Homo sapiens gene CCDC79, encoding coiled-coil domain containing 79.
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SUMMARY back to top
RefSeq annotates one representative transcript (NM included in AceView variant.a), but Homo sapiens cDNA sequences in GenBank, dbEST, Trace and SRA, filtered against clone rearrangements, coaligned on the genome and clustered in a minimal non-redundant way by the manually supervised AceView program, support at least 6 spliced variants.

AceView synopsis, each blue text links to tables and details
Expression: According to AceView, this gene is moderately expressed, only 20.3% of the average gene in this release. The sequence of this gene is defined by 24 GenBank accessions from 23 cDNA clones, some from testis (seen 11 times), pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones (once). We annotate structural defects or features in 3 cDNA clones.
Alternative mRNA variants and regulation: The gene contains 25 distinct gt-ag introns. Transcription produces 6 alternatively spliced mRNAs. There are 3 probable alternative promotors, 3 non overlapping alternative last exons and 2 validated alternative polyadenylation sites (see the diagram). The mRNAs appear to differ by truncation of the 5' end, truncation of the 3' end, presence or absence of 4 cassette exons, overlapping exons with different boundaries.
Note that mRNA .cAug10 was found in vivo, although it is a predicted target of nonsense mediated mRNA decay (NMD).
Efficacy of translation may be reduced by the presence of a shorter translated product (uORF) initiating at an AUG upstream of the main open reading frame (in variant aAug10, bAug10, cAug10, eAug10).
Function:. Functionally, the gene has been proposed to participate in a process (regulation of transcription). Proteins are expected to have molecular functions (binding, DNA binding).
Protein coding potential: 5 spliced mRNAs putatively encode good proteins, altogether 5 different isoforms (3 complete, 2 partial), some containing Myb-like DNA-binding domain [Pfam], a coiled coil stretch [Psort2]. The remaining mRNA variant (spliced) appears not to encode a good protein. Finally proteins from this gene may be modulated by acetylation; phosphorylation, as detailed at PhosphoSite.

Please quote: AceView: a comprehensive cDNA-supported gene and transcripts annotation, Genome Biology 2006, 7(Suppl 1):S12.
Map on chromosome 16, links to other databases and other names
Map: This gene CCDC79 maps on chromosome 16, at 16q22.1 according to Entrez Gene. In AceView, it covers 46.65 kb, from 66835525 to 66788879 (NCBI 37, August 2010), on the reverse strand.
Links to: manual annotations from PhosphoSite, the SNP view, gene overviews from Entrez Gene 283847, GeneCards, expression data from ECgene, UniGene, molecular and other annotations from UCSC, or our GOLD analysis.
The previous AceView annotation is here.
Other names: The gene is also known as CCDC79 or FLJ35894, LOC283847. It has been described as coiled-coil domain-containing protein 79.
Closest AceView homologs in other species ?
The closest mouse gene, according to BlastP, is the AceView gene Ccdc79 (e=0.0).
The closest C.elegans gene, according to BlastP, is the AceView/WormGene bar-1 (e=0.27), which may contain interesting functional annotation.
The closest A.thaliana gene, according to BlastP, is the AceView gene ATG2 (e=0.17), which may contain interesting functional annotation
RNA_seq discoveries back to top
Expression/conservation in primates tissues evaluated by cross-mapping to human. back to top
CCDC79 Gene expression in 15 primates, 16 tissues, from the NHPRTR project in sFPKM BAB SkeletalMuscle WholeBlood CHP Kidney Liver Lung Spleen CMC CMM Cerebellum HUM Brain Colon Heart LymphNode Ovary Testis JMI BoneMarrow MLM OWL PTM RMC RMI Pituitary SQM Thymus MST SMY RTL 0.22 0.51 0.27 3.82 2.90 5.04 0.05 0.04 0.06 5.79 8.19 9.41 0.39 11.6 3.10 3.82 7.13 2.52 20.2 4.71 2.52 1.26 1.45 1.91 0.26 0.32 1.26 0.51 1.45 0.96 2.70 1.66 0.34 0.48 0.48 0.24 0.32 0.34 0.15 0.29 0.24 0.34 0.22 0.11 0.07 0.51 0.13 0.13 0.14 2.05 15.3 2.05 4.10 5.04 3.57 0.83 6.65 6.65 8.78 5.79 5.79 3.57 6.21 6.65 0.96 12.4 7.13 16.4 10.1 5.79 4.10 3.57 2.19 18.8 7.13 2.90 7.13 2.70 5.79 11.6 1.10 7.64 12.4 0.13 0.15 0.29 0.10 0.19 0.32 0.27 0.27 0.36 0.15 0.16 2.52 2.70 10.1 4.71 0.68 0.51 5.40 6.65 1.78 0.24 8.78 1.91 0.36 0.26 0.72 0.22 0.39 0.34 0.32 3.82 3.33 1.18 1.02 0.72 0.22 0.51 0.11 0.34 0.19 2.19 3.82 7.13 2.90 7.13 1.26 7.64 11.6 18.8 35.1 1.55 0.55 0.68 0.96 1.26 Expression quantiles None Weak 1 2 3 4 5 6 7 8 10 20 This gene All genes log2 distributions RNA-seq gene expression profile across 16 selected tissues from the Non-Human Primates Reference Transcriptome Resource (link to NHPRTR project).
