Homo sapiens gene PLEKHJ1, encoding pleckstrin homology domain containing, family J member 1.
TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
SUMMARY back to top
RefSeq annotates one representative transcript (NM included in AceView variant.e), but Homo sapiens cDNA sequences in GenBank, dbEST, Trace and SRA, filtered against clone rearrangements, coaligned on the genome and clustered in a minimal non-redundant way by the manually supervised AceView program, support at least 11 spliced variants.

AceView synopsis, each blue text links to tables and details
Expression: According to AceView, this gene is expressed at high level, 3.0 times the average gene in this release. The sequence of this gene is defined by 339 GenBank accessions from 304 cDNA clones, some from lung (seen 25 times), brain (24), testis (17), eye (12), hippocampus (12), colon (11), kidney (11) and 121 other tissues. We annotate structural defects or features in 10 cDNA clones.
Alternative mRNA variants and regulation: The gene contains 10 distinct gt-ag introns. Transcription produces 12 different mRNAs, 11 alternatively spliced variants and 1 unspliced form. There are 2 probable alternative promotors, 2 non overlapping alternative last exons and 3 validated alternative polyadenylation sites (see the diagram). The mRNAs appear to differ by presence or absence of a cassette exon, overlapping exons with different boundaries, splicing versus retention of 8 introns. 672 bp of this gene are antisense to spliced gene DOT1L, 492 to SF3A2, raising the possibility of regulated alternate expression.
3 variants were isolated in vivo, despite the fact that they are predicted targets of nonsense mediated mRNA decay (NMD).
Efficacy of translation may be reduced by the presence of a shorter translated product (uORF) initiating at an AUG upstream of the main open reading frame (in variant eAug10).
Function: There are 2 articles specifically referring to this gene in PubMed. Proteins are expected to have molecular function (protein binding) and to localize in various compartments (cytoplasm, nucleus). Putative protein interactors have been described (ACVR1, KRT33B, PINX1ANDSOX7, TGFBR1).
Protein coding potential: The 11 spliced and the unspliced mRNAs putatively encode good proteins, altogether 11 different isoforms (6 complete, 4 COOH complete, 1 partial), some containing PH domain [Pfam].

Please quote: AceView: a comprehensive cDNA-supported gene and transcripts annotation, Genome Biology 2006, 7(Suppl 1):S12.
Map on chromosome 19, links to other databases and other names
Map: This gene PLEKHJ1 maps on chromosome 19, at 19p13.3 according to Entrez Gene. In AceView, it covers 7.96 kb, from 2237974 to 2230018 (NCBI 37, August 2010), on the reverse strand.
Links to: the SNP view, gene overviews from Entrez Gene 55111, GeneCards, expression data from ECgene, UniGene, molecular and other annotations from UCSC, or our GOLD analysis.
The previous AceView annotation is here.
Other names: The gene is also known as PLEKHJ1, GNRPX or FLJ10297, LOC55111. It has been described as pleckstrin homology domain-containing family J member 1, 9530063M10Rik, PH domain-containing family J member 1, guanine nucleotide releasing protein x, guanine nucleotide-releasing protein x.
Closest AceView homologs in other species ?
The closest mouse gene, according to BlastP, is the AceView gene Plekhj1 (e=7 10-59).
