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HomoloGene:40305. Gene conserved in Eukaryota Download , Links
Genes
Genes identified as putative homologs of one another during the construction of HomoloGene.

Proteins
Proteins used in sequence comparisons and their conserved domain architectures.

MGG_04926,  M.oryzae
MGG_04926
XP_003712417.1
396 aa
NCU09882,  N.crassa
NCU09882
XP_958649.2
454 aa
MC2,  A.thaliana
MC2
NP_194241.3
418 aa
AMC1,  A.thaliana
AMC1
NP_171719.2
367 aa
Os03g0389000,  O.sativa
Os03g0389000
NP_001050268.1
400 aa
Os03g0389400,  O.sativa
Os03g0389400
NP_001050270.1
369 aa


Protein Alignments
Protein multiple alignment, pairwise similarity scores and evolutionary distances.

Show Multiple Alignment

Show Pairwise Alignment Scores

Pairwise alignments generated using BLAST
Regenerate Alignments




Publications
Articles associated with genes and sequences of this homology group.

A caspase-related protease regulates apoptosis in yeast.
Madeo F, et al. Mol Cell 9, 911-7 (2002).
Crystal structure of the yeast metacaspase Yca1.
Wong AH, et al. J Biol Chem 287, 29251-9 (2012).



Conserved Domains
Conserved Domains from CDD found in protein sequences by rpsblast searching.
zf-LSD1 (cl06136)
  LSD1 zinc finger.
Peptidase_C14 (pfam00656)
  Caspase domain.
CASc (cl00042)
  Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...



UniGene
Links to UniGene entries found by comparing the homologous proteins against the transcript database.

Streptophyta
Eudicotyledons - eudicots (49 transcripts, 30 species)
Liliopsida - monocots (25 transcripts, 8 species)
Coniferopsida - conifers (7 transcripts, 3 species)
Bryopsida - mosses (2 transcripts, 1 species)

Ascomycota
Sordariomycetes - ascomycetes (11 transcripts, 3 species)
Eurotiomycetes - ascomycetes (1 transcript, 1 species)
Pezizomycetes - ascomycetes (1 transcript, 1 species)

Basidiomycota
Heterobasidiomycetes - basidiomycetes (1 transcript, 1 species)

Bacillariophyta
Bacillariophyceae - diatoms (3 transcripts, 1 species)

Codonosigidae
Monosiga - choanoflagellates (2 transcripts, 1 species)

Apicomplexa
Coccidia - apicomplexans (1 transcript, 1 species)

 

 

 

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