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HomoloGene:2891. Gene conserved in Euteleostomi Download , Links
Genes
Genes identified as putative homologs of one another during the construction of HomoloGene.

Proteins
Proteins used in sequence comparisons and their conserved domain architectures.

LDB1,  H.sapiens
LIM domain binding 1
NP_001106878.1
411 aa
LDB1,  P.troglodytes
LIM domain binding 1
XP_001170821.1
375 aa
LDB1,  M.mulatta
LIM domain binding 1
XP_001111832.2
411 aa
LDB1,  C.lupus
LIM domain binding 1
XP_850926.2
411 aa
LDB1,  B.taurus
LIM domain binding 1
XP_002698495.1
365 aa
Ldb1,  M.musculus
LIM domain binding 1
NP_034827.1
375 aa
Ldb1,  R.norvegicus
LIM domain binding 1
NP_001101071.1
375 aa
LDB1,  G.gallus
LIM domain binding 1
NP_990401.1
411 aa
ldb1,  X.tropicalis
LIM domain binding 1
NP_998843.1
373 aa
ldb1b,  D.rerio
LIM-domain binding factor 1b
NP_571388.2
374 aa


Protein Alignments
Protein multiple alignment, pairwise similarity scores and evolutionary distances.

Show Multiple Alignment

Show Pairwise Alignment Scores

Pairwise alignments generated using BLAST
Regenerate Alignments




Publications
Articles associated with genes and sequences of this homology group.

Role of ldb1 in adult intestinal homeostasis.
Dey-Guha I, et al. Int J Biol Sci 5, 686-94 (2009).



Conserved Domains
Conserved Domains from CDD found in protein sequences by rpsblast searching.
LIM_bind (pfam01803)
  LIM-domain binding protein.
LIM_bind (pfam01803)
  LIM-domain binding protein.



Related Homology Resources
Links to curated and computed homology information found in other databases.
Orthology group for M.musculus Ldb1 includes H.sapiens LDB1 and R.norvegicus Ldb1.



UniGene
Links to UniGene entries found by comparing the homologous proteins against the transcript database.

Chordata
Actinopterygii - bony fishes (21 transcripts, 8 species)
Mammalia - mammals (11 transcripts, 11 species)
Amphibia - amphibians (5 transcripts, 2 species)
Aves - birds (1 transcript, 1 species)

Nematoda
Chromadorea - nematodes (1 transcript, 1 species)

 

 

 

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