- Primates: Apes (HUM: Human (Illumina BodyMap 2), CHP: Chimpanzee), Old World monkeys (PTM: Pig-Tailed Macaque, JMI Japanese Macaque, RMI Rhesus Macaque Indian, RMC Rhesus Macaque Chinese, CMM Cynomolgus Macaque Mauritian, CMC Cynomolgus Macaque Chinese, BAB Olive Baboon, SMY Sooty Mangabey); New World monkeys (MST common Marmoset, SQM Squirrel Monkey, OWL Owl Monkey); and Lemurs (MLM Mouse Lemur, RTL Ring-Tailed Lemur).
- The level for significantly expressed genes is color coded in 8 equal sized bins (light to dark green). Light gray is for weak not-accurately measured expression (2 to 8 reads above intergenic background); dark gray for no expression or no sequence conservation (0 read in gene). The plot to the right shows the distribution of measured expression values in all tissues for all genes (blue) and for this gene (green), in Magic index = log2(1000 sFPKM).
You may also examine the strand-specific genome coverage plots on the experimental AceView/Magic hub at UCSC, by tissue or by species. Tracks may be slow to load; please reload if some tracks come up yellow-greenish, and thanks to UCSC for the great work!.
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          Complete gene on genome diagram: back to top
Please choose between the zoomable GIF version., and the HTML5/SVG version.
This diagram shows in true scale the gene on the genome, the mRNAs and the cDNA clones.
Compact gene diagram back to top
Gene CCDC79 5' 3' encoded on minus strand of chromosome 16 from 66,835,525 to 66,788,879 6 6 17 39 19 17 39 94 105 100 84 64 84 16 17 9 23 10 a [NM] 8 2 17 39 19 17 39 94 105 100 84 64 84 50 b 6 6 17 39 19 17 39 94 105 100 3 84 50 9 23 c 1 17 39 19 17 39 d 8 f 1 17 39 19 e 5kb 0 153 bp exon 153 bp exon 138 bp uORF 414 bp [gt-ag] intron 6 GenBank accessions (also 258 Primates bodymap) 138 bp uORF 77 bp exon 77 bp exon 4146 bp [gt-ag] intron 6 GenBank accessions (also 595 Primates bodymap) 63 bp exon 63 bp exon 63 bp exon 5748 bp [gt-ag] intron 10 GenBank accessions 7 RNA-seq supporting reads 1 UHR pooled cells 3 Blood 3 Neuroblastoma (also 885 Primates bodymap) 111 bp exon 111 bp exon 185 bp [gt-ag] intron 11 GenBank accessions 28 RNA-seq supporting reads 1 UHR pooled cells 2 Brain 11 Blood 14 Neuroblastoma (also 1230 Primates bodymap) 129 bp exon 129 bp exon 2297 bp [gt-ag] intron 11 GenBank accessions 8 RNA-seq supporting reads 1 UHR pooled cells 1 Brain 3 Blood 3 Neuroblastoma (also 534 Primates bodymap) 129 bp exon 129 bp exon 1883 bp [gt-ag] intron 8 GenBank accessions 9 RNA-seq supporting reads 3 Blood 6 Neuroblastoma (also 656 Primates bodymap) 61 bp exon 61 bp exon 95 bp [gt-ag] intron 6 GenBank accessions 33 RNA-seq supporting reads 1 UHR pooled cells 1 Brain 6 Blood 23 Neuroblastoma 2 Other (also 1402 Primates bodymap) 116 bp exon 116 bp exon 105 bp [gt-ag] intron 5 GenBank accessions 89 RNA-seq supporting reads 4 UHR pooled cells 7 Brain 20 Blood 56 Neuroblastoma 2 Other (also 2429 Primates bodymap) 123 bp exon 123 bp exon 6770 bp [gt-ag] intron 6 GenBank accessions 99 RNA-seq supporting