Entry - #617090 - MICROCEPHALY 17, PRIMARY, AUTOSOMAL RECESSIVE; MCPH17 - OMIM
# 617090

MICROCEPHALY 17, PRIMARY, AUTOSOMAL RECESSIVE; MCPH17


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
12q24.23 Microcephaly 17, primary, autosomal recessive 617090 AR 3 CIT 605629
Clinical Synopsis
 
Phenotypic Series
 

INHERITANCE
- Autosomal recessive
GROWTH
Height
- Short stature
Other
- Failure to thrive
HEAD & NECK
Head
- Microcephaly (up to -11 SD)
Face
- Sloping forehead
Ears
- Large ears
Eyes
- Hypertelorism
Nose
- Bulbous nose
Mouth
- Thick lips
GENITOURINARY
Kidneys
- Renal aplasia (2 families)
MUSCLE, SOFT TISSUES
- Hypotonia, axial
NEUROLOGIC
Central Nervous System
- Delayed psychomotor development
- Intellectual disability
- Mental retardation
- Spasticity
- Hypertonia of the limbs
- Hyperreflexia
- Seizures (rare)
- Simplified gyral pattern
- Microlissencephaly
- Enlarged ventricles
- Agenesis of the corpus callosum
- Brainstem hypoplasia
- Cerebellar hypoplasia
- Abnormal lamination
- Multinucleated neurons
MISCELLANEOUS
- Onset in utero
- Variable severity
- Some patients may die in infancy or early childhood
MOLECULAR BASIS
- Caused by mutation in the citron RHO-interacting serine/threonine kinase gene (CIT, 605629.0001)
Microcephaly, primary - PS251200 - 30 Entries
Location Phenotype Inheritance Phenotype
mapping key
Phenotype
MIM number
Gene/Locus Gene/Locus
MIM number
1p34.2 Neurodevelopmental disorder with progressive microcephaly, spasticity, and brain abnormalities AR 3 616486 MFSD2A 614397
1p33 Microcephaly 7, primary, autosomal recessive AR 3 612703 STIL 181590
1p21.2 Microcephaly 14, primary, autosomal recessive AR 3 616402 SASS6 609321
1q31.3 Microcephaly 5, primary, autosomal recessive AR 3 608716 ASPM 605481
1q32.1 Microcephaly 20, primary, autosomal recessive AR 3 617914 KIF14 611279
2q11.2 ?Microcephaly 23, primary, autosomal recessive AR 3 617985 NCAPH 602332
2q13 Microcephaly 30, primary, autosomal recessive AR 3 620183 BUB1 602452
3p22.3 ?Microcephaly 29, primary, autosomal recessive AR 3 620047 PDCD6IP 608074
3q23 ?Microcephaly 19, primary, autosomal recessive AR 3 617800 COPB2 606990
4q12 Microcephaly 8, primary, autosomal recessive AR 3 614673 CEP135 611423
4q21.23 ?Microcephaly 18, primary, autosomal dominant AD 3 617520 WDFY3 617485
4q24 ?Microcephaly 13, primary, autosomal recessive AR 3 616051 CENPE 117143
5q23.2 Microcephaly 26, primary, autosomal dominant AD 3 619179 LMNB1 150340
7q21.2 ?Microcephaly 12, primary, autosomal recessive AR 3 616080 CDK6 603368
7q22.1 ?Microcephaly 25, primary, autosomal recessive AR 3 618351 MAP11 618350
8p23.1 Microcephaly 1, primary, autosomal recessive AR 3 251200 MCPH1 607117
9q33.2 Microcephaly 3, primary, autosomal recessive AR 3 604804 CDK5RAP2 608201
11q25 Microcephaly 22, primary, autosomal recessive AR 3 617984 NCAPD3 609276
12p13.31 ?Microcephaly 21, primary, autosomal recessive AR 3 617983 NCAPD2 615638
12p13.31 ?Microcephaly 11, primary, autosomal recessive AR 3 615414 PHC1 602978
12q23.2 ?Microcephaly 24, primary, autosomal recessive AR 3 618179 NUP37 609264
12q24.23 Microcephaly 17, primary, autosomal recessive AR 3 617090 CIT 605629
12q24.33 Microcephaly 16, primary, autosomal recessive AR 3 616681 ANKLE2 616062
13q12.12-q12.13 Microcephaly 6, primary, autosomal recessive AR 3 608393 CENPJ 609279
15q15.1 Microcephaly 4, primary, autosomal recessive AR 3 604321 KNL1 609173
15q21.1 Microcephaly 9, primary, autosomal recessive AR 3 614852 CEP152 613529
19p13.3 Microcephaly 27, primary, autosomal dominant AD 3 619180 LMNB2 150341
19q13.12 Microcephaly 2, primary, autosomal recessive, with or without cortical malformations AR 3 604317 WDR62 613583
20q13.12 Microcephaly 10, primary, autosomal recessive AR 3 615095 ZNF335 610827
22q13.2 ?Microcephaly 28, primary, autosomal recessive AR 3 619453 RRP7A 619449

