4895
PMCID:
PMC10714151
ArticlePDF–1017K
20.
Positive Effects of Oral Antibiotic Administration in Murine Chronic Graft-Versus-Host Disease
Shinri Sato, Eisuke Shimizu, Jingliang He, Mamoru Ogawa, Kazuki Asai, Hiroyuki Yazu, Robert Rusch, Mio Yamane, Fan Yang, Shinji Fukuda, Yutaka Kawakami, Kazuo Tsubota, Yoko Ogawa
Int J Mol Sci. 2021 Apr; 22(7): 3745. Published online 2021 Apr 3. doi: 10.3390/ijms22073745
PMCID:
PMC8038334
ArticlePDF–5.4M

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