My Bibliography

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Moncada-Diaz MJ, Rodríguez-Almonacid CC, Quiceno-Giraldo E, Khuong FTH, Muskus C, Karamysheva ZN. Molecular Mechanisms of Drug Resistance in Leishmania spp. Pathogens. 2024 Sep 27;13(10). doi: 10.3390/pathogens13100835. Review. PubMed PMID: 39452707; PubMed Central PMCID: PMC11510721.

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Gutierrez Guarnizo SA, Kellogg MK, Miller SC, Tikhonova EB, Karamysheva ZN, Karamyshev AL. Pathogenic signal peptide variants in the human genome. NAR Genom Bioinform. 2023 Dec;5(4):lqad093. doi: 10.1093/nargab/lqad093. eCollection 2023 Dec. PubMed PMID: 37859801; PubMed Central PMCID: PMC10583284.

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Tarannum A, Rodríguez-Almonacid CC, Salazar-Bravo J, Karamysheva ZN. Molecular Mechanisms of Persistence in Protozoan Parasites. Microorganisms. 2023 Sep 7;11(9). doi: 10.3390/microorganisms11092248. Review. PubMed PMID: 37764092; PubMed Central PMCID: PMC10534552.

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Gutierrez Guarnizo SA, Tikhonova EB, Karamyshev AL, Muskus CE, Karamysheva ZN. Translational reprogramming as a driver of antimony-drug resistance in Leishmania. Nat Commun. 2023 May 5;14(1):2605. doi: 10.1038/s41467-023-38221-1. PubMed PMID: 37147291; PubMed Central PMCID: PMC10163012.

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Rodríguez-Almonacid CC, Kellogg MK, Karamyshev AL, Karamysheva ZN. Ribosome Specialization in Protozoa Parasites. Int J Mol Sci. 2023 Apr 19;24(8). doi: 10.3390/ijms24087484. Review. PubMed PMID: 37108644; PubMed Central PMCID: PMC10138883.

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Miller SC, MacDonald CC, Kellogg MK, Karamysheva ZN, Karamyshev AL. Specialized Ribosomes in Health and Disease. Int J Mol Sci. 2023 Mar 28;24(7). doi: 10.3390/ijms24076334. Review. PubMed PMID: 37047306; PubMed Central PMCID: PMC10093926.

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Karamysheva ZN, Karamyshev AL. Aberrant protein targeting activates quality control on the ribosome. Front Cell Dev Biol. 2023;11:1198184. doi: 10.3389/fcell.2023.1198184. eCollection 2023. PubMed PMID: 37346176; PubMed Central PMCID: PMC10279951.

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Tikhonova EB, Gutierrez Guarnizo SA, Kellogg MK, Karamyshev A, Dozmorov IM, Karamysheva ZN, Karamyshev AL. Defective Human SRP Induces Protein Quality Control and Triggers Stress Response. J Mol Biol. 2022 Nov 30;434(22):167832. doi: 10.1016/j.jmb.2022.167832. Epub 2022 Sep 19. PubMed PMID: 36210597; PubMed Central PMCID: PMC10024925.

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Karamysheva ZN, Moitra S, Perez A, Mukherjee S, Tikhonova EB, Karamyshev AL, Zhang K. Unexpected Role of Sterol Synthesis in RNA Stability and Translation in Leishmania. Biomedicines. 2021 Jun 19;9(6). doi: 10.3390/biomedicines9060696. PubMed PMID: 34205466; PubMed Central PMCID: PMC8235615.

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Gutierrez Guarnizo SA, Karamysheva ZN, Galeano E, Muskus CE. Metabolite Biomarkers of Leishmania Antimony Resistance. Cells. 2021 Apr 30;10(5). doi: 10.3390/cells10051063. PubMed PMID: 33946139; PubMed Central PMCID: PMC8146733.

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Gutierrez Guarnizo SA, Tikhonova EB, Zabet-Moghaddam M, Zhang K, Muskus C, Karamyshev AL, Karamysheva ZN. Drug-Induced Lipid Remodeling in Leishmania Parasites. Microorganisms. 2021 Apr 9;9(4). doi: 10.3390/microorganisms9040790. PubMed PMID: 33918954; PubMed Central PMCID: PMC8068835.

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Karamysheva ZN, Gutierrez Guarnizo SA, Karamyshev AL. Regulation of Translation in the Protozoan Parasite Leishmania. Int J Mol Sci. 2020 Apr 23;21(8). doi: 10.3390/ijms21082981. Review. PubMed PMID: 32340274; PubMed Central PMCID: PMC7215931.