TEXT

A number sign (#) is used with this entry because of evidence that autosomal recessive primary microcephaly-17 (MCPH17) is caused by homozygous or compound heterozygous mutation in the CIT gene (605629) on chromosome 12q24.


Description

Autosomal recessive primary microcephaly-17 (MCPH17) is a severe neurologic disorder characterized by very small head circumference that is apparent at birth and worsens over time (up to -12 SD). Affected individuals have delayed psychomotor development, intellectual disability, spasticity, axial hypotonia, and dysmorphic features. Brain imaging shows a simplified gyral pattern; more severe cases have lissencephaly with hypoplasia of the brainstem and cerebellum (summary by Harding et al., 2016).

For a phenotypic description and a discussion of genetic heterogeneity of primary microcephaly, see MCPH1 (251200).


Clinical Features

Li et al. (2016) reported 8 children from 3 unrelated consanguineous families with primary microcephaly. Within the first few years of life, the head circumferences ranged from -5.6 to -8.4 SD. Dysmorphic features included sloping forehead, tubular nose, full lips and cheeks, and large ears. The patients were also noted to have short stature. All patients had delayed psychomotor development with intellectual disability and poor speech. Most had mild hypertonia and hyperreflexia; 1 had severe arthrogryposis. Brain imaging, when performed, showed a simplified gyral pattern and hypogenesis of the corpus callosum.

Harding et al. (2016) reported 6 patients from 3 unrelated families with severe MCPH17 associated with lissencephaly. Four of the patients died in the newborn period. Head circumference, when measured, ranged from -6.5 to -12 SD. The patients who survived showed axial hypotonia and limb hypertonia, delayed development, and dysmorphic facial features, including sloping forehead, large ears, and broad nasal bridge. Brain imaging and/or postmortem examination showed microlissencephaly, agenesis of the corpus callosum, enlarged ventricles, and hypoplasia of the cerebellum and brainstem. Postmortem examination of 1 patient showed a thick cortex, cytologic and organizational abnormalities, and multinucleated neurons, consistent with a defect in cytokinesis during neurodevelopment. In 1 family (family B) of Arab descent, both the proband and an affected deceased sib had renal aplasia or agenesis. The proband in the third family (family C), of French descent, had a slightly less severe phenotype. At age 10 years, he had a head circumference of -6.5 SD, moderate to severe intellectual disability, and mild autistic features.

Basit et al. (2016) reported a consanguineous Saudi family in which 4 sibs, including twins, had MCPH17. They had decreased head circumference (-3 to -6 SD), sloping forehead, mental retardation, and simplified gyral pattern on brain imaging.

Shaheen et al. (2016) reported 2 unrelated children, born of consanguineous Arab parents, with MCPH17. In the first family, ultrasound of the proband at 30 weeks' gestation showed polyhydramnios, intrauterine growth retardation, microcephaly, and absent left kidney. At age 4 months, she had severe microcephaly (-10 SD), short stature, and severe hypertonia with flexion contractures of upper and lower extremities. There was no history of seizures. She died at the age of 5 months; postmortem examination was not performed. The other child was a 6-year-old girl who was noted at birth to have severe microcephaly (-4.6 SD). At age 5 months she developed well-controlled seizures. She continued to have a small head circumference (up to -9 SD), poor overall growth, hypertonia, and spasticity. Brain MRI showed agenesis of corpus callosum, dilated ventricles, diminished white matter, and lissencephaly.


Inheritance

The transmission pattern of MCPH17 in the families reported by Li et al. (2016) was consistent with autosomal recessive inheritance.


Molecular Genetics

In 8 patients from 3 unrelated consanguineous families with MCPH17, Li et al. (2016) identified 3 different homozygous missense mutations in the CIT gene (605629.0001-605629.0003). The mutations were found by whole-exome sequencing and segregated with the disorder in the families. In vitro functional expression studies showed that the mutant proteins had no detectable kinase activity, consistent with a loss of function. Patient fibroblasts showed no defects in cell proliferation or mitosis, but patient-derived induced neural progenitor cells showed abnormal cytokinesis with delayed mitosis, cellular blebbing, multipolar spindles, and increased apoptosis. These cellular defects were rescued by expression of the wildtype allele. The findings suggested that this form of microcephaly is caused by impaired cytokinesis, which results in genome instability, genotoxic stress, apoptosis, and subsequently, reduced cerebral volume.

