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HomoloGene:9502. Gene conserved in Eukaryota Download , Links
Genes
Genes identified as putative homologs of one another during the construction of HomoloGene.

Proteins
Proteins used in sequence comparisons and their conserved domain architectures.

CDK5RAP1,  H.sapiens
CDK5 regulatory subunit associated protein 1
NP_057492.2
587 aa
CDK5RAP1,  P.troglodytes
CDK5 regulatory subunit associated protein 1
XP_001155512.2
587 aa
CDK5RAP1,  C.lupus
CDK5 regulatory subunit associated protein 1
XP_005634997.1
583 aa
CDK5RAP1,  B.taurus
CDK5 regulatory subunit associated protein 1
NP_001069114.1
589 aa
Cdk5rap1,  M.musculus
CDK5 regulatory subunit associated protein 1
NP_080152.1
588 aa
Cdk5rap1,  R.norvegicus
CDK5 regulatory subunit associated protein 1
NP_663773.1
586 aa
CDK5RAP1,  G.gallus
CDK5 regulatory subunit associated protein 1
XP_417464.2
477 aa
cdk5rap1,  X.tropicalis
CDK5 regulatory subunit associated protein 1
NP_001017192.1
569 aa
zgc:162738,  D.rerio
zgc:162738
NP_001103849.1
577 aa
CG6345,  D.melanogaster
CG6345
NP_650002.1
583 aa
AgaP_AGAP012104,  A.gambiae
AgaP_AGAP012104
XP_320425.3
538 aa
F25B5.5,  C.elegans
F25B5.5
NP_498290.1
547 aa
AT4G36390,  A.thaliana
AT4G36390
NP_195357.2
640 aa
Os11g0592800,  O.sativa
Os11g0592800
NP_001068196.1
600 aa


Protein Alignments
Protein multiple alignment, pairwise similarity scores and evolutionary distances.

Show Multiple Alignment

Show Pairwise Alignment Scores

Pairwise alignments generated using BLAST
Regenerate Alignments




Publications
Articles associated with genes and sequences of this homology group.




Conserved Domains
Conserved Domains from CDD found in protein sequences by rpsblast searching.
Radical_SAM (cd01335)
  Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster. ...
UPF0004 (pfam00919)
  Uncharacterized protein family UPF0004.
TRAM (cl01282)
  TRAM domain.
UPF0004 (pfam00919)
  Uncharacterized protein family UPF0004.
DRE_TIM_metallolyase (cl18962)
  DRE-TIM metallolyase superfamily.



Related Homology Resources
Links to curated and computed homology information found in other databases.
Orthology group for M.musculus Cdk5rap1 includes H.sapiens CDK5RAP1 and R.norvegicus Cdk5rap1.



UniGene
Links to UniGene entries found by comparing the homologous proteins against the transcript database.

Chordata
Actinopterygii - bony fishes (14 transcripts, 8 species)
Mammalia - mammals (13 transcripts, 12 species)
Amphibia - amphibians (3 transcripts, 2 species)
Ascidiacea - tunicates (2 transcripts, 2 species)
Aves - birds (2 transcripts, 2 species)
Amniota - vertebrates (1 transcript, 1 species)
Cephalochordata - lancelets (1 transcript, 1 species)

Arthropoda
Insecta - insects (11 transcripts, 9 species)
Arachnida - arachnids (1 transcript, 1 species)
Branchiopoda - crustaceans (1 transcript, 1 species)
Maxillopoda - crustaceans (1 transcript, 1 species)

Platyhelminthes
Trematoda - flatworms (3 transcripts, 2 species)
Turbellaria - flatworms (1 transcript, 1 species)

Nematoda
Chromadorea - nematodes (2 transcripts, 2 species)

Annelida
Polychaeta - segmented worms (1 transcript, 1 species)
Hirudinida - segmented worms (1 transcript, 1 species)

Mollusca
Gastropoda - gastropods (1 transcript, 1 species)

Echinodermata
Echinoidea - sea urchins (1 transcript, 1 species)

Streptophyta
Eudicotyledons - eudicots (28 transcripts, 22 species)
Liliopsida - monocots (8 transcripts, 7 species)
Isoetopsida - club-mosses (2 transcripts, 1 species)
Bryopsida - mosses (1 transcript, 1 species)
Coniferopsida - conifers (1 transcript, 1 species)

Bacillariophyta
Bacillariophyceae - diatoms (2 transcripts, 1 species)

 

 

 

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