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Karamyshev AL, Tikhonova EB, Karamysheva ZN. Translational Control of Secretory Proteins in Health and Disease. Int J Mol Sci. 2020 Apr 6;21(7). doi: 10.3390/ijms21072538. Review. PubMed PMID: 32268488; PubMed Central PMCID: PMC7177344.

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Tikhonova EB, Karamysheva ZN, von Heijne G, Karamyshev AL. Silencing of Aberrant Secretory Protein Expression by Disease-Associated Mutations. J Mol Biol. 2019 Jun 28;431(14):2567-2580. doi: 10.1016/j.jmb.2019.05.011. Epub 2019 May 14. PubMed PMID: 31100385; PubMed Central PMCID: PMC6684239.

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Karamysheva ZN, Tikhonova EB, Karamyshev AL. Granulin in Frontotemporal Lobar Degeneration: Molecular Mechanisms of the Disease. Front Neurosci. 2019;13:395. doi: 10.3389/fnins.2019.00395. eCollection 2019. PubMed PMID: 31105517; PubMed Central PMCID: PMC6494926.

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Karamysheva ZN, Tikhonova EB, Grozdanov PN, Huffman JC, Baca KR, Karamyshev A, Denison RB, MacDonald CC, Zhang K, Karamyshev AL. Polysome Profiling in Leishmania, Human Cells and Mouse Testis. J Vis Exp. 2018 Apr 8;(134). doi: 10.3791/57600. PubMed PMID: 29683462; PubMed Central PMCID: PMC5933418.

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Karamyshev AL, Karamysheva ZN. Lost in Translation: Ribosome-Associated mRNA and Protein Quality Controls. Front Genet. 2018;9:431. doi: 10.3389/fgene.2018.00431. eCollection 2018. Review. PubMed PMID: 30337940; PubMed Central PMCID: PMC6180196.

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Dutta AK, Khimji AK, Liu S, Karamysheva Z, Fujita A, Kresge C, Rockey DC, Feranchak AP. PKCα regulates TMEM16A-mediated Cl⁻ secretion in human biliary cells. Am J Physiol Gastrointest Liver Physiol. 2016 Jan 1;310(1):G34-42. doi: 10.1152/ajpgi.00146.2015. Epub 2015 Nov 5. PubMed PMID: 26542395; PubMed Central PMCID: PMC4698437.

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Karamysheva Z, Díaz-Martínez LA, Warrington R, Yu H. Graded requirement for the spliceosome in cell cycle progression. Cell Cycle. 2015;14(12):1873-83. doi: 10.1080/15384101.2015.1039209. PubMed PMID: 25892155; PubMed Central PMCID: PMC4614359.

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Díaz-Martínez LA, Karamysheva ZN, Warrington R, Li B, Wei S, Xie XJ, Roth MG, Yu H. Genome-wide siRNA screen reveals coupling between mitotic apoptosis and adaptation. EMBO J. 2014 Sep 1;33(17):1960-76. doi: 10.15252/embj.201487826. Epub 2014 Jul 14. PubMed PMID: 25024437; PubMed Central PMCID: PMC4195789.

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Karamyshev AL, Patrick AE, Karamysheva ZN, Griesemer DS, Hudson H, Tjon-Kon-Sang S, Nilsson I, Otto H, Liu Q, Rospert S, von Heijne G, Johnson AE, Thomas PJ. Inefficient SRP interaction with a nascent chain triggers a mRNA quality control pathway. Cell. 2014 Jan 16;156(1-2):146-57. doi: 10.1016/j.cell.2013.12.017. PubMed PMID: 24439374; PubMed Central PMCID: PMC3931426.

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Karamysheva Z, Diaz-Martinez LA, Crow SE, Li B, Yu H. Multiple anaphase-promoting complex/cyclosome degrons mediate the degradation of human Sgo1. J Biol Chem. 2009 Jan 16;284(3):1772-80. doi: 10.1074/jbc.M807083200. Epub 2008 Nov 17. PubMed PMID: 19015261; PubMed Central PMCID: PMC2615523.

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Karamyshev AL, Karamysheva ZN, Yamami T, Ito K, Nakamura Y. Transient idling of posttermination ribosomes ready to reinitiate protein synthesis. Biochimie. 2004 Dec;86(12):933-8. doi: 10.1016/j.biochi.2004.08.006. PubMed PMID: 15667944.

