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HomoloGene:4786. Gene conserved in Euteleostomi Download , Links
Genes
Genes identified as putative homologs of one another during the construction of HomoloGene.

Proteins
Proteins used in sequence comparisons and their conserved domain architectures.

CTCF,  H.sapiens
CCCTC-binding factor (zinc finger protein)
NP_006556.1
727 aa
CTCF,  P.troglodytes
CCCTC-binding factor (zinc finger protein)
XP_511035.2
727 aa
CTCF,  M.mulatta
CCCTC-binding factor (zinc finger protein)
XP_001091862.2
696 aa
CTCF,  C.lupus
CCCTC-binding factor (zinc finger protein)
XP_864432.1
727 aa
CTCF,  B.taurus
CCCTC-binding factor (zinc finger protein)
NP_001069216.1
727 aa
Ctcf,  M.musculus
CCCTC-binding factor
NP_851839.1
736 aa
Ctcf,  R.norvegicus
CCCTC-binding factor (zinc finger protein)
NP_114012.1
737 aa
CTCF,  G.gallus
CCCTC-binding factor (zinc finger protein)
NP_990663.1
728 aa
ctcf,  X.tropicalis
CCCTC-binding factor (zinc finger protein)
NP_001116268.1
734 aa
ctcf,  D.rerio
CCCTC-binding factor (zinc finger protein)
NP_001001844.1
798 aa


Protein Alignments
Protein multiple alignment, pairwise similarity scores and evolutionary distances.

Show Multiple Alignment

Show Pairwise Alignment Scores

Pairwise alignments generated using BLAST
Regenerate Alignments




Publications
Articles associated with genes and sequences of this homology group.

A genome-wide map of CTCF multivalency redefines the CTCF code.
Nakahashi H, et al. Cell Rep 3, 1678-1689 (2013).
Chromatin insulators: linking genome organization to cellular function.
Phillips-Cremins JE & Corces VG. Mol Cell 50, 461-74 (2013).



Conserved Domains
Conserved Domains from CDD found in protein sequences by rpsblast searching.
zf-H2C2_2 (pfam13465)
  Zinc-finger double domain.
zf-H2C2_2 (cl19539)
  Zinc-finger double domain.



Related Homology Resources
Links to curated and computed homology information found in other databases.
Orthology group for M.musculus Ctcf includes H.sapiens CTCF and R.norvegicus Ctcf.



UniGene
Links to UniGene entries found by comparing the homologous proteins against the transcript database.

Chordata
Mammalia - mammals (20 transcripts, 13 species)
Actinopterygii - bony fishes (13 transcripts, 9 species)
Ascidiacea - tunicates (2 transcripts, 2 species)
Aves - birds (2 transcripts, 2 species)
Amphibia - amphibians (2 transcripts, 2 species)
Amniota - vertebrates (1 transcript, 1 species)
Cephalochordata - lancelets (1 transcript, 1 species)
Hyperoartia - vertebrates (1 transcript, 1 species)

Arthropoda
Arachnida - arachnids (1 transcript, 1 species)
Branchiopoda - crustaceans (1 transcript, 1 species)
Maxillopoda - crustaceans (1 transcript, 1 species)

Echinodermata
Echinoidea - sea urchins (1 transcript, 1 species)

 

 

 

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