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Colonization

MedGen UID:
927299
Concept ID:
C4289767
Finding
 

Definition

The presence of microorganisms (not contamination) on a body surface, including the skin and mucosal surfaces (e.g., respiratory, gastrointestinal, and urogenital tracts). Colonization implies the lack of signs or symptoms of infection but often precedes infection. [from NCI]

Term Hierarchy

CClinical test,  RResearch test,  OOMIM,  GGeneReviews,  VClinVar  
  • CROGVColonization

Recent clinical studies

Etiology

Yan D, Chen Y, Lv T, Huang Y, Yang J, Li Y, Huang J, Li L
J Med Microbiol 2017 Oct;66(10):1483-1488. Epub 2017 Sep 25 doi: 10.1099/jmm.0.000596. PMID: 28945189
Cheikh A, Belefquih B, Chajai Y, Cheikhaoui Y, El Hassani A, Benouda A
BMC Infect Dis 2017 Mar 29;17(1):237. doi: 10.1186/s12879-017-2346-4. PMID: 28356079Free PMC Article
Biobaku Oluwafunmilola R, Olaleye Atinuke O, Adefusi Olorunwa F, Adeyemi Babalola A, Onipede Anthony O, Loto Olabisi M, Imaralu John O
J Neonatal Perinatal Med 2017;10(1):91-97. doi: 10.3233/NPM-1685. PMID: 28304326
Tsai MH, Chiu CY, Shih HJ, Liao SL, Hua MC, Huang SH, Yao TC, Lai SH, Huang TS, Yeh KW, Chen LC, Su KW, Lim WH, Chang YJ, Chiang CH, Huang SY, Huang JL
Clin Microbiol Infect 2017 Feb;23(2):121.e1-121.e7. Epub 2016 Oct 26 doi: 10.1016/j.cmi.2016.10.020. PMID: 27793735
Kim JY, Sung JH, Chang KH, Choi SJ, Oh SY, Roh CR, Kim JH
J Matern Fetal Neonatal Med 2017 Mar;30(5):556-561. Epub 2016 May 5 doi: 10.1080/14767058.2016.1177819. PMID: 27072161

Diagnosis

McConville TH, Sullivan SB, Gomez-Simmonds A, Whittier S, Uhlemann AC
PLoS One 2017;12(10):e0186195. Epub 2017 Oct 12 doi: 10.1371/journal.pone.0186195. PMID: 29023567Free PMC Article
Cheikh A, Belefquih B, Chajai Y, Cheikhaoui Y, El Hassani A, Benouda A
BMC Infect Dis 2017 Mar 29;17(1):237. doi: 10.1186/s12879-017-2346-4. PMID: 28356079Free PMC Article
Biobaku Oluwafunmilola R, Olaleye Atinuke O, Adefusi Olorunwa F, Adeyemi Babalola A, Onipede Anthony O, Loto Olabisi M, Imaralu John O
J Neonatal Perinatal Med 2017;10(1):91-97. doi: 10.3233/NPM-1685. PMID: 28304326
Ismi O, Ozcan C, Vayısoğlu Y, Öztürk C, Tek SA, Görür K
Eur Arch Otorhinolaryngol 2017 May;274(5):2189-2195. Epub 2017 Feb 20 doi: 10.1007/s00405-017-4479-x. PMID: 28220309
Stulik L, Hudcova J, Craven DE, Nagy G, Nagy E
Clin Infect Dis 2017 Apr 15;64(8):1081-1088. doi: 10.1093/cid/cix055. PMID: 28158685

Therapy

Biobaku Oluwafunmilola R, Olaleye Atinuke O, Adefusi Olorunwa F, Adeyemi Babalola A, Onipede Anthony O, Loto Olabisi M, Imaralu John O
J Neonatal Perinatal Med 2017;10(1):91-97. doi: 10.3233/NPM-1685. PMID: 28304326
Kobayashi M, Conklin LM, Bigogo G, Jagero G, Hampton L, Fleming-Dutra KE, Junghae M, Carvalho MD, Pimenta F, Beall B, Taylor T, Laserson KF, Vulule J, Van Beneden C, Kim L, Feikin DR, Whitney CG, Breiman RF
BMC Infect Dis 2017 Jan 5;17(1):25. doi: 10.1186/s12879-016-2103-0. PMID: 28056828Free PMC Article
Senanayake EL, Giri R, Gopal S, Nevill A, Luckraz H
J Hosp Infect 2017 Jan;95(1):81-86. Epub 2016 Sep 16 doi: 10.1016/j.jhin.2016.09.007. PMID: 27837930
Kim JY, Sung JH, Chang KH, Choi SJ, Oh SY, Roh CR, Kim JH
J Matern Fetal Neonatal Med 2017 Mar;30(5):556-561. Epub 2016 May 5 doi: 10.1080/14767058.2016.1177819. PMID: 27072161
Befus MB, Miko BA, Herzig CT, Keleekai N, Mukherjee DV, Larson E, Lowy FD
J Infect 2016 Dec;73(6):568-577. Epub 2016 Sep 1 doi: 10.1016/j.jinf.2016.08.016. PMID: 27592264