reads 5 UHR pooled cells 8 Brain 14 Blood 72 Neuroblastoma (also 1445 Primates bodymap) 153 bp exon 153 bp exon 1528 bp [gt-ag] intron 7 GenBank accessions 93 RNA-seq supporting reads 5 UHR pooled cells 5 Brain 13 Blood 70 Neuroblastoma (also 1193 Primates bodymap) 132 bp exon 132 bp exon 1959 bp [gt-ag] intron 5 GenBank accessions 79 RNA-seq supporting reads 1 UHR pooled cells 7 Brain 10 Blood 61 Neuroblastoma (also 1372 Primates bodymap) 126 bp exon 126 bp exon 2368 bp [gt-ag] intron 4 GenBank accessions 60 RNA-seq supporting reads 1 UHR pooled cells 1 Brain 3 Blood 55 Neuroblastoma (also 1774 Primates bodymap) 161 bp exon 161 bp exon 2279 bp [gt-ag] intron 6 GenBank accessions 78 RNA-seq supporting reads 2 UHR pooled cells 5 Brain 4 Blood 67 Neuroblastoma (also 1604 Primates bodymap) 347 bp exon 347 bp exon 1794 bp [gt-ag] intron 1 GenBank accession 15 RNA-seq supporting reads 1 UHR pooled cells 5 Blood 9 Neuroblastoma (also 1233 Primates bodymap) 65 bp exon 65 bp exon 593 bp [gt-ag] intron 1 GenBank accession 16 RNA-seq supporting reads 3 Blood 13 Neuroblastoma (also 761 Primates bodymap) 96 bp exon 96 bp exon 8124 bp [gt-ag] intron 4 GenBank accessions 5 RNA-seq supporting reads 1 UHR pooled cells 2 Brain 1 Blood 1 Neuroblastoma (also 205 Primates bodymap) 150 bp exon 150 bp exon 302 bp [gt-ag] intron 5 GenBank accessions 18 RNA-seq supporting reads 2 UHR pooled cells 1 Brain 3 Blood 12 Neuroblastoma (also 158 Primates bodymap) 66 bp exon 66 bp exon 3609 bp [gt-ag] intron 1 GenBank accession 9 RNA-seq supporting reads 9 Neuroblastoma (also 91 Primates bodymap) 188 bp exon 5 accessions, NM_001136505.1 some from testis (seen 2 times) 188 bp exon 50 bp exon 780 bp [gt-ag] intron 2 GenBank accessions 6 RNA-seq supporting reads 4 Brain 2 Neuroblastoma (also 1 Primates bodymap) 149 bp exon 149 bp exon 129 bp uORF 149 bp exon 3217 bp [gt-ag] intron 2 GenBank accessions (also 2 Primates bodymap) 63 bp exon 63 bp exon 63 bp exon 5748 bp [gt-ag] intron 10 GenBank accessions 7 RNA-seq supporting reads 1 UHR pooled cells 3 Blood 3 Neuroblastoma (also 885 Primates bodymap) 111 bp exon 111 bp exon 185 bp [gt-ag] intron 11 GenBank accessions 28 RNA-seq supporting reads 1 UHR pooled cells 2 Brain 11 Blood 14 Neuroblastoma (also 1230 Primates bodymap) 129 bp exon 129 bp exon 2297 bp [gt-ag] intron 11 GenBank accessions 8 RNA-seq supporting reads 1 UHR pooled cells 1 Brain 3 Blood 3 Neuroblastoma (also 534 Primates bodymap) 129 bp exon 129 bp exon 1883 bp [gt-ag] intron 8 GenBank accessions 9 RNA-seq supporting reads 3 Blood 6 Neuroblastoma (also 656 Primates bodymap) 61 bp exon 61 bp exon 95 bp [gt-ag] intron 6 GenBank accessions 33 RNA-seq supporting reads 1 UHR pooled cells 1 Brain 6 Blood 23 Neuroblastoma 2 Other (also 1402 Primates bodymap) 116 bp exon 116 bp exon 105 bp [gt-ag] intron 5 GenBank accessions 89 RNA-seq supporting reads 4 UHR pooled cells 7 Brain 20 Blood 56 Neuroblastoma 2 Other (also 2429 Primates bodymap) 123 bp exon 123 bp exon 6770 bp [gt-ag] intron 6 GenBank accessions 99 RNA-seq supporting