The closest C.elegans genes, according to BlastP, are the AceView/WormGenes uig-1 (e=0.15), cnt-1 (e=0.16), which may contain interesting functional annotation
RNA_seq discoveries back to top
Expression/conservation in primates tissues evaluated by cross-mapping to human. back to top
PLEKHJ1 Gene expression in 15 primates, 16 tissues, from the NHPRTR project in sFPKM BAB SkeletalMuscle WholeBlood CHP Kidney Liver Lung Spleen CMC CMM Cerebellum HUM Brain Colon Heart LymphNode Ovary Testis JMI BoneMarrow MLM OWL PTM RMC RMI Pituitary SQM Thymus MST SMY RTL 3.57 13.3 10.8 4.39 3.82 5.40 5.04 7.13 10.8 1.91 11.6 5.04 10.8 9.41 17.6 5.79 6.65 17.6 7.64 8.78 18.8 7.13 8.19 7.64 0.72 0.89 1.91 2.70 18.8 20.2 13.3 2.19 1.26 17.6 5.79 5.40 4.71 18.8 4.10 4.71 6.65 7.64 5.79 4.10 7.64 7.64 7.64 2.52 5.79 10.1 2.70 9.41 15.3 9.41 5.40 7.13 5.04 4.71 5.04 7.64 8.78 4.39 4.39 6.65 3.33 2.90 1.91 2.90 7.13 7.13 3.33 6.21 7.13 5.79 8.19 10.1 3.10 3.10 6.65 2.05 6.65 6.21 2.70 6.21 8.19 5.79 2.70 3.82 3.33 7.13 7.64 8.19 4.10 3.57 8.19 3.57 6.65 6.21 4.39 4.71 9.41 6.65 3.57 4.10 4.71 6.65 7.64 3.33 4.71 3.57 6.65 6.65 3.33 2.70 2.52 9.41 4.71 7.64 2.90 4.39 6.21 4.39 6.21 8.19 3.57 1.91 4.71 6.65 6.21 3.10 2.70 4.71 3.82 3.82 5.79 0.17 0.45 1.26 2.19 5.40 3.82 2.35 2.19 2.05 3.33 5.04 1.91 2.70 2.05 2.19 3.10 4.71 7.13 4.39 6.21 Expression quantiles None Weak 1 2 3 4 5 6 7 8 10 20 This gene All genes log2 distributions RNA-seq gene expression profile across 16 selected tissues from the Non-Human Primates Reference Transcriptome Resource (link to NHPRTR project).
- Primates: Apes (HUM: Human (Illumina BodyMap 2), CHP: Chimpanzee), Old World monkeys (PTM: Pig-Tailed Macaque, JMI Japanese Macaque, RMI Rhesus Macaque Indian, RMC Rhesus Macaque Chinese, CMM Cynomolgus Macaque Mauritian, CMC Cynomolgus Macaque Chinese, BAB Olive Baboon, SMY Sooty Mangabey); New World monkeys (MST common Marmoset, SQM Squirrel Monkey, OWL Owl Monkey); and Lemurs (MLM Mouse Lemur, RTL Ring-Tailed Lemur).
- The level for significantly expressed genes is color coded in 8 equal sized bins (light to dark green). Light gray is for weak not-accurately measured expression (2 to 8 reads above intergenic background); dark gray for no expression or no sequence conservation (0 read in gene). The plot to the right shows the distribution of measured expression values in all tissues for all genes (blue) and for this gene (green), in Magic index = log2(1000 sFPKM).
You may also examine the strand-specific genome coverage plots on the experimental AceView/Magic hub at UCSC, by tissue or by species. Tracks may be slow to load; please reload if some tracks come up yellow-greenish, and thanks to UCSC for the great work!.
Read more...
          Complete gene on genome diagram: back to top
Please choose between the zoomable GIF version., and the HTML5/SVG version.
This diagram shows in true scale the gene on the genome, the mRNAs and the cDNA clones.