In 3 probands with MCPH17, Harding et al. (2016) identified homozygous or compound heterozygous mutations in the CIT gene (see, e.g., 605629.0004-605629.0005). Two probands, born of consanguineous families of Arab descent (families A and B), had homozygous truncating mutations in the CIT gene. The proband in the third family (family C), of French descent, was compound heterozygous for a truncating mutation and a missense mutation; this patient had a slightly less severe phenotype. Harding et al. (2016) noted the phenotypic similarities to the Cit-null mouse (see ANIMAL MODEL).

In 2 unrelated children, born of consanguineous Arab parents, with MCPH17, Shaheen et al. (2016) identified 2 homozygous mutations in the CIT gene (605629.0004 and 605629.0006). The mutations, which were found by a combination of autozygosity mapping and exome sequencing, segregated with the disorder in the families. Both mutations affected the kinase domain.

In 4 sibs, born of consanguineous Saudi parents, with MCPH17, Basit et al. (2016) identified a homozygous splice site mutation in the CIT gene (605629.0006).


Animal Model

Di Cunto et al. (2000) generated mice deficient in citron kinase by targeted disruption. Citron-K -/- mice grow at slower rates, are severely ataxic, and die before adulthood as a consequence of fatal seizures. Their brains display defective neurogenesis, with dramatic depletion of microneurons in the olfactory bulb, hippocampus, and cerebellum. These abnormalities arise during development of the central nervous system due to altered cytokinesis and massive apoptosis. Di Cunto et al. (2000) concluded that citron-K is essential for cytokinesis in vivo, in specific neuronal precursors only. Moreover, they suggested a novel molecular mechanism for a subset of human malformation syndromes of the central nervous system.


REFERENCES

  1. Basit, S., Al-Harbi, K. M., Alhijji, S. A. M., Albalawi, A. M., Alharby, E., Eldardear, A., Samman, M. I. CIT, a gene involved in neurogenic cytokinesis, is mutated in human primary microcephaly. Hum. Genet. 135: 1199-1207, 2016. [PubMed: 27519304, related citations] [Full Text]

  2. Di Cunto, F., Imarisio, S., Hirsch, E., Broccoli, V., Bulfone, A., Migheli, A., Atzori, C., Turco, E., Triolo, R., Dotto, G. P., Silengo, L., Altruda, F. Defective neurogenesis in citron kinase knockout mice by altered cytokinesis and massive apoptosis. Neuron 28: 115-127, 2000. [PubMed: 11086988, related citations] [Full Text]

  3. Harding, B. N., Moccia, A., Drunat, S., Soukarieh, O., Tubeuf, H., Chitty, L. S., Verloes, A., Gressens, P., El Ghouzzi, V., Joriot, S., Di Cunto, F., Martins, A., Passemard, S., Bielas, S. L. Mutations in citron kinase cause recessive microlissencephaly with multinucleated neurons. Am. J. Hum. Genet. 99: 511-520, 2016. [PubMed: 27453579, images, related citations] [Full Text]

  4. Li, H., Bielas, S. L., Zaki, M. S., Ismail, S., Farfara, D., Um, K., Rosti, R. O., Scott, E. C., Tu, S., Chi, N. C., Gabriel, S., Erson-Omay, E. Z., Ercan-Sencicek, A. G., Yasuno, K., Caglayan, A. O., Kaymakcalan, H., Ekici, B., Bilguvar, K., Gunel, M., Gleeson, J. G. Biallelic mutations in citron kinase link mitotic cytokinesis to human primary microcephaly. Am. J. Hum. Genet. 99: 501-510, 2016. [PubMed: 27453578, images, related citations] [Full Text]

  5. Shaheen, R., Hashem, A., Abdel-Salam, G. M. H., Al-Fadhli, F., Ewida, N., Alkuraya, F. S. Mutations in CIT, encoding citron rho-interacting serine/threonine kinase, cause severe primary microcephaly in humans. Hum. Genet. 135: 1191-1197, 2016. [PubMed: 27503289, related citations] [Full Text]


Creation Date:
Cassandra L. Kniffin : 08/24/2016
carol : 08/03/2020
alopez : 10/25/2016
alopez : 09/02/2016
ckniffin : 08/25/2016

# 617090

MICROCEPHALY 17, PRIMARY, AUTOSOMAL RECESSIVE; MCPH17


ORPHA: 2512;   DO: 0070288;  


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
12q24.23 Microcephaly 17, primary, autosomal recessive 617090 Autosomal recessive 3 CIT 605629

TEXT

A number sign (#) is used with this entry because of evidence that autosomal recessive primary microcephaly-17 (MCPH17) is caused by homozygous or compound heterozygous mutation in the CIT gene (605629) on chromosome 12q24.