reads 5 UHR pooled cells 8 Brain 14 Blood 72 Neuroblastoma (also 1445 Primates bodymap) 153 bp exon 153 bp exon 1528 bp [gt-ag] intron 7 GenBank accessions 93 RNA-seq supporting reads 5 UHR pooled cells 5 Brain 13 Blood 70 Neuroblastoma (also 1193 Primates bodymap) 132 bp exon 132 bp exon 1959 bp [gt-ag] intron 5 GenBank accessions 79 RNA-seq supporting reads 1 UHR pooled cells 7 Brain 10 Blood 61 Neuroblastoma (also 1372 Primates bodymap) 126 bp exon 126 bp exon 2368 bp [gt-ag] intron 4 GenBank accessions 60 RNA-seq supporting reads 1 UHR pooled cells 1 Brain 3 Blood 55 Neuroblastoma (also 1774 Primates bodymap) 161 bp exon 161 bp exon 2279 bp [gt-ag] intron 6 GenBank accessions 78 RNA-seq supporting reads 2 UHR pooled cells 5 Brain 4 Blood 67 Neuroblastoma (also 1604 Primates bodymap) 347 bp exon 347 bp exon 2452 bp [gt-ag] intron 7 GenBank accessions 43 RNA-seq supporting reads 3 UHR pooled cells 8 Brain 1 Blood 31 Neuroblastoma (also 80 Primates bodymap) 84 bp exon 84 bp exon 6 accessions, some from pooled cerebellum, kidney, placenta testis, lung, colon, liver heart, thyroid, bladder uterus, PCR rescued clones (seen once) 84 bp exon 155 bp exon 155 bp exon 138 bp uORF 414 bp [gt-ag] intron 6 GenBank accessions (also 258 Primates bodymap) 138 bp uORF 77 bp exon 77 bp exon 4146 bp [gt-ag] intron 6 GenBank accessions (also 595 Primates bodymap) 63 bp exon 63 bp exon 63 bp exon 5748 bp [gt-ag] intron 10 GenBank accessions 7 RNA-seq supporting reads 1 UHR pooled cells 3 Blood 3 Neuroblastoma (also 885 Primates bodymap) 111 bp exon 111 bp exon 185 bp [gt-ag] intron 11 GenBank accessions 28 RNA-seq supporting reads 1 UHR pooled cells 2 Brain 11 Blood 14 Neuroblastoma (also 1230 Primates bodymap) 129 bp exon 129 bp exon 2297 bp [gt-ag] intron 11 GenBank accessions 8 RNA-seq supporting reads 1 UHR pooled cells 1 Brain 3 Blood 3 Neuroblastoma (also 534 Primates bodymap) 129 bp exon 129 bp exon 1883 bp [gt-ag] intron 8 GenBank accessions 9 RNA-seq supporting reads 3 Blood 6 Neuroblastoma (also 656 Primates bodymap) 61 bp exon 61 bp exon 95 bp [gt-ag] intron 6 GenBank accessions 33 RNA-seq supporting reads 1 UHR pooled cells 1 Brain 6 Blood 23 Neuroblastoma 2 Other (also 1402 Primates bodymap) 116 bp exon 116 bp exon 105 bp [gt-ag] intron 5 GenBank accessions 89 RNA-seq supporting reads 4 UHR pooled cells 7 Brain 20 Blood 56 Neuroblastoma 2 Other (also 2429 Primates bodymap) 123 bp exon 123 bp exon 6770 bp [gt-ag] intron 6 GenBank accessions 99 RNA-seq supporting reads 5 UHR pooled cells 8 Brain 14 Blood 72 Neuroblastoma (also 1445 Primates bodymap) 153 bp exon 153 bp exon 1528 bp [gt-ag] intron 7 GenBank accessions 93 RNA-seq supporting reads 5 UHR pooled cells 5 Brain 13 Blood 70 Neuroblastoma (also 1193 Primates bodymap) 132 bp exon 132 bp exon 4453 bp [gt-ag] intron 2 GenBank accessions 1 RNA-seq supporting reads 1 Neuroblastoma (also 158 Primates bodymap) 161 bp exon 161 bp exon 2279 bp [gt-ag] intron 6 GenBank accessions 78 RNA-seq supporting reads 2 UHR pooled cells 5 Brain 4 Blood 67 Neuroblastoma (also 1604 