Compact gene diagram back to top
Gene PLEKHJ1 5' 3' encoded on minus strand of chromosome 19 from 2,237,974 to 2,230,018 113816 2348 a 4500 b 166 113816 c 113816 d 76 113816 e [NM] h-u 4500 f 113816 g i 113816 j 113816 k l 1kb 0 117 bp exon 117 bp exon 164 bp [gt-ag] intron 139 GenBank accessions 74212 RNA-seq supporting reads 13410 UHR pooled cells 6337 Brain 3498 Blood 50525 Neuroblastoma 442 Other (also 5025 Primates bodymap) 68 bp exon 94 bp [gt-ag] intron 158 GenBank accessions 75009 RNA-seq supporting reads 13790 UHR pooled cells 6560 Brain 4458 Blood 49637 Neuroblastoma 564 Other (also 5820 Primates bodymap) 67 bp exon 1521 bp [gt-ag] intron 154 GenBank accessions 113662 RNA-seq supporting reads 22364 UHR pooled cells 10064 Brain 6300 Blood 74297 Neuroblastoma 637 Other (also 7263 Primates bodymap) 91 bp exon 88 bp [gt-ag] intron 161 GenBank accessions 110944 RNA-seq supporting reads 23079 UHR pooled cells 10188 Brain 6487 Blood 70583 Neuroblastoma 607 Other (also 8842 Primates bodymap) 64 bp exon 3385 bp [gt-ag] intron 3 GenBank accessions 2345 RNA-seq supporting reads 572 UHR pooled cells 126 Brain 82 Blood 1561 Neuroblastoma 4 Other (also 61 Primates bodymap) 594 bp exon 7 accessions, some from brain (seen once) cerebellum (once), choriocarcinoma (once) embryonic stem cell, retinoic acid andmitogen-treated hes cell line H7 (once) kidney (once) 594 bp exon 144 bp exon 144 bp exon 164 bp [gt-ag] intron 139 GenBank accessions 74212 RNA-seq supporting reads 13410 UHR pooled cells 6337 Brain 3498 Blood 50525 Neuroblastoma 442 Other (also 5025 Primates bodymap) 229 bp exon 1700 bp [gt-ag] intron 2 GenBank accessions 4498 RNA-seq supporting reads 754 UHR pooled cells 450 Brain 154 Blood 3117 Neuroblastoma 23 Other (also 409 Primates bodymap) 64 bp exon 92 bp [gt-ag] intron 151 GenBank accessions 121576 RNA-seq supporting reads 26908 UHR pooled cells 12564 Brain 5180 Blood 76324 Neuroblastoma 600 Other (also 6920 Primates bodymap) 337 bp exon 1 accession from hepatocellular carcinoma cell line from liver 337 bp exon 289 bp exon 387 bp [gt-ag] intron 2 GenBank accessions 164 RNA-seq supporting reads 27 UHR pooled cells 24 Brain 2 Blood 109 Neuroblastoma 2 Other 68 bp exon 94 bp [gt-ag] intron 158 GenBank accessions 75009 RNA-seq supporting reads 13790 UHR pooled cells 6560 Brain 4458 Blood 49637 Neuroblastoma 564 Other (also 5820 Primates bodymap) 67 bp exon 1521 bp [gt-ag] intron 154 GenBank accessions 113662 RNA-seq supporting reads 22364 UHR pooled cells 10064 Brain 6300 Blood 74297 Neuroblastoma 637 Other (also 7263 Primates bodymap) 91 bp exon 88 bp [gt-ag] intron 161 GenBank accessions 110944 RNA-seq supporting reads 23079 UHR pooled cells 10188 Brain 6487 Blood 70583 Neuroblastoma 607 Other (also 8842 Primates bodymap) 64 bp exon 92 bp [gt-ag] intron 151 GenBank accessions 121576 RNA-seq supporting reads 26908 UHR pooled cells 12564 Brain 5180 Blood 76324 Neuroblastoma 600 Other (also 6920 Primates bodymap) 750 bp exon 2 accessions, some from testis (seen 2 times) Validated 3' end, 1 accession 750 bp exon 171 bp exon 171 bp exon 164 bp [gt-ag] intron 139 GenBank accessions 74212 RNA-seq supporting