Caenorhabditis elegans predicted gene hap-1, encoding yeast HydroxylAminoPurine sensitivity related.
SUMMARY back to top
Map on chromosome III, links to other databases and other names
Map: This gene hap-1 maps on chomosome III at position -1.90 (interpolated).
Links to: WormBase, RNAiDB.
Other names: The gene is also known in Wormgenes/AceView by its positional name 3G353, in Wormbase by its cosmid.number name ZC395.7.
Closest AceView homologs in other species ?
The closest human gene, according to BlastP, is the AceView gene ITPA.
The closest mouse gene, according to BlastP, is the AceView gene Itpa (e=10-59).
The closest A.thaliana gene, according to BlastP, is the AceView gene AT4G13720
          Complete gene on genome diagram: back to top
Please choose between the zoomable GIF version., and the HTML5/SVG version.
This diagram shows in true scale the gene on the genome, the mRNAs and the cDNA clones.
Compact gene diagram back to top
Gene hap-1 5' 3' encoded on plus strand of chromosome III from 5,263,901 to 5,264,961 0bp 0 Alternative mRNAs are shown aligned from 5' to 3' on a virtual genome where introns have been shrunk to a minimal length. Exon size is proportional to length, intron height reflects the number of cDNAs supporting each intron, the small numbers show the support of the introns in deep sequencing (with details in mouse-over) . Introns of the same color are identical, of different colors are different. 'Good proteins' are pink, partial or not-good proteins are yellow, uORFs are green. 5' cap or3' poly A flags show completeness of the transcript.
Sequences: click on the numbers to get the DNA back to top
Summaries of AceView transcripts and proteins back to top
Predicted protein properties back to top
Gene neighbors and Navigator on chromosome III back to top
gop-1 D C R P gop-2 D C I P gop-3 D C R P hap-1 C I P gro-1 D C I P 3G357 C 3G359 C toc-1 D C R P clk-1 D C I R P 3G374 D C P cnd-1 C I P 3G340 C 3G350 D C I R P ztf-8 D C P 3G364 5kb 0 wrs-2, 44 accessions, 5 variants gop-1, 31 accessions, 6 variants gop-2, 138 accessions 2 variants gop-3, 48 accessions, 3 variants hap-1, 0 accession gro-1, 33 accessions, 6 variants 3G357, 37 accessions, 3 variants 3G359, 7 accessions, 2 variants toc-1, 46 accessions, 5 variants clk-1, 112 accessions 3 variants 3G387, 44 accessions, 7 variants 3G330, 1 accession 3G356, 4 accessions, 2 variants 3G362, 5 accessions 3G374, 0 accession cnd-1, 14 accessions 3G340, 67 accessions, 5 variants 3G350, 6 accessions, 3 variants ztf-8, 50 accessions, 5 variants 3G364, 74 accessions, 2 variants ZOOM OUT                 D:disease, C:conserved, I:interactions, R:regulation, P:publications         Read more...
Bibliography back to top
Please see these 3 articles in PubMed.
In addition we found 1 papers for which we do not have a PubMed identifier
? Gene Summary Gene on genome mRNA Expression Tissue Function, regulation, related genes CI

To mine knowledge about the gene, please click the 'Gene Summary' or the 'Function, regulation, related genes ' tab at the top of the page. The 'Gene Summary' page includes all we learnt about the gene, functional annotations of neighboring genes, maps, links to other sites and the bibliography. The 'Function, regulation, related genes ' page includes Diseases (D), Pathways, GO annotations, conserved domains (C), interactions (I) reference into function, and pointers to all genes with the same functional annotation.
To see the mRNA diagram, sequence and annotation, click the 'mRNA' tab. To examine expression data from all cDNAs clustered in this gene by AceView, click the 'Expression tissue'.

If you know more about this gene, or found errors, please share your knowledge. Thank you !