Primates bodymap) 347 bp exon 347 bp exon 2452 bp [gt-ag] intron 7 GenBank accessions 43 RNA-seq supporting reads 3 UHR pooled cells 8 Brain 1 Blood 31 Neuroblastoma (also 80 Primates bodymap) 96 bp exon 96 bp exon 96 bp exon 8124 bp [gt-ag] intron 4 GenBank accessions 5 RNA-seq supporting reads 1 UHR pooled cells 2 Brain 1 Blood 1 Neuroblastoma (also 205 Primates bodymap) 150 bp exon 302 bp [gt-ag] intron 5 GenBank accessions 18 RNA-seq supporting reads 2 UHR pooled cells 1 Brain 3 Blood 12 Neuroblastoma (also 158 Primates bodymap) 8 accessions, some from testis (seen 5 times) Validated 3' end, 2 accessions 939 bp exon 40 bp exon 4740 bp [gt-ag] intron 1 GenBank accession (also 10 Primates bodymap) 63 bp exon 63 bp exon 5748 bp [gt-ag] intron 10 GenBank accessions 7 RNA-seq supporting reads 1 UHR pooled cells 3 Blood 3 Neuroblastoma (also 885 Primates bodymap) 111 bp exon 185 bp [gt-ag] intron 11 GenBank accessions 28 RNA-seq supporting reads 1 UHR pooled cells 2 Brain 11 Blood 14 Neuroblastoma (also 1230 Primates bodymap) 129 bp exon 2297 bp [gt-ag] intron 11 GenBank accessions 8 RNA-seq supporting reads 1 UHR pooled cells 1 Brain 3 Blood 3 Neuroblastoma (also 534 Primates bodymap) 129 bp exon 1883 bp [gt-ag] intron 8 GenBank accessions 9 RNA-seq supporting reads 3 Blood 6 Neuroblastoma (also 656 Primates bodymap) 61 bp exon 95 bp [gt-ag] intron 6 GenBank accessions 33 RNA-seq supporting reads 1 UHR pooled cells 1 Brain 6 Blood 23 Neuroblastoma 2 Other (also 1402 Primates bodymap) 32 bp exon 1 accession from testis capped 5' end, 1 accession 32 bp exon 96 bp exon 276 bp [gt-ag] intron 1 GenBank accession 7 RNA-seq supporting reads 4 UHR pooled cells 2 Neuroblastoma 1 Other (also 61 Primates bodymap) 535 bp exon 535 bp exon 1 accession from testis Validated 3' end, 1 accession 535 bp exon 117 bp exon 117 bp exon 162 bp uORF 4637 bp [gt-ag] intron 1 GenBank accession (also 42 Primates bodymap) 63 bp exon 162 bp uORF 63 bp exon 5748 bp [gt-ag] intron 10 GenBank accessions 7 RNA-seq supporting reads 1 UHR pooled cells 3 Blood 3 Neuroblastoma (also 885 Primates bodymap) 162 bp uORF 111 bp exon 111 bp exon 185 bp [gt-ag] intron 11 GenBank accessions 28 RNA-seq supporting reads 1 UHR pooled cells 2 Brain 11 Blood 14 Neuroblastoma (also 1230 Primates bodymap) 129 bp exon 129 bp exon 2297 bp [gt-ag] intron 11 GenBank accessions 8 RNA-seq supporting reads 1 UHR pooled cells 1 Brain 3 Blood 3 Neuroblastoma (also 534 Primates bodymap) 59 bp exon 1 accession from testis 59 bp exon Alternative mRNAs are shown aligned from 5' to 3' on a virtual genome where introns have been shrunk to a minimal length. Exon size is proportional to length, intron height reflects the number of cDNAs supporting each intron, the small numbers show the support of the introns in deep sequencing (with details in mouse-over) . Introns of the same color are identical, of different colors are different. 'Good proteins' are pink, partial or not-good proteins are yellow, uORFs are green. 5' cap or3' poly A flags show completeness of the transcript.