reads 13410 UHR pooled cells 6337 Brain 3498 Blood 50525 Neuroblastoma 442 Other (also 5025 Primates bodymap) 68 bp exon 94 bp [gt-ag] intron 158 GenBank accessions 75009 RNA-seq supporting reads 13790 UHR pooled cells 6560 Brain 4458 Blood 49637 Neuroblastoma 564 Other (also 5820 Primates bodymap) 67 bp exon 1521 bp [gt-ag] intron 154 GenBank accessions 113662 RNA-seq supporting reads 22364 UHR pooled cells 10064 Brain 6300 Blood 74297 Neuroblastoma 637 Other (also 7263 Primates bodymap) 91 bp exon 88 bp [gt-ag] intron 161 GenBank accessions 110944 RNA-seq supporting reads 23079 UHR pooled cells 10188 Brain 6487 Blood 70583 Neuroblastoma 607 Other (also 8842 Primates bodymap) 536 bp exon 6 accessions, some from cerebellum (seen once) cervix (once), embryonic stem cells cell lines H1, H7, andh9 (once) eye (once), rectum (once) capped 5' end, 1 accession 536 bp exon 681 bp exon 681 bp exon 39 bp uORF 681 bp exon 342 bp [gt-ag] intron 2 GenBank accessions 74 RNA-seq supporting reads 55 UHR pooled cells 1 Brain 18 Neuroblastoma 798 bp exon 798 bp exon 798 bp exon 164 bp [gt-ag] intron 139 GenBank accessions 74212 RNA-seq supporting reads 13410 UHR pooled cells 6337 Brain 3498 Blood 50525 Neuroblastoma 442 Other (also 5025 Primates bodymap) 68 bp exon 68 bp exon 94 bp [gt-ag] intron 158 GenBank accessions 75009 RNA-seq supporting reads 13790 UHR pooled cells 6560 Brain 4458 Blood 49637 Neuroblastoma 564 Other (also 5820 Primates bodymap) 67 bp exon 67 bp exon 1521 bp [gt-ag] intron 154 GenBank accessions 113662 RNA-seq supporting reads 22364 UHR pooled cells 10064 Brain 6300 Blood 74297 Neuroblastoma 637 Other (also 7263 Primates bodymap) 91 bp exon 91 bp exon 88 bp [gt-ag] intron 161 GenBank accessions 110944 RNA-seq supporting reads 23079 UHR pooled cells 10188 Brain 6487 Blood 70583 Neuroblastoma 607 Other (also 8842 Primates bodymap) 64 bp exon 64 bp exon 92 bp [gt-ag] intron 151 GenBank accessions 121576 RNA-seq supporting reads 26908 UHR pooled cells 12564 Brain 5180 Blood 76324 Neuroblastoma 600 Other (also 6920 Primates bodymap) 758 bp exon 758 bp exon 246 accessions, NM_018049.1 some from lung (seen 24 times) brain (17), testis (12) hippocampus (11), eye (9) Validated 3' end, 45 accessions 758 bp exon 541 bp exon 541 bp exon 1 accession from embryonic stem cells embryoid bodiesderived from H1 H7 and H9 cells 541 bp exon 140 bp exon 164 bp [gt-ag] intron 139 GenBank accessions 74212 RNA-seq supporting reads 13410 UHR pooled cells 6337 Brain 3498 Blood 50525 Neuroblastoma 442 Other (also 5025 Primates bodymap) 68 bp exon 94 bp [gt-ag] intron 158 GenBank accessions 75009 RNA-seq supporting reads 13790 UHR pooled cells 6560 Brain 4458 Blood 49637 Neuroblastoma 564 Other (also 5820 Primates bodymap) 67 bp exon 1700 bp [gt-ag] intron 2 GenBank accessions 4498 RNA-seq supporting reads 754 UHR pooled cells 450 Brain 154 Blood 3117 Neuroblastoma 23 Other (also 409 Primates bodymap) 64 bp exon 92 bp [gt-ag] intron 151 GenBank accessions 121576 RNA-seq supporting reads 26908 UHR pooled cells 12564 Brain 5180 Blood 76324 Neuroblastoma 600 Other (also 6920 Primates bodymap) 360 bp exon 1 accession from