Prognosis

McConville TH, Sullivan SB, Gomez-Simmonds A, Whittier S, Uhlemann AC
PLoS One 2017;12(10):e0186195. Epub 2017 Oct 12 doi: 10.1371/journal.pone.0186195. PMID: 29023567Free PMC Article
Senanayake EL, Giri R, Gopal S, Nevill A, Luckraz H
J Hosp Infect 2017 Jan;95(1):81-86. Epub 2016 Sep 16 doi: 10.1016/j.jhin.2016.09.007. PMID: 27837930
Tsai MH, Chiu CY, Shih HJ, Liao SL, Hua MC, Huang SH, Yao TC, Lai SH, Huang TS, Yeh KW, Chen LC, Su KW, Lim WH, Chang YJ, Chiang CH, Huang SY, Huang JL
Clin Microbiol Infect 2017 Feb;23(2):121.e1-121.e7. Epub 2016 Oct 26 doi: 10.1016/j.cmi.2016.10.020. PMID: 27793735
Hefazi M, Damlaj M, Alkhateeb HB, Partain DK, Patel R, Razonable RR, Gastineau DA, Al-Kali A, Hashmi SK, Hogan WJ, Litzow MR, Patnaik MM
Transpl Infect Dis 2016 Dec;18(6):913-920. Epub 2016 Nov 11 doi: 10.1111/tid.12612. PMID: 27642723
Ohara S, Tazawa Y, Tanai C, Tanaka Y, Noda H, Horiuchi H, Usui K
Respir Investig 2016 Mar;54(2):92-7. Epub 2015 Oct 20 doi: 10.1016/j.resinv.2015.08.007. PMID: 26879478

Clinical prediction guides

McConville TH, Sullivan SB, Gomez-Simmonds A, Whittier S, Uhlemann AC
PLoS One 2017;12(10):e0186195. Epub 2017 Oct 12 doi: 10.1371/journal.pone.0186195. PMID: 29023567Free PMC Article
Lee GM, Kleinman K, Pelton S, Lipsitch M, Huang SS, Lakoma M, Dutta-Linn M, Rett M, Hanage WP, Finkelstein JA
Pediatrics 2017 Nov;140(5) Epub 2017 Oct 4 doi: 10.1542/peds.2017-0001. PMID: 28978716
Biobaku Oluwafunmilola R, Olaleye Atinuke O, Adefusi Olorunwa F, Adeyemi Babalola A, Onipede Anthony O, Loto Olabisi M, Imaralu John O
J Neonatal Perinatal Med 2017;10(1):91-97. doi: 10.3233/NPM-1685. PMID: 28304326
Tsai MH, Chiu CY, Shih HJ, Liao SL, Hua MC, Huang SH, Yao TC, Lai SH, Huang TS, Yeh KW, Chen LC, Su KW, Lim WH, Chang YJ, Chiang CH, Huang SY, Huang JL
Clin Microbiol Infect 2017 Feb;23(2):121.e1-121.e7. Epub 2016 Oct 26 doi: 10.1016/j.cmi.2016.10.020. PMID: 27793735
Tan X, Zhu S, Yan D, Chen W, Chen R, Zou J, Yan J, Zhang X, Farmakiotis D, Mylonakis E
Med Mycol 2016 Aug 1;54(6):557-66. Epub 2016 Mar 21 doi: 10.1093/mmy/myw009. PMID: 27001670

Recent systematic reviews

Detsis M, Karanika S, Mylonakis E
Crit Care Med 2017 Apr;45(4):705-714. doi: 10.1097/CCM.0000000000002253. PMID: 28157141
Turrentine MA, Colicchia LC, Hirsch E, Cheng PJ, Tam T, Ramsey PS, Page-Ramsey SM
Am J Perinatol 2016 Apr;33(5):510-7. Epub 2015 Dec 18 doi: 10.1055/s-0035-1569988. PMID: 26683604
Karanika S, Zervou FN, Zacharioudakis IM, Paudel S, Mylonakis E
J Hosp Infect 2015 Nov;91(3):257-63. Epub 2015 Aug 28 doi: 10.1016/j.jhin.2015.07.014. PMID: 26428959
Hwang MS, Forman SN, Kanter JA, Friedman M
JAMA Otolaryngol Head Neck Surg 2015 Mar;141(3):245-9. doi: 10.1001/jamaoto.2014.3296. PMID: 25541915
Zervou FN, Zacharioudakis IM, Ziakas PD, Mylonakis E
Pediatrics 2014 Apr;133(4):e1015-23. Epub 2014 Mar 10 doi: 10.1542/peds.2013-3413. PMID: 24616358

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