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HomoloGene:48322. Gene conserved in Eukaryota Download , Links
Genes
Genes identified as putative homologs of one another during the construction of HomoloGene.

Proteins
Proteins used in sequence comparisons and their conserved domain architectures.

RAD23A,  H.sapiens
RAD23 homolog A (S. cerevisiae)
NP_005044.1
363 aa
RAD23A,  P.troglodytes
RAD23 homolog A (S. cerevisiae)
XP_003316200.1
463 aa
RAD23A,  C.lupus
RAD23 homolog A (S. cerevisiae)
XP_542038.2
362 aa
RAD23A,  B.taurus
RAD23 homolog A (S. cerevisiae)
NP_001076083.1
362 aa
Rad23a,  M.musculus
RAD23a homolog (S. cerevisiae)
NP_033036.2
362 aa
Rad23a,  R.norvegicus
RAD23 homolog A (S. cerevisiae)
NP_001013208.1
351 aa
rad23aa,  D.rerio
RAD23 homolog Aa (S. cerevisiae)
NP_001003739.1
362 aa
RAD23B,  A.thaliana
RAD23B
NP_001185439.1
395 aa
RAD23A,  A.thaliana
RAD23A
NP_173070.1
368 aa
Os02g0179300,  O.sativa
Os02g0179300
NP_001046083.1
369 aa


Protein Alignments
Protein multiple alignment, pairwise similarity scores and evolutionary distances.

Show Multiple Alignment

Show Pairwise Alignment Scores

Pairwise alignments generated using BLAST
Regenerate Alignments




Publications
Articles associated with genes and sequences of this homology group.

Structural and biochemical studies of the open state of Lys48-linked diubiquitin.
Lai MY, et al. Biochim Biophys Acta 1823, 2046-56 (2012).



Conserved Domains
Conserved Domains from CDD found in protein sequences by rpsblast searching.
XPC-binding (pfam09280)
  XPC-binding domain.
UBQ (cl00155)
  Ubiquitin-like proteins.
UBQ (cl00155)
  Ubiquitin-like proteins.
UBA (cl00153)
  Ubiquitin Associated domain. The UBA domain is a commonly occurring sequence motif in some members of the ubiquitination pathway, UV excision repair proteins, and certain protein kinases. Although its specific role is so far unknown, it has been suggested that UBA domains are involved in conferring protein target specificity. The domain, a compact three helix bundle, has a conserved GFP-loop and the proline is thought to be critical for binding. The UBA domain is distinct from the conserved three helical domain seen in the N-terminus of EF-TS and eukaryotic NAC proteins.



Related Homology Resources
Links to curated and computed homology information found in other databases.
Orthology group for M.musculus Rad23a includes H.sapiens RAD23A and R.norvegicus Rad23a.



UniGene
Links to UniGene entries found by comparing the homologous proteins against the transcript database.

Streptophyta
Eudicotyledons - eudicots (78 transcripts, 34 species)
Liliopsida - monocots (13 transcripts, 9 species)
Coniferopsida - conifers (7 transcripts, 3 species)
Bryopsida - mosses (4 transcripts, 1 species)

Chlorophyta
Chlorophyceae - green algae (1 transcript, 1 species)

Chordata
Mammalia - mammals (13 transcripts, 12 species)
Actinopterygii - bony fishes (4 transcripts, 4 species)
Cephalochordata - lancelets (3 transcripts, 1 species)
Ascidiacea - tunicates (2 transcripts, 2 species)
Aves - birds (2 transcripts, 2 species)

Arthropoda
Insecta - insects (7 transcripts, 5 species)

Platyhelminthes
Trematoda - flatworms (2 transcripts, 2 species)

Nematoda
Chromadorea - nematodes (1 transcript, 1 species)

Ascomycota
Sordariomycetes - ascomycetes (1 transcript, 1 species)

Bacillariophyta
Bacillariophyceae - diatoms (1 transcript, 1 species)

 

 

 

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