eye from normal pigmented retinal epithelium 360 bp exon 459 bp exon 459 bp exon 221 bp [gt-ag] intron 16 GenBank accessions 6862 RNA-seq supporting reads 1887 UHR pooled cells 561 Brain 73 Blood 4308 Neuroblastoma 33 Other (also 172 Primates bodymap) 11 bp exon 94 bp [gt-ag] intron 158 GenBank accessions 75009 RNA-seq supporting reads 13790 UHR pooled cells 6560 Brain 4458 Blood 49637 Neuroblastoma 564 Other (also 5820 Primates bodymap) 67 bp exon 1521 bp [gt-ag] intron 154 GenBank accessions 113662 RNA-seq supporting reads 22364 UHR pooled cells 10064 Brain 6300 Blood 74297 Neuroblastoma 637 Other (also 7263 Primates bodymap) 91 bp exon 88 bp [gt-ag] intron 161 GenBank accessions 110944 RNA-seq supporting reads 23079 UHR pooled cells 10188 Brain 6487 Blood 70583 Neuroblastoma 607 Other (also 8842 Primates bodymap) 64 bp exon 92 bp [gt-ag] intron 151 GenBank accessions 121576 RNA-seq supporting reads 26908 UHR pooled cells 12564 Brain 5180 Blood 76324 Neuroblastoma 600 Other (also 6920 Primates bodymap) 487 bp exon 16 accessions, some from liver (seen 3 times) testis (2), blood (once) cervix (once), embryonic stem cells cell lines H1, H7, andh9 (once) 487 bp exon 109 bp exon 109 bp exon 164 bp [gt-ag] intron 139 GenBank accessions 74212 RNA-seq supporting reads 13410 UHR pooled cells 6337 Brain 3498 Blood 50525 Neuroblastoma 442 Other (also 5025 Primates bodymap) 1841 bp exon 1841 bp exon 88 bp [gt-ag] intron 161 GenBank accessions 110944 RNA-seq supporting reads 23079 UHR pooled cells 10188 Brain 6487 Blood 70583 Neuroblastoma 607 Other (also 8842 Primates bodymap) 11 accessions, some from small intestine (seen 2 times) b-cells (once), brain (once) colon (once), embryonic stem cells embryoid bodiesderived from H1 H7 and H9 cells (once) capped 5' end, 1 accession Validated 3' end, 2 accessions 908 bp exon 740 bp exon 740 bp exon 94 bp [gt-ag] intron 158 GenBank accessions 75009 RNA-seq supporting reads 13790 UHR pooled cells 6560 Brain 4458 Blood 49637 Neuroblastoma 564 Other (also 5820 Primates bodymap) 67 bp exon 1521 bp [gt-ag] intron 154 GenBank accessions 113662 RNA-seq supporting reads 22364 UHR pooled cells 10064 Brain 6300 Blood 74297 Neuroblastoma 637 Other (also 7263 Primates bodymap) 91 bp exon 91 bp exon 88 bp [gt-ag] intron 161 GenBank accessions 110944 RNA-seq supporting reads 23079 UHR pooled cells 10188 Brain 6487 Blood 70583 Neuroblastoma 607 Other (also 8842 Primates bodymap) 64 bp exon 92 bp [gt-ag] intron 151 GenBank accessions 121576 RNA-seq supporting reads 26908 UHR pooled cells 12564 Brain 5180 Blood 76324 Neuroblastoma 600 Other (also 6920 Primates bodymap) 10 accessions, some from brain (seen 3 times) medulla (3), kidney (2) adenocarcinoma cell line (once) colon (once) 556 bp exon 317 bp exon 317 bp exon 94 bp [gt-ag] intron 158 GenBank accessions 75009 RNA-seq supporting reads 13790 UHR pooled cells 6560 Brain 4458 Blood 49637 Neuroblastoma 564 Other (also 5820 Primates bodymap) 67 bp exon 1521 bp [gt-ag] intron 154 GenBank accessions 113662 RNA-seq supporting reads 22364 UHR pooled cells 10064 Brain 6300 Blood 74297 Neuroblastoma 637 Other (also 7263 Primates bodymap) 91 bp