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HomoloGene:4721. Gene conserved in Tetrapoda Download , Links
Genes
Genes identified as putative homologs of one another during the construction of HomoloGene.

Proteins
Proteins used in sequence comparisons and their conserved domain architectures.

ARID3B,  H.sapiens
AT rich interactive domain 3B (BRIGHT-like)
NP_006456.1
560 aa
ARID3B,  P.troglodytes
AT rich interactive domain 3B (BRIGHT-like)
XP_529731.2
667 aa
ARID3B,  M.mulatta
AT rich interactive domain 3B (BRIGHT-like)
XP_001099559.2
712 aa
ARID3B,  C.lupus
AT rich interactive domain 3B (BRIGHT-like)
XP_544771.2
560 aa
ARID3B,  B.taurus
AT rich interactive domain 3B (BRIGHT-like)
NP_001179977.1
553 aa
Arid3b,  M.musculus
AT rich interactive domain 3B (BRIGHT-like)
NP_062663.1
568 aa
Arid3b,  R.norvegicus
AT rich interactive domain 3B (Bright like)
NP_001102471.1
565 aa
ARID3B,  G.gallus
AT rich interactive domain 3B (BRIGHT-like)
NP_001243086.1
561 aa
LOC100496484,  X.tropicalis
AT-rich interactive domain-containing protein 3B-like
XP_004916060.1
548 aa


Protein Alignments
Protein multiple alignment, pairwise similarity scores and evolutionary distances.

Show Multiple Alignment

Show Pairwise Alignment Scores

Pairwise alignments generated using BLAST
Regenerate Alignments




Publications
Articles associated with genes and sequences of this homology group.

miR-125b targets ARID3B in breast cancer cells.
Akhavantabasi S, et al. Cell Struct Funct 37, 27-38 (2012).
Epigenetic regulation of the neuroblastoma genes, Arid3b and Mycn.
Kobayashi K, et al. Oncogene 32, 2640-8 (2013).
ARID proteins come in from the desert.
Kortschak RD, et al. Trends Biochem Sci 25, 294-9 (2000).



Conserved Domains
Conserved Domains from CDD found in protein sequences by rpsblast searching.
ARID (pfam01388)
  ARID/BRIGHT DNA binding domain.
ARID (cl02633)
  ARID/BRIGHT DNA binding domain.



Related Homology Resources
Links to curated and computed homology information found in other databases.
Orthology group for M.musculus Arid3b includes H.sapiens ARID3B and R.norvegicus Arid3b.



UniGene
Links to UniGene entries found by comparing the homologous proteins against the transcript database.

Chordata
Mammalia - mammals (11 transcripts, 8 species)
Actinopterygii - bony fishes (3 transcripts, 2 species)
Aves - birds (1 transcript, 1 species)

 

 

 

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