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Sequences: click on the numbers to get the DNA back to top
mRNA variant mRNA matching the genome Best predicted protein 5' UTR 3' UTR uORF Upstream sequence Transcription
unit
pre-mRNA		 Downstream sequence
aAug10 2446 bp 727 aa 262 bp 135 bp 2kb probably including promoter 46645 bp 1kb
bAug10 1934 bp 550 aa 231 bp 50 bp 126 bp 2kb possibly including promoter 33600 bp 1kb
cAug10 2942 bp 508 aa 264 bp 1151 bp 135 bp 2kb probably including promoter 43723 bp 1kb
dAug10 565 bp 164 aa 72 bp 2kb including Promoter 15513 bp 1kb
eAug10 479 bp 110 aa 149 bp 159 bp 2kb probably including promoter 13346 bp 1kb
fAug10 631 bp 57 aa 321 bp 136 bp 2kb 907 bp 1kb

Gene neighbors and Navigator on chromosome 16q22.1 back to top
C CDH5 D C I R P BEAN D C R P CKLFandCMTM1 D C R P CMTM2 D C R P CMTM3 C I R P R CA7 C R P PDP2 C I R P R CES2andCES3 C I R P CES8 C R P CBFB D C I R P C16orf70 C I R P FBXL8andHSF4 D C I R P NOL3 D C I R P E2F4 D C I R P ELMO3 C R P C TMEM208 C R P SLC9A5 C I R P PLEKHG4 FLJ27243 D C R P TK2 R C R P CMTM4 C I R P DYNC1LI2 C R CCDC79 D C I R P NAE1 R D C I R P CDH16 D C I R P FAM96BandRRAD C R B3GNT9 D C I R P TRADD C R P EXOC3LandKIAA0895L C R P LRRC29 C I R P FHOD1 100kb 0 deydo, 1 accession CDH5, 341 accessions, 13 variants BEAN, 63 accessions, 11 variants CKLFandCMTM1, 302 accessions 37 variants CMTM2, 97 accessions, 3 variants CMTM3, 490 accessions 16 variants tasiru, 7 accessions CA7, 32 accessions, 3 variants PDP2, 173 accessions, 12 variants flarsmer, 1 accession CES2andCES3, 575 accessions 21 variants CES8, 114 accessions, 13 variants CBFB, 310 accessions, 12 variants C16orf70, 139 accessions 13 variants FBXL8andHSF4, 226 accessions 27 variants NOL3, 222 accessions, 15 variants E2F4, 360 accessions, 15 variants ELMO3, 147 accessions 12 variants flawwoy, 2 accessions TMEM208, 259 accessions 10 variants SLC9A5, 82 accessions 10 variants werglo, 4 accessions tarwoybu, 1 accession steysnar, 1 accession storsnar, 1 accession zyglo, 1 accession nerru, 1 accession dordo, 3 accessions netiri, 38 accessions teywoybu, 1 accession torwoybu, 4 accessions tukori, 1 accession sworsnar, 1 accession toysto, 1 accession hahi, 2 accessions bysnaw, 2 accessions busnaw, 3 accessions blawwoy, 2 accessions bosnaw, 2 accessions varwoybu, 1 accession vawwoybu, 1 accession zeesto, 1 accession bersnaw, 1 accession bleywoy, 1 accession shusto, 1 accession dusnaw, 1 accession bleysto, 1 accession dawsnaw, 1 accession deesnaw, 1 accession voywoybu, 1 accession wawoybu, 1 accession wywoybu, 1 accession dorsnaw, 1 accession fasnaw, 1 accession ryra, 1 accession glosto, 1 accession farsnaw, 1 accession werwoybu, 2 accessions charglo, 1 accession plysto, 1 accession slasto, 2 accessions forsnaw, 2 accessions snysto, 1 accession bloywoy, 3 accessions worwoybu, 1 accession zarwoybu, 2 accessions rarra, 1 accession garsnaw, 3 accessions gawsnaw, 1 accession sakori, 1 accession gersnaw, 1 accession geysnaw, 1 accession snersto, 3 accessions gorsnaw, 1 accession goysnaw, 1 accession zorwoybu, 1 accession toyra, 1 accession starsto, 1 accession vara, 3 accessions josnaw, 1 accession swusto, 1 accession jarsnaw, 1 accession jawsnaw, 1 accession jeesnaw, 1 accession zyseybo, 1 accession jorsnaw, 2 accessions chowoybu, 1 accession flawobu, 2 accessions kusnaw, 1 accession kosnaw, 2 accessions karsnaw, 1 accession swawsto, 1 accession sweesto, 1 accession shawoybu, 3 accessions barstar, 1 accession showoybu, 1 accession keesnaw, 2 accessions sikori, 2 accessions keysnaw, 1 accession korsnaw, 1 accession koysnaw, 1 accession lasnaw, 3 accessions flawsmer, 3 accessions