exon 91 bp exon 88 bp [gt-ag] intron 161 GenBank accessions 110944 RNA-seq supporting reads 23079 UHR pooled cells 10188 Brain 6487 Blood 70583 Neuroblastoma 607 Other (also 8842 Primates bodymap) 2 accessions, some from myeloma (seen 2 times) 98 bp exon 177 bp exon 177 bp exon 164 bp [gt-ag] intron 139 GenBank accessions 74212 RNA-seq supporting reads 13410 UHR pooled cells 6337 Brain 3498 Blood 50525 Neuroblastoma 442 Other (also 5025 Primates bodymap) 68 bp exon 94 bp [gt-ag] intron 158 GenBank accessions 75009 RNA-seq supporting reads 13790 UHR pooled cells 6560 Brain 4458 Blood 49637 Neuroblastoma 564 Other (also 5820 Primates bodymap) 1893 bp exon 8 accessions, some from uterus tumor (seen 2 times) adenocarcinoma cell line (once) brain (once), breast tumor tissue (once), colon normal (once) 1893 bp exon Alternative mRNAs are shown aligned from 5' to 3' on a virtual genome where introns have been shrunk to a minimal length. Exon size is proportional to length, intron height reflects the number of cDNAs supporting each intron, the small numbers show the support of the introns in deep sequencing (with details in mouse-over) . Introns of the same color are identical, of different colors are different. 'Good proteins' are pink, partial or not-good proteins are yellow, uORFs are green. 5' cap or3' poly A flags show completeness of the transcript.
Read more...
Sequences: click on the numbers to get the DNA back to top
mRNA variant mRNA matching the genome Best predicted protein 5' UTR 3' UTR uORF Upstream sequence Transcription
unit
pre-mRNA
Downstream sequence
aAug10 1001 bp 277 aa 23 bp 144 bp 2kb probably including promoter 6253 bp 1kb
bAug10 774 bp 221 aa 107 bp 2kb probably including promoter 2730 bp 1kb
cAug10 1329 bp 214 aa 684 bp 2kb 3511 bp 1kb
dAug10 933 bp 199 aa 77 bp 331 bp 2kb including Promoter 2800 bp 1kb
eAug10 2527 bp 149 aa 1385 bp 692 bp 36 bp 2kb possibly including promoter 4828 bp 1kb
fAug10 699 bp 134 aa 294 bp 2kb probably including promoter 2749 bp 1kb
gAug10 1179 bp 130 aa 365 bp 421 bp 2kb possibly including promoter 3195 bp 1kb
hAug10-unspliced 541 bp 126 aa 161 bp 2kb possibly including promoter 541 bp 1kb
iAug10 2858 bp 108 aa 15 bp 2516 bp 2kb including Promoter 3110 bp 1kb
jAug10 1518 bp 105 aa 499 bp 701 bp 2kb possibly including promoter 3313 bp 1kb
kAug10 573 bp 105 aa 76 bp 179 bp 2kb probably including promoter 2276 bp 1kb
lAug10 2138 bp 104 aa 2kb including Promoter 2396 bp 1kb

Gene neighbors and Navigator on chromosome 19p13.3 back to top
R C P G R SCAMP4andADAT3 D C R P CSNK1G2 C I R P R IZUMO4 R P DOT1L D C I R P SF3A2 C I R P AMH D C I R P OAZ1andSPPL2B D C I R P G TMPRSS9 C R P GADD45B D C I R P C C D C R P ATP8B3 C I R P REXO1 D C I R P KLF16 C R P FAM108A1 P C19orf34 D C I R P BTBD2 C I R P MKNK2 D C I R P AP3D1andMOBKL2A R C I R P PLEKHJ1 R R P JSRP1 C C19orf35 R C P LINGO3 C I R P LSM7 C D C I R P LMNB2andTIMM13 D I R P GNG7 100kb 0 foysoy, 5 accessions, 2 variants ONECUT3, 4 accessions LOC100288123, 38 accessions 4 variants SCAMP4andADAT3, 375 accessions 16 variants CSNK1G2, 427 accessions 12 variants fawter, 28 accessions 2 variants IZUMO4, 140 accessions 