Caenorhabditis elegans predicted gene dpf-7, encoding dipeptidyl Peptidase Four (IV) family.
SUMMARY back to top
Map on chromosome IV, links to other databases and other names
Map: This gene dpf-7 maps on chomosome IV at position +1.28 (interpolated).
Links to: WormBase, RNAiDB.
Other names: The gene is also known in Wormgenes/AceView by its positional name 4F564, in Wormbase by its cosmid.number name R11E3.7.
          Complete gene on genome diagram: back to top
Please choose between the zoomable GIF version., and the HTML5/SVG version.
This diagram shows in true scale the gene on the genome, the mRNAs and the cDNA clones.
Compact gene diagram back to top
Gene dpf-7 5' 3' encoded on minus strand of chromosome IV from 4,802,582 to 4,799,379 0bp 0 Alternative mRNAs are shown aligned from 5' to 3' on a virtual genome where introns have been shrunk to a minimal length. Exon size is proportional to length, intron height reflects the number of cDNAs supporting each intron, the small numbers show the support of the introns in deep sequencing (with details in mouse-over) . Introns of the same color are identical, of different colors are different. 'Good proteins' are pink, partial or not-good proteins are yellow, uORFs are green. 5' cap or3' poly A flags show completeness of the transcript.
Sequences: click on the numbers to get the DNA back to top
Summaries of AceView transcripts and proteins back to top
Predicted protein properties back to top
Gene neighbors and Navigator on chromosome IV back to top
4F557 C P 4F575 D C P srw-95 C srw-94 C C R P nhr-104 D C I P eor-1 C I P dpf-7 C I P dpf-5 C 4F570 C P ubxn-6 C R 4F580 5kb 0 4F557, 12 accessions 4F575, 291 accessions 4 variants srw-95, 1 accession srw-94, 0 accession 4F538, 13 accessions, 3 variants set-15, 3 accessions nhr-104, 89 accessions 11 variants eor-1, 113 accessions 7 variants dpf-7, 0 accession dpf-5, 50 accessions, 3 variants 4F570, 6 accessions, 2 variants ubxn-6, 59 accessions 2 variants 4F580, 33 accessions, 5 variants ZOOM OUT                 D:disease, C:conserved, I:interactions, R:regulation, P:publications         Read more...
Bibliography back to top
Please see this 1 article in PubMed.
? Gene Summary Gene on genome mRNA Expression Tissue Function, regulation, related genes CI

To mine knowledge about the gene, please click the 'Gene Summary' or the 'Function, regulation, related genes ' tab at the top of the page. The 'Gene Summary' page includes all we learnt about the gene, functional annotations of neighboring genes, maps, links to other sites and the bibliography. The 'Function, regulation, related genes ' page includes Diseases (D), Pathways, GO annotations, conserved domains (C), interactions (I) reference into function, and pointers to all genes with the same functional annotation.
To see the mRNA diagram, sequence and annotation, click the 'mRNA' tab. To examine expression data from all cDNAs clustered in this gene by AceView, click the 'Expression tissue'.

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