borstar, 1 accession lusnaw, 1 accession dawstar, 1 accession wawra, 2 accessions jystar, 1 accession losnaw, 2 accessions justar, 1 accession joystar, 5 accessions lersnaw, 2 accessions kastar, 2 accessions smarraw, 3 accessions zarra, 4 accessions mysnaw, 1 accession flowoy, 2 accessions marsnaw, 2 accessions meesnaw, 1 accession sherwoybu, 1 accession mersnaw, 1 accession lorstar, 1 accession loystar, 1 accession tawwoybu, 1 accession terwoybu, 1 accession resema, 2 accessions, 2 variants merra, 1 accession blawoy, 1 accession swawsnar, 1 accession sweesnar, 9 accessions werseybo, 2 accessions FLJ27243, 2 accessions tekori, 1 accession foydo, 8 accessions morra, 1 accession blarwoy, 1 accession gory, 1 accession basnaw, 1 accession moyra, 1 accession tokori, 1 accession veewoybu, 2 accessions verwoybu, 1 accession vorwoybu, 2 accessions zorglo, 2 accessions woyseybo, 1 accession deysnaw, 2 accessions wowoybu, 1 accession para, 1 accession doysnaw, 1 accession jary, 1 accession warwoybu, 3 accessions fysnaw, 1 accession fusnaw, 1 accession fosnaw, 4 accessions bleywobu, 1 accession fawsnaw, 7 accessions slawsto, 1 accession gasnaw, 1 accession gysnaw, 1 accession zaseybo, 1 accession zowoybu, 1 accession shyglo, 1 accession zeewoybu, 1 accession geesnaw, 1 accession syra, 1 accession jasnaw, 1 accession jysnaw, 1 accession sporsto, 1 accession stersto, 2 accessions swysto, 1 accession chawoybu, 1 accession jersnaw, 2 accessions chywoybu, 1 accession zuseybo, 1 accession zoseybo, 1 accession cherwoybu, 1 accession flywoy, 1 accession chorwoybu, 1 accession choywoybu, 2 accessions shoyglo, 2 accessions gado, 3 accessions warra, 1 accession lysnaw, 4 accessions blarglo, 4 accessions farstar, 1 accession larsnaw, 8 accessions jeystar, 1 accession leesnaw, 1 accession sheewoybu, 1 accession leysnaw, 1 accession lawstar, 1 accession loysnaw, 1 accession zeera, 1 accession masnaw, 2 accessions musnaw, 2 accessions flarwoy, 2 accessions mawsnaw, 1 accession plorzy, 2 accessions TK2, 277 accessions, 24 variants hisuri, 1 accession CMTM4, 285 accessions 4 variants DYNC1LI2, 380 accessions 17 variants CCDC79, 23 accessions 6 variants NAE1, 522 accessions, 28 variants jory, 4 accessions CDH16, 125 accessions 9 variants FAM96BandRRAD, 493 accessions 11 variants B3GNT9, 164 accessions TRADD, 175 accessions 7 variants EXOC3LandKIAA0895L, 279 accessions 21 variants LRRC29, 60 accessions 11 variants FHOD1, 251 accessions 12 variants ZOOM IN                D:disease,C:conserved,I:interactions,R:regulation,P:publications         Read more...
Annotated mRNA diagrams back to top
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C

To mine knowledge about the gene, please click the 'Gene Summary' or the 'Function, regulation, related genes ' tab at the top of the page. The 'Gene Summary' page includes all we learnt about the gene, functional annotations of neighboring genes, maps, links to other sites and the bibliography. The 'Function, regulation, related genes ' page includes Diseases (D), Pathways, GO annotations, conserved domains (C), interactions (I) reference into function, and pointers to all genes with the same functional annotation.
To compare alternative variants, their summarized annotations, predicted proteins, introns and exons, or to access any sequence, click the 'Alternative mRNAs features' tab. To see a specific mRNA variant diagram, sequence and annotation, click the variant name in the 'mRNA' tab. To examine expression data from all cDNAs clustered in this gene by AceView, click the 'Expression tissue'.

If you know more about this gene, or found errors, please share your knowledge. Thank you !