Display Settings:

Format

Send to:

Choose Destination

Links from PubMed

HomoloGene:7276. Gene conserved in Euteleostomi Download , Links
Genes
Genes identified as putative homologs of one another during the construction of HomoloGene.

Proteins
Proteins used in sequence comparisons and their conserved domain architectures.

Col17a1,  M.musculus
collagen, type XVII, alpha 1
NP_031758.2
1433 aa
Col17a1,  R.norvegicus
collagen, type XVII, alpha 1
NP_001099836.1
1427 aa
COL17A1,  G.gallus
collagen, type XVII, alpha 1
XP_421744.4
1582 aa
col17a1,  X.tropicalis
collagen, type XVII, alpha 1
XP_002936853.2
1463 aa
col17a1b,  D.rerio
collagen, type XVII, alpha 1b
XP_697241.4
1542 aa


Protein Alignments
Protein multiple alignment, pairwise similarity scores and evolutionary distances.

Show Multiple Alignment

Show Pairwise Alignment Scores

Pairwise alignments generated using BLAST
Regenerate Alignments




Publications
Articles associated with genes and sequences of this homology group.




Conserved Domains
Conserved Domains from CDD found in protein sequences by rpsblast searching.
Collagen (cl19732)
  Collagen triple helix repeat (20 copies).



Related Homology Resources
Links to curated and computed homology information found in other databases.
Orthology group for M.musculus Col17a1 includes H.sapiens COL17A1 and R.norvegicus Col17a1.



UniGene
Links to UniGene entries found by comparing the homologous proteins against the transcript database.

Chordata
Mammalia - mammals (9 transcripts, 8 species)
Amniota - vertebrates (1 transcript, 1 species)
Aves - birds (1 transcript, 1 species)

Annelida
Hirudinida - segmented worms (1 transcript, 1 species)

 

 

 

Support Center