17 variants DOT1L, 215 accessions 12 variants SF3A2, 380 accessions 8 variants AMH, 47 accessions, 4 variants OAZ1andSPPL2B, 586 accessions 26 variants LOC100129831, 2 accessions TMPRSS9, 22 accessions 8 variants GADD45B, 460 accessions 8 variants koysoy, 1 accession fleyzaw, 1 accession geefla, 1 accession klarzar, 1 accession kafla, 6 accessions vornoy, 29 accessions spober, 2 accessions lawfla, 1 accession timare, 1 accession plazar, 1 accession chertybu, 1 accession sekera, 2 accessions nafla, 1 accession plerzar, 1 accession kluku, 1 accession terori, 2 accessions pufla, 1 accession rafla, 1 accession sperber, 4 accessions 2 variants choytybu, 1 accession cheynoy, 2 accessions rorfla, 1 accession smuzar, 1 accession shatybu, 4 accessions seyfla, 1 accession stoysarbo, 1 accession tawfla, 2 accessions smeezar, 2 accessions klarku, 1 accession surori, 1 accession shartybu, 1 accession zofla, 1 accession spuzar, 1 accession zoyfla, 1 accession shofla, 1 accession sherfla, 1 accession swasarbo, 1 accession fleyfla, 1 accession kleeku, 1 accession glufla, 2 accessions gleefla, 1 accession blytybu, 1 accession bloynoy, 1 accession dazaw, 1 accession blartybu, 1 accession skyfla, 2 accessions speyber, 1 accession skawfla, 2 accessions skorfla, 1 accession swysarbo, 3 accessions smafla, 1 accession smyfla, 1 accession berwy, 2 accessions smeefla, 1 accession jawzaw, 1 accession pluku, 1 accession smoyfla, 1 accession sporfla, 1 accession blertybu, 1 accession kawzaw, 1 accession skerku, 1 accession lerzaw, 1 accession ruzaw, 1 accession kosoy, 15 accessions blortybu, 1 accession boyfly, 1 accession skeenoy, 1 accession forfly, 1 accession swarsarbo, 1 accession veyzaw, 1 accession geyfly, 1 accession jufly, 1 accession jeefly, 1 accession kafly, 1 accession kerfly, 1 accession voyzaw, 2 accessions zyzaw, 1 accession shazaw, 1 accession lerfly, 1 accession lorfly, 1 accession swawsarbo, 1 accession smoyku, 1 accession noyfly, 1 accession glutybu, 1 accession perfly, 3 accessions rawfly, 1 accession lusoy, 1 accession fawy, 1 accession verfly, 2 accessions forsoy, 1 accession cheetybu, 1 accession kofla, 1 accession kawfla, 1 accession lafla, 3 accessions kleezar, 1 accession lofla, 1 accession loyfla, 1 accession myfla, 2 accessions spaley, 55 accessions slazar, 1 accession pyfla, 1 accession slerzar, 1 accession gorsoy, 7 accessions smyzar, 1 accession reefla, 1 accession sofla, 1 accession shytybu, 2 accessions wufla, 1 accession smeyzar, 1 accession barwy, 1 accession snyzar, 1 accession weefla, 2 accessions zyfla, 1 accession sorori, 1 accession snoyzar, 1 accession karori, 1 accession henoru, 1 accession blerfla, 2 accessions 2 variants hire, 2 accessions sparzar, 2 accessions starzar, 1 accession sheytybu, 1 accession ferzoy, 1 accession klawku, 1 accession bozaw, 1 accession blatybu, 1 accession barzaw, 1 accession glawfla, 1 accession glerfla, 2 accessions beewy, 1 accession shawnoy, 1 accession kloyku, 1 accession klyfla, 1 accession klerfla, 2 accessions pleefla, 1 accession skarfla, 1 accession skeyfla, 1 accession slawfla, 3 accessions dawzaw, 1 accession smeyfla, 1 accession snufla, 2 