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HomoloGene:124010. Gene conserved in Eukaryota Download , Links
Genes
Genes identified as putative homologs of one another during the construction of HomoloGene.

Proteins
Proteins used in sequence comparisons and their conserved domain architectures.

rdp1,  S.pombe
rdp1
NP_593295.1
1215 aa
MGG_02748,  M.oryzae
MGG_02748
XP_003721007.1
1407 aa
NCU02178,  N.crassa
NCU02178
XP_964248.2
1049 aa
RDR1,  A.thaliana
RDR1
NP_172932.1
1107 aa
RDR2,  A.thaliana
RDR2
NP_192851.1
1133 aa
RDR6,  A.thaliana
RDR6
NP_190519.1
1196 aa
Os02g0736200,  O.sativa
Os02g0736200
NP_001048051.1
476 aa


Protein Alignments
Protein multiple alignment, pairwise similarity scores and evolutionary distances.

Show Multiple Alignment

Show Pairwise Alignment Scores

Pairwise alignments generated using BLAST
Regenerate Alignments




Publications
Articles associated with genes and sequences of this homology group.

Biochemical activities of Arabidopsis RNA-dependent RNA polymerase 6.
Curaba J & Chen X. J Biol Chem 283, 3059-66 (2008).



Conserved Domains
Conserved Domains from CDD found in protein sequences by rpsblast searching.
RdRP (pfam05183)
  RNA dependent RNA polymerase.
RRM_SF (cl17169)
  RNA recognition motif (RRM) superfamily.



UniGene
Links to UniGene entries found by comparing the homologous proteins against the transcript database.

Streptophyta
Eudicotyledons - eudicots (59 transcripts, 30 species)
Liliopsida - monocots (26 transcripts, 8 species)
Coniferopsida - conifers (4 transcripts, 2 species)

Arthropoda
Arachnida - arachnids (1 transcript, 1 species)

Nematoda
Chromadorea - nematodes (1 transcript, 1 species)

Annelida
Polychaeta - segmented worms (1 transcript, 1 species)

Ascomycota
Pezizomycetes - ascomycetes (1 transcript, 1 species)

Basidiomycota
Heterobasidiomycetes - basidiomycetes (1 transcript, 1 species)

 

 

 

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