Caenorhabditis elegans predicted gene dnj-2, encoding DNaJ domain (prokaryotic heat shock protein).
SUMMARY back to top
[Wormbase] This gene encodes a protein containing a DnaJ ('J') domain.
Map on chromosome IV, links to other databases and other names
Map: This gene dnj-2 maps on chomosome IV at position +5.20 (interpolated).
Links to: WormBase, RNAiDB.
Other names: The gene is also known in Wormgenes/AceView by its positional name 4M78, in Wormbase by its cosmid.number name B0035.2.
Closest AceView homologs in other species ?
The closest human gene, according to BlastP, is the AceView gene bA16L21.2.1andGNG10.
The closest mouse gene, according to BlastP, is the AceView gene 2010203O07Rik (e=3 10-42).
The closest A.thaliana gene, according to BlastP, is the AceView gene AT1G61770
          Complete gene on genome diagram: back to top
Please choose between the zoomable GIF version., and the HTML5/SVG version.
This diagram shows in true scale the gene on the genome, the mRNAs and the cDNA clones.
Compact gene diagram back to top
Gene dnj-2 5' 3' encoded on minus strand of chromosome IV from 11,313,951 to 11,312,413 0bp 0 Alternative mRNAs are shown aligned from 5' to 3' on a virtual genome where introns have been shrunk to a minimal length. Exon size is proportional to length, intron height reflects the number of cDNAs supporting each intron, the small numbers show the support of the introns in deep sequencing (with details in mouse-over) . Introns of the same color are identical, of different colors are different. 'Good proteins' are pink, partial or not-good proteins are yellow, uORFs are green. 5' cap or3' poly A flags show completeness of the transcript.
Sequences: click on the numbers to get the DNA back to top
Summaries of AceView transcripts and proteins back to top
Predicted protein properties back to top
Gene neighbors and Navigator on chromosome IV back to top
4M59 D C R P dnj-1 C R 4M77 C I R P pfd-4 C R P gspd-1 D C R P C 4M87 C I P his-48 D C P his-45 D C P 4M92 C 4M60 C 4M62 C R 4M70 D I P mir-59 C R dnj-2 C 4M80 D C P his-47 D C P his-46 D C P 4M94 D C P 4M96 D C I P 4M98 5kb 0 4M59, 69 accessions, 4 variants dnj-1, 27 accessions, 3 variants 4M77, 126 accessions, 3 variants pfd-4, 35 accessions, 2 variants gspd-1, 62 accessions 4 variants 4M85, 5 accessions, 2 variants 4M87, 34 accessions his-48, 17 accessions his-45, 17 accessions 4M61, 2 accessions 4M93, 2 accessions 4M92, 0 accession 4M60, 27 accessions 4M62, 13 accessions 4M70, 307 accessions, 6 variants mir-59, 1 accession dnj-2, 0 accession 4M80, 112 accessions, 5 variants his-47, 10 accessions his-46, 10 accessions 4M94, 92 accessions 4M96, 53 accessions, 4 variants 4M98, 28 accessions, 2 variants ZOOM OUT                 D:disease, C:conserved, I:interactions, R:regulation, P:publications         Read more...
? Gene Summary Gene on genome mRNA Expression Tissue Function, regulation, related genes C

To mine knowledge about the gene, please click the 'Gene Summary' or the 'Function, regulation, related genes ' tab at the top of the page. The 'Gene Summary' page includes all we learnt about the gene, functional annotations of neighboring genes, maps, links to other sites and the bibliography. The 'Function, regulation, related genes ' page includes Diseases (D), Pathways, GO annotations, conserved domains (C), interactions (I) reference into function, and pointers to all genes with the same functional annotation.
To see the mRNA diagram, sequence and annotation, click the 'mRNA' tab. To examine expression data from all cDNAs clustered in this gene by AceView, click the 'Expression tissue'.

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