accessions plarku, 3 accessions snawfla, 1 accession blawtybu, 2 accessions pleeku, 8 accessions borwy, 2 accessions bleetybu, 1 accession bleytybu, 1 accession leezaw, 1 accession dowy, 3 accessions sworfla, 2 accessions bofly, 1 accession borfly, 1 accession dawfly, 1 accession feyfly, 1 accession flatybu, 1 accession slerku, 1 accession sloyku, 2 accessions smaku, 1 accession staber, 2 accessions styber, 2 accessions flartybu, 2 accessions jofly, 3 accessions, 2 variants smeeku, 2 accessions fleetybu, 1 accession kyfly, 3 accessions keefly, 1 accession stawber, 3 accessions leyfly, 1 accession werseebu, 3 accessions kurori, 1 accession shozaw, 1 accession blazaw, 1 accession snyku, 1 accession nofly, 1 accession somema, 2 accessions flozaw, 3 accessions deywy, 2 accessions sneyku, 1 accession glozaw, 1 accession pafly, 1 accession parfly, 2 accessions glytybu, 1 accession pawfly, 1 accession rofly, 4 accessions glartybu, 1 accession rerfly, 1 accession losoy, 12 accessions tarfly, 1 accession doywy, 2 accessions starnoy, 4 accessions tawfly, 1 accession gleyzaw, 1 accession steynoy, 1 accession swersarbo, 1 accession glertybu, 1 accession wofly, 2 accessions werfly, 1 accession spaku, 1 accession worfly, 2 accessions steeber, 1 accession ATP8B3, 80 accessions 9 variants REXO1, 186 accessions 9 variants KLF16, 128 accessions 3 variants FAM108A1, 531 accessions 7 variants C19orf34, 16 accessions BTBD2, 436 accessions 9 variants MKNK2, 305 accessions 16 variants AP3D1andMOBKL2A, 814 accessions 22 variants honoru, 3 accessions PLEKHJ1, 321 accessions 12 variants stafla, 3 accessions JSRP1, 43 accessions, 3 variants C19orf35, 9 accessions duwy, 3 accessions LINGO3, 1 accession LSM7, 209 accessions, 10 variants jyfly, 2 accessions LMNB2andTIMM13, 425 accessions 7 variants GNG7, 257 accessions, 7 variants ZOOM IN                D:disease,C:conserved,I:interactions,R:regulation,P:publications         Read more...
Annotated mRNA diagrams back to top
Bibliography:               2 articles in PubMed back to top
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i, .j, .k, .l Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI

To mine knowledge about the gene, please click the 'Gene Summary' or the 'Function, regulation, related genes ' tab at the top of the page. The 'Gene Summary' page includes all we learnt about the gene, functional annotations of neighboring genes, maps, links to other sites and the bibliography. The 'Function, regulation, related genes ' page includes Diseases (D), Pathways, GO annotations, conserved domains (C), interactions (I) reference into function, and pointers to all genes with the same functional annotation.
To compare alternative variants, their summarized annotations, predicted proteins, introns and exons, or to access any sequence, click the 'Alternative mRNAs features' tab. To see a specific mRNA variant diagram, sequence and annotation, click the variant name in the 'mRNA' tab. To examine expression data from all cDNAs clustered in this gene by AceView, click the 'Expression tissue'.

If you know more about this gene, or found errors, please share your knowledge. Thank you !