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Select item 110142661.

Programmable RNA 5-methylcytosine (m⁵C) modification of cellular RNAs by dCasRx conjugated methyltransferase and demethylase

Tao Zhang, Feiyu Zhao, Jinze Li, Xiaodi Sun, Xiyun Zhang, Hejun Wang, Peng Fan, Liangxue Lai, Zhanjun Li, Tingting Sui

Nucleic Acids Res. 2024 Apr 12; 52(6): 2776–2791. Published online 2024 Feb 15. doi: 10.1093/nar/gkae110

PMCID:: PMC11014266

Abstract Article PDF–2.3M

Select item 109685742.

Updated Insights into Probiotics and Hepatobiliary Diseases

Xiaoyu Xu, Cheng Zhang, Guoyi Tang, Ning Wang, Yibin Feng

Biomedicines. 2024 Mar; 12(3): 515. Published online 2024 Feb 25. doi: 10.3390/biomedicines12030515

PMCID:: PMC10968574

Abstract Article PDF–315K

Select item 109461113.

Differential network connectivity analysis for microbiome data adjusted for clinical covariates using jackknife pseudo-values

Seungjun Ahn, Somnath Datta

BMC Bioinformatics. 2024; 25: 117. Published online 2024 Mar 18. doi: 10.1186/s12859-024-05689-7

PMCID:: PMC10946111

Abstract Article PDF–1.6M

Select item 108762934.

Loss of symbiotic and increase of virulent bacteria through microbial networks in Lynch syndrome colon carcinogenesis

Mohammad Sadeghi, Denis Mestivier, Etienne Carbonnelle, Robert Benamouzig, Khashayarsha Khazaie, Iradj Sobhani

Front Oncol. 2023; 13: 1313735. Published online 2024 Feb 5. doi: 10.3389/fonc.2023.1313735

PMCID:: PMC10876293

Abstract Article PDF–3.4M

Select item 108597155.

Gut microbiota signatures in inflammatory bowel disease

Marie Vibeke Vestergaard, Kristine H. Allin, Carsten Eriksen, Oliwia Zakerska‐Banaszak, Ramesh P. Arasaradnam, Mohammad T. Alam, Karsten Kristiansen, Susanne Brix, Tine Jess

United European Gastroenterol J. 2024 Feb; 12(1): 22–33. Published online 2023 Dec 2. doi: 10.1002/ueg2.12485

PMCID:: PMC10859715

Abstract Article PDF–678K

Select item 107868916.

Massively parallel profiling of RNA-targeting CRISPR-Cas13d

Hung-Che Kuo, Joshua Prupes, Chia-Wei Chou, Ilya J. Finkelstein

Nat Commun. 2024; 15: 498. Published online 2024 Jan 12. doi: 10.1038/s41467-024-44738-w

PMCID:: PMC10786891

Abstract Article PDF–2.6M

Select item 107782287.

Seasonal Variations in Production Performance, Health Status, and Gut Microbiota of Meat Rabbit Reared in Semi-Confined Conditions

Dingcheng Ye, Xiaoning Ding, Shuo Pang, Yating Gan, Zhechen Li, Qianfu Gan, Shaoming Fang

Animals (Basel) 2024 Jan; 14(1): 113. Published online 2023 Dec 28. doi: 10.3390/ani14010113

PMCID:: PMC10778228

Abstract Article PDF–2.2M

Select item 107601678.

Unfolding and De-confounding: Biologically meaningful causal inference from longitudinal multi-omic networks using METALICA

Daniel Ruiz-Perez, Isabella Gimon, Musfiqur Sazal, Kalai Mathee, Giri Narasimhan

Version 1. bioRxiv. Preprint. 2023 Dec 13. doi: 10.1101/2023.12.12.571384

PMCID:: PMC10760167

Abstract Article PDF–3.0M

Select item 107581489.

Altered Gut Microbiota as a Potential Risk Factor for Coronary Artery Disease in Diabetes: A Two-Sample Bi-Directional Mendelian Randomization Study

Zhaopei Zeng, Junxiong Qiu, Yu Chen, Diefei Liang, Feng Wei, Yuan Fu, Jiarui Zhang, Xiexiao Wei, Xinyi Zhang, Jun Tao, Liling Lin, Junmeng Zheng

Int J Med Sci. 2024; 21(2): 376–395. Published online 2024 Jan 1. doi: 10.7150/ijms.92131

PMCID:: PMC10758148

Abstract Article PDF–5.5M

Select item 1075397810.

Co-Housing and Fecal Microbiota Transplantation: Technical Support for TCM Herbal Treatment of Extra-Intestinal Diseases Based on Gut Microbial Ecosystem Remodeling

Xian Sun, Xi Zhou, Weiming He, Wei Sun, Zheng Xu

Drug Des Devel Ther. 2023; 17: 3803–3831. Published online 2023 Dec 24. doi: 10.2147/DDDT.S443462

PMCID:: PMC10753978

Abstract Article PDF–6.4M

Select item 1074098511.

