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HomoloGene:1251. Gene conserved in Bilateria Download , Links
Genes
Genes identified as putative homologs of one another during the construction of HomoloGene.

Proteins
Proteins used in sequence comparisons and their conserved domain architectures.

TRIM23,  H.sapiens
tripartite motif containing 23
NP_001647.1
574 aa
TRIM23,  P.troglodytes
tripartite motif containing 23
XP_001163376.1
574 aa
TRIM23,  M.mulatta
tripartite motif containing 23
XP_001085950.2
574 aa
TRIM23,  C.lupus
tripartite motif containing 23
XP_544360.1
574 aa
TRIM23,  B.taurus
tripartite motif containing 23
NP_001073772.1
581 aa
Trim23,  M.musculus
tripartite motif-containing 23
NP_109656.1
554 aa
Trim23,  R.norvegicus
tripartite motif-containing 23
NP_001094107.1
574 aa
TRIM23,  G.gallus
tripartite motif containing 23
XP_424752.2
715 aa
trim23,  X.tropicalis
tripartite motif containing 23
XP_002934252.2
577 aa
trim23,  D.rerio
tripartite motif containing 23
NP_001070112.1
423 aa
arc-1,  C.elegans
arc-1
NP_496089.3
539 aa


Protein Alignments
Protein multiple alignment, pairwise similarity scores and evolutionary distances.

Show Multiple Alignment

Show Pairwise Alignment Scores

Pairwise alignments generated using BLAST
Regenerate Alignments




Publications
Articles associated with genes and sequences of this homology group.




Conserved Domains
Conserved Domains from CDD found in protein sequences by rpsblast searching.
BBC (smart00502)
  B-Box C-terminal domain.
zf-C3HC4_2 (pfam13923)
  Zinc finger, C3HC4 type (RING finger).
P-loop_NTPase (cl09099)
  P-loop containing Nucleoside Triphosphate Hydrolases.
zf-B_box (pfam00643)
  B-box zinc finger.
BBOX (cl00034)
  B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.
Ras_like_GTPase (cl17170)
  Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases).
BBOX (cl00034)
  B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.
Ras_like_GTPase (cl17170)
  Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases).
RING (cl17238)
  RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably ...



Related Homology Resources
Links to curated and computed homology information found in other databases.
Orthology group for M.musculus Trim23 includes H.sapiens TRIM23 and R.norvegicus Trim23.



UniGene
Links to UniGene entries found by comparing the homologous proteins against the transcript database.

Chordata
Mammalia - mammals (12 transcripts, 11 species)
Actinopterygii - bony fishes (8 transcripts, 7 species)
Amniota - vertebrates (2 transcripts, 1 species)
Ascidiacea - tunicates (2 transcripts, 2 species)
Amphibia - amphibians (2 transcripts, 2 species)
Aves - birds (1 transcript, 1 species)

Arthropoda
Insecta - insects (2 transcripts, 2 species)

Nematoda
Chromadorea - nematodes (1 transcript, 1 species)

Echinodermata
Echinoidea - sea urchins (1 transcript, 1 species)

 

 

 

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