Display Settings:

Format

Send to:

Choose Destination

Links from PubMed

HomoloGene:22421. Gene conserved in Euteleostomi Download , Links
Genes
Genes identified as putative homologs of one another during the construction of HomoloGene.

Proteins
Proteins used in sequence comparisons and their conserved domain architectures.

COL13A1,  H.sapiens
collagen, type XIII, alpha 1
NP_542991.3
695 aa
COL13A1,  P.troglodytes
collagen, type XIII, alpha 1
XP_001170095.2
695 aa
LOC716986,  M.mulatta
collagen alpha-1(XIII) chain-like
XP_001108092.2
816 aa
COL13A1,  C.lupus
collagen, type XIII, alpha 1
XP_851871.3
718 aa
COL13A1,  B.taurus
collagen, type XIII, alpha 1
NP_001098903.1
686 aa
Col13a1,  M.musculus
collagen, type XIII, alpha 1
NP_031757.1
739 aa
Col13a1,  R.norvegicus
collagen, type XIII, alpha 1
NP_001102642.1
739 aa
COL13A1,  G.gallus
collagen, type XIII, alpha 1
XP_004942061.1
739 aa
LOC100498211,  X.tropicalis
collagen alpha-1(XIII) chain-like
XP_002935816.2
748 aa
wu:fb83c11,  D.rerio
wu:fb83c11
XP_003199746.2
673 aa


Protein Alignments
Protein multiple alignment, pairwise similarity scores and evolutionary distances.

Show Multiple Alignment

Show Pairwise Alignment Scores

Pairwise alignments generated using BLAST
Regenerate Alignments




Publications
Articles associated with genes and sequences of this homology group.




Conserved Domains
Conserved Domains from CDD found in protein sequences by rpsblast searching.
Collagen (cl19732)
  Collagen triple helix repeat (20 copies).



Related Homology Resources
Links to curated and computed homology information found in other databases.
Orthology group for M.musculus Col13a1 includes H.sapiens COL13A1 and R.norvegicus Col13a1.



UniGene
Links to UniGene entries found by comparing the homologous proteins against the transcript database.

Chordata
Mammalia - mammals (7 transcripts, 7 species)
Ascidiacea - tunicates (5 transcripts, 2 species)
Actinopterygii - bony fishes (2 transcripts, 2 species)
Aves - birds (1 transcript, 1 species)
Cephalochordata - lancelets (1 transcript, 1 species)

Arthropoda
Insecta - insects (3 transcripts, 3 species)

Cnidaria
Hydrozoa - hydrozoans (1 transcript, 1 species)
Anthozoa - anthozoans (1 transcript, 1 species)

Mollusca
Gastropoda - gastropods (1 transcript, 1 species)

Porifera
Demospongiae - sponges (1 transcript, 1 species)

Platyhelminthes
Trematoda - flatworms (1 transcript, 1 species)

Annelida
Hirudinida - segmented worms (1 transcript, 1 species)

Echinodermata
Echinoidea - sea urchins (1 transcript, 1 species)

 

 

 

Support Center