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HomoloGene:1859. Gene conserved in Eukaryota Download , Links
Genes
Genes identified as putative homologs of one another during the construction of HomoloGene.

Proteins
Proteins used in sequence comparisons and their conserved domain architectures.

NCBP1,  H.sapiens
nuclear cap binding protein subunit 1, 80kDa
NP_002477.1
790 aa
NCBP1,  P.troglodytes
nuclear cap binding protein subunit 1, 80kDa
XP_520138.3
790 aa
NCBP1,  M.mulatta
nuclear cap binding protein subunit 1, 80kDa
XP_002800094.1
870 aa
NCBP1,  C.lupus
nuclear cap binding protein subunit 1, 80kDa
XP_532003.2
790 aa
NCBP1,  B.taurus
nuclear cap binding protein subunit 1, 80kDa
XP_003586450.1
790 aa
Ncbp1,  M.musculus
nuclear cap binding protein subunit 1
NP_001028373.2
790 aa
Ncbp1,  R.norvegicus
nuclear cap binding protein subunit 1
NP_001014785.1
790 aa
NCBP1,  G.gallus
nuclear cap binding protein subunit 1, 80kDa
NP_001026611.1
793 aa
ncbp1,  X.tropicalis
nuclear cap binding protein subunit 1, 80kDa
NP_001006788.1
791 aa
Cbp80,  D.melanogaster
cap binding protein 80
NP_524750.2
800 aa
NCBP1_ANOGA,  A.gambiae
NCBP1_ANOGA
XP_321964.4
807 aa
ncbp-1,  C.elegans
ncbp-1
NP_491850.2
798 aa
ABH1,  A.thaliana
ABH1
NP_565356.1
848 aa
Os03g0347200,  O.sativa
Os03g0347200
NP_001050097.1
867 aa


Protein Alignments
Protein multiple alignment, pairwise similarity scores and evolutionary distances.

Show Multiple Alignment

Show Pairwise Alignment Scores

Pairwise alignments generated using BLAST
Regenerate Alignments




Publications
Articles associated with genes and sequences of this homology group.

Cellular cap-binding proteins associate with influenza virus mRNAs.
Bier K, et al. J Gen Virol 92, 1627-34 (2011).
Cotranscriptional mRNP assembly: from the DNA to the nuclear pore.
Aguilera A. Curr Opin Cell Biol 17, 242-50 (2005).
Intron splicing suppresses RNA silencing in Arabidopsis.
Christie M, et al. Plant J 68, 159-67 (2011).



Conserved Domains
Conserved Domains from CDD found in protein sequences by rpsblast searching.
MIF4G (cl02652)
  MIF4G domain.



Related Homology Resources
Links to curated and computed homology information found in other databases.
Orthology group for M.musculus Ncbp1 includes H.sapiens NCBP1 and R.norvegicus Ncbp1.



UniGene
Links to UniGene entries found by comparing the homologous proteins against the transcript database.

Chordata
Actinopterygii - bony fishes (19 transcripts, 10 species)
Mammalia - mammals (17 transcripts, 15 species)
Ascidiacea - tunicates (4 transcripts, 3 species)
Amphibia - amphibians (3 transcripts, 2 species)
Cephalochordata - lancelets (2 transcripts, 1 species)
Amniota - vertebrates (1 transcript, 1 species)
Aves - birds (1 transcript, 1 species)
Hyperoartia - vertebrates (1 transcript, 1 species)

Arthropoda
Insecta - insects (12 transcripts, 9 species)
Arachnida - arachnids (4 transcripts, 2 species)
Branchiopoda - crustaceans (1 transcript, 1 species)
Maxillopoda - crustaceans (1 transcript, 1 species)

Mollusca
Gastropoda - gastropods (3 transcripts, 2 species)

Cnidaria
Hydrozoa - hydrozoans (2 transcripts, 1 species)
Anthozoa - anthozoans (1 transcript, 1 species)

Platyhelminthes
Trematoda - flatworms (2 transcripts, 2 species)

Annelida
Polychaeta - segmented worms (1 transcript, 1 species)
Hirudinida - segmented worms (1 transcript, 1 species)

Echinodermata
Echinoidea - sea urchins (2 transcripts, 2 species)

Nematoda
Chromadorea - nematodes (1 transcript, 1 species)

Streptophyta
Eudicotyledons - eudicots (27 transcripts, 21 species)
Liliopsida - monocots (9 transcripts, 8 species)

Ascomycota
Pezizomycetes - ascomycetes (1 transcript, 1 species)

 

 

 

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