Description

Autosomal recessive primary microcephaly-17 (MCPH17) is a severe neurologic disorder characterized by very small head circumference that is apparent at birth and worsens over time (up to -12 SD). Affected individuals have delayed psychomotor development, intellectual disability, spasticity, axial hypotonia, and dysmorphic features. Brain imaging shows a simplified gyral pattern; more severe cases have lissencephaly with hypoplasia of the brainstem and cerebellum (summary by Harding et al., 2016).

For a phenotypic description and a discussion of genetic heterogeneity of primary microcephaly, see MCPH1 (251200).


Clinical Features

Li et al. (2016) reported 8 children from 3 unrelated consanguineous families with primary microcephaly. Within the first few years of life, the head circumferences ranged from -5.6 to -8.4 SD. Dysmorphic features included sloping forehead, tubular nose, full lips and cheeks, and large ears. The patients were also noted to have short stature. All patients had delayed psychomotor development with intellectual disability and poor speech. Most had mild hypertonia and hyperreflexia; 1 had severe arthrogryposis. Brain imaging, when performed, showed a simplified gyral pattern and hypogenesis of the corpus callosum.

Harding et al. (2016) reported 6 patients from 3 unrelated families with severe MCPH17 associated with lissencephaly. Four of the patients died in the newborn period. Head circumference, when measured, ranged from -6.5 to -12 SD. The patients who survived showed axial hypotonia and limb hypertonia, delayed development, and dysmorphic facial features, including sloping forehead, large ears, and broad nasal bridge. Brain imaging and/or postmortem examination showed microlissencephaly, agenesis of the corpus callosum, enlarged ventricles, and hypoplasia of the cerebellum and brainstem. Postmortem examination of 1 patient showed a thick cortex, cytologic and organizational abnormalities, and multinucleated neurons, consistent with a defect in cytokinesis during neurodevelopment. In 1 family (family B) of Arab descent, both the proband and an affected deceased sib had renal aplasia or agenesis. The proband in the third family (family C), of French descent, had a slightly less severe phenotype. At age 10 years, he had a head circumference of -6.5 SD, moderate to severe intellectual disability, and mild autistic features.

Basit et al. (2016) reported a consanguineous Saudi family in which 4 sibs, including twins, had MCPH17. They had decreased head circumference (-3 to -6 SD), sloping forehead, mental retardation, and simplified gyral pattern on brain imaging.

Shaheen et al. (2016) reported 2 unrelated children, born of consanguineous Arab parents, with MCPH17. In the first family, ultrasound of the proband at 30 weeks' gestation showed polyhydramnios, intrauterine growth retardation, microcephaly, and absent left kidney. At age 4 months, she had severe microcephaly (-10 SD), short stature, and severe hypertonia with flexion contractures of upper and lower extremities. There was no history of seizures. She died at the age of 5 months; postmortem examination was not performed. The other child was a 6-year-old girl who was noted at birth to have severe microcephaly (-4.6 SD). At age 5 months she developed well-controlled seizures. She continued to have a small head circumference (up to -9 SD), poor overall growth, hypertonia, and spasticity. Brain MRI showed agenesis of corpus callosum, dilated ventricles, diminished white matter, and lissencephaly.


Inheritance

The transmission pattern of MCPH17 in the families reported by Li et al. (2016) was consistent with autosomal recessive inheritance.


Molecular Genetics

In 8 patients from 3 unrelated consanguineous families with MCPH17, Li et al. (2016) identified 3 different homozygous missense mutations in the CIT gene (605629.0001-605629.0003). The mutations were found by whole-exome sequencing and segregated with the disorder in the families. In vitro functional expression studies showed that the mutant proteins had no detectable kinase activity, consistent with a loss of function. Patient fibroblasts showed no defects in cell proliferation or mitosis, but patient-derived induced neural progenitor cells showed abnormal cytokinesis with delayed mitosis, cellular blebbing, multipolar spindles, and increased apoptosis. These cellular defects were rescued by expression of the wildtype allele. The findings suggested that this form of microcephaly is caused by impaired cytokinesis, which results in genome instability, genotoxic stress, apoptosis, and subsequently, reduced cerebral volume.