Fermented Chinese Herbs Improve the Growth and Immunity of Growing Pigs through Regulating Colon Microbiota and Metabolites

Junhao Zhang, Zhiheng Shu, Sixiao Lv, Qingwen Zhou, Yuanhao Huang, Yingjie Peng, Jun Zheng, Yi Zhou, Chao Hu, Shile Lan

Animals (Basel) 2023 Dec; 13(24): 3867. Published online 2023 Dec 15. doi: 10.3390/ani13243867

PMCID:: PMC10740985

Abstract Article PDF–4.6M

Select item 1065362412.

Gut microbiota and immunotherapy of renal cell carcinoma

Stefano Bibbò, Serena Porcari, Livio Enrico Del Vecchio, Andrea Severino, Benjamin H. Mullish, Gianluca Ianiro, Antonio Gasbarrini, Giovanni Cammarota

Hum Vaccin Immunother. 2023; 19(3): 2268982. Published online 2023 Nov 13. doi: 10.1080/21645515.2023.2268982

PMCID:: PMC10653624

Abstract Article PDF–461K

Select item 1052578013.

Washed Microbiota Transplantation Improves Patients with Overweight by the Gut Microbiota and Sphingolipid Metabolism

Lei Wu, Zi-Han Lin, Xin-Jian Lu, Xuan Hu, Hao-Jie Zhong, De-Jiang Lin, Tao Liu, Jia-Ting Xu, Wen-Ying Lin, Qing-Ping Wu, Xing-Xiang He

Biomedicines. 2023 Sep; 11(9): 2415. Published online 2023 Aug 29. doi: 10.3390/biomedicines11092415

PMCID:: PMC10525780

Abstract Article PDF–3.9M

Select item 1049812814.

HIV infection detection using CRISPR/Cas systems: Present and future prospects

Bingpeng Deng, Jing Xue

Comput Struct Biotechnol J. 2023; 21: 4409–4423. Published online 2023 Sep 7. doi: 10.1016/j.csbj.2023.09.005

PMCID:: PMC10498128

Abstract Article PDF–8.5M

Select item 1049132615.

Antiretroviral treatment is less effective at reducing gut microbiome-associated inflammation and T cell activation in people living with HIV in rural versus urban Zimbabwe

Alessandro Lazzaro, Angela Sofia Burkhart Colorado, Charles Preston Neff, Nichole Nusbacher, Kathryn Boyd, Suzanne Fiorillo, Casey Martin, Janet Siebert, Thomas Campbell, Margaret Borok, Brent Palmer, Catherine Lozupone

Version 1. Res Sq. Preprint. 2023 Aug 31. doi: 10.21203/rs.3.rs-3300723/v1

Published in:: Microbiome. 2024; 12: 18.

PMCID:: PMC10491326

Abstract Article PDF–1.9M

Select item 1048611016.

Gut microbes exacerbate systemic inflammation and behavior disorders in neurologic disease CADASIL

Sheng Liu, Xuejiao Men, Yang Guo, Wei Cai, Ruizhen Wu, Rongsui Gao, Weicong Zhong, Huating Guo, Hengfang Ruan, Shuli Chou, Junrui Mai, Suning Ping, Chao Jiang, Hongwei Zhou, Xiangyu Mou, Wenjing Zhao, Zhengqi Lu

Microbiome. 2023; 11: 202. Published online 2023 Sep 8. doi: 10.1186/s40168-023-01638-3

PMCID:: PMC10486110

Abstract Article PDF–4.0M

Select item 1038562717.

Changes in the Human Gut Microbiome during Dietary Supplementation with Modified Rice Bran Arabinoxylan Compound

Emily Schupfer, Soo Liang Ooi, Thomas C. Jeffries, Shaoyu Wang, Peter S. Micalos, Sok Cheon Pak

Molecules. 2023 Jul; 28(14): 5400. Published online 2023 Jul 14. doi: 10.3390/molecules28145400

PMCID:: PMC10385627

Abstract Article PDF–1.0M

Select item 1036466618.

Formyl peptide receptor-1 (FPR1) represses intestinal oncogenesis

Julie Le Naour, Léa Montégut, Yuhong Pan, Sarah Adriana Scuderi, Pierre Cordier, Adrien Joseph, Allan Sauvat, Valerio Iebba, Juliette Paillet, Gladys Ferrere, Ludivine Brechard, Claire Mulot, Grégory Dubourg, Laurence Zitvogel, Jonathan G. Pol, Erika Vacchelli, Pierre-Laurent Puig, Guido Kroemer

Oncoimmunology. 2023; 12(1): 2237354. Published online 2023 Jul 21. doi: 10.1080/2162402X.2023.2237354