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Karamysheva ZN, Surovtseva YV, Vespa L, Shakirov EV, Shippen DE. A C-terminal Myb extension domain defines a novel family of double-strand telomeric DNA-binding proteins in Arabidopsis. J Biol Chem. 2004 Nov 12;279(46):47799-807. doi: 10.1074/jbc.M407938200. Epub 2004 Sep 10. PubMed PMID: 15364931.

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Karamysheva ZN, Karamyshev AL, Ito K, Yokogawa T, Nishikawa K, Nakamura Y, Matsufuji S. Antizyme frameshifting as a functional probe of eukaryotic translational termination. Nucleic Acids Res. 2003 Oct 15;31(20):5949-56. doi: 10.1093/nar/gkg789. PubMed PMID: 14530443; PubMed Central PMCID: PMC219470.

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Karamysheva Z, Wang L, Shrode T, Bednenko J, Hurley LA, Shippen DE. Developmentally programmed gene elimination in Euplotes crassus facilitates a switch in the telomerase catalytic subunit. Cell. 2003 May 30;113(5):565-76. doi: 10.1016/s0092-8674(03)00363-5. PubMed PMID: 12787498.

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Ray S, Karamysheva Z, Wang L, Shippen DE, Price CM. Interactions between telomerase and primase physically link the telomere and chromosome replication machinery. Mol Cell Biol. 2002 Aug;22(16):5859-68. doi: 10.1128/MCB.22.16.5859-5868.2002. PubMed PMID: 12138196; PubMed Central PMCID: PMC133977.

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Karamyshev AL, Karamysheva ZN, Ito K, Matsufuji S, Nakamura Y. Overexpression and purification of recombinant eRF1 proteins of rabbit and Tetrahymena thermophila. Biochemistry (Mosc). 1999 Dec;64(12):1391-400. PubMed PMID: 10648963.

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Kalinin AE, Mikhaleva NI, Karamyshev AL, Karamysheva ZN, Nesmeyanova MA. Interaction of mutant alkaline phosphatase precursors with membrane phospholipids in vivo and in vitro. Biochemistry (Mosc). 1999 Sep;64(9):1021-9. PubMed PMID: 10521719.

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Karamyshev AL, Karamysheva ZN, Kajava AV, Ksenzenko VN, Nesmeyanova MA. Processing of Escherichia coli alkaline phosphatase: role of the primary structure of the signal peptide cleavage region. J Mol Biol. 1998 Apr 10;277(4):859-70. doi: 10.1006/jmbi.1997.1617. PubMed PMID: 9545377.

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Karamysheva ZN, Karamyshev AL, Ksenzenko VN, Shliapnikov MG, Kaiava AV, Nesmeianova MA. [Biogenesis and secretion of alkaline phosphatase and its mutant forms in Escherichia coli. IV. Substitution of amino acids in the C-terminal domain of the alkaline phosphatase signal peptide affects the effectiveness of processing this protein]. Mol Biol (Mosk). 1997 Sep-Oct;31(5):901-8. PubMed PMID: 9454077.

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Nesmeyanova MA, Karamyshev AL, Karamysheva ZN, Kalinin AE, Ksenzenko VN, Kajava AV. Positively charged lysine at the N-terminus of the signal peptide of the Escherichia coli alkaline phosphatase provides the secretion efficiency and is involved in the interaction with anionic phospholipids. FEBS Lett. 1997 Feb 17;403(2):203-7. doi: 10.1016/s0014-5793(97)00052-5. PubMed PMID: 9042967.

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Karamysheva ZN, Karamyshev AL, Ksenzenko VN, Nesmeianova MA. [Analysis of the effect of replacing Lys(-20) in the alkaline phosphatase signal peptide on secretion of this enzyme]. Biokhimiia. 1996 Apr;61(4):745-54. PubMed PMID: 8724791.

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Kulakovskaya TV, Karamysheva ZN, Andreeva NA, Golubev VI. Some characteristics of mycocin produced by Cystofilobasidium bisporidii. Russia: Mikrobiologiya; 1996.

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Karamysheva ZN, Ksenzenko VN, Golubev VI, Ratner EN, Tikhomirova LP. [Characteristics of viruses in the BKM Y-2700 mycocinogenic strain of Cystofilobasidium bisporidii yeasts]. Dokl Akad Nauk. 1993 Jul;331(3):376-8. PubMed PMID: 8364391.