In 3 probands with MCPH17, Harding et al. (2016) identified homozygous or compound heterozygous mutations in the CIT gene (see, e.g., 605629.0004-605629.0005). Two probands, born of consanguineous families of Arab descent (families A and B), had homozygous truncating mutations in the CIT gene. The proband in the third family (family C), of French descent, was compound heterozygous for a truncating mutation and a missense mutation; this patient had a slightly less severe phenotype. Harding et al. (2016) noted the phenotypic similarities to the Cit-null mouse (see ANIMAL MODEL).

In 2 unrelated children, born of consanguineous Arab parents, with MCPH17, Shaheen et al. (2016) identified 2 homozygous mutations in the CIT gene (605629.0004 and 605629.0006). The mutations, which were found by a combination of autozygosity mapping and exome sequencing, segregated with the disorder in the families. Both mutations affected the kinase domain.

In 4 sibs, born of consanguineous Saudi parents, with MCPH17, Basit et al. (2016) identified a homozygous splice site mutation in the CIT gene (605629.0006).


Animal Model

Di Cunto et al. (2000) generated mice deficient in citron kinase by targeted disruption. Citron-K -/- mice grow at slower rates, are severely ataxic, and die before adulthood as a consequence of fatal seizures. Their brains display defective neurogenesis, with dramatic depletion of microneurons in the olfactory bulb, hippocampus, and cerebellum. These abnormalities arise during development of the central nervous system due to altered cytokinesis and massive apoptosis. Di Cunto et al. (2000) concluded that citron-K is essential for cytokinesis in vivo, in specific neuronal precursors only. Moreover, they suggested a novel molecular mechanism for a subset of human malformation syndromes of the central nervous system.


REFERENCES

  1. Basit, S., Al-Harbi, K. M., Alhijji, S. A. M., Albalawi, A. M., Alharby, E., Eldardear, A., Samman, M. I. CIT, a gene involved in neurogenic cytokinesis, is mutated in human primary microcephaly. Hum. Genet. 135: 1199-1207, 2016. [PubMed: 27519304] [Full Text: https://doi.org/10.1007/s00439-016-1724-0]

  2. Di Cunto, F., Imarisio, S., Hirsch, E., Broccoli, V., Bulfone, A., Migheli, A., Atzori, C., Turco, E., Triolo, R., Dotto, G. P., Silengo, L., Altruda, F. Defective neurogenesis in citron kinase knockout mice by altered cytokinesis and massive apoptosis. Neuron 28: 115-127, 2000. [PubMed: 11086988] [Full Text: https://doi.org/10.1016/s0896-6273(00)00090-8]

  3. Harding, B. N., Moccia, A., Drunat, S., Soukarieh, O., Tubeuf, H., Chitty, L. S., Verloes, A., Gressens, P., El Ghouzzi, V., Joriot, S., Di Cunto, F., Martins, A., Passemard, S., Bielas, S. L. Mutations in citron kinase cause recessive microlissencephaly with multinucleated neurons. Am. J. Hum. Genet. 99: 511-520, 2016. [PubMed: 27453579] [Full Text: https://doi.org/10.1016/j.ajhg.2016.07.003]

  4. Li, H., Bielas, S. L., Zaki, M. S., Ismail, S., Farfara, D., Um, K., Rosti, R. O., Scott, E. C., Tu, S., Chi, N. C., Gabriel, S., Erson-Omay, E. Z., Ercan-Sencicek, A. G., Yasuno, K., Caglayan, A. O., Kaymakcalan, H., Ekici, B., Bilguvar, K., Gunel, M., Gleeson, J. G. Biallelic mutations in citron kinase link mitotic cytokinesis to human primary microcephaly. Am. J. Hum. Genet. 99: 501-510, 2016. [PubMed: 27453578] [Full Text: https://doi.org/10.1016/j.ajhg.2016.07.004]

  5. Shaheen, R., Hashem, A., Abdel-Salam, G. M. H., Al-Fadhli, F., Ewida, N., Alkuraya, F. S. Mutations in CIT, encoding citron rho-interacting serine/threonine kinase, cause severe primary microcephaly in humans. Hum. Genet. 135: 1191-1197, 2016. [PubMed: 27503289] [Full Text: https://doi.org/10.1007/s00439-016-1722-2]


Creation Date:
Cassandra L. Kniffin : 08/24/2016

Edit History:
carol : 08/03/2020
alopez : 10/25/2016
alopez : 09/02/2016
ckniffin : 08/25/2016