Display Settings:

Format

Send to:

Choose Destination

Links from PubMed

HomoloGene:5169. Gene conserved in Eukaryota Download , Links
Genes
Genes identified as putative homologs of one another during the construction of HomoloGene.

Proteins
Proteins used in sequence comparisons and their conserved domain architectures.

VIL1,  H.sapiens
villin 1
NP_009058.2
827 aa
VIL1,  P.troglodytes
villin 1
XP_001157250.2
827 aa
VIL1,  M.mulatta
villin 1
XP_001090524.1
827 aa
VIL1,  C.lupus
villin 1
XP_545642.2
827 aa
VIL1,  B.taurus
villin 1
NP_001013609.1
827 aa
Vil1,  M.musculus
villin 1
NP_033535.2
827 aa
Vil1,  R.norvegicus
villin 1
NP_001101694.1
827 aa
VIL1,  G.gallus
villin 1
NP_990773.1
826 aa
vil1,  X.tropicalis
villin 1
NP_001096367.1
824 aa
vil1,  D.rerio
villin 1
NP_956532.1
834 aa
VLN4,  A.thaliana
VLN4
NP_194745.1
974 aa
AT5G57320,  A.thaliana
AT5G57320
NP_200542.1
962 aa
Os08g0240800,  O.sativa
Os08g0240800
NP_001061335.1
955 aa
Os04g0604000,  O.sativa
Os04g0604000
NP_001053784.1
946 aa
Os06g0659300,  O.sativa
Os06g0659300
NP_001058263.1
1016 aa


Protein Alignments
Protein multiple alignment, pairwise similarity scores and evolutionary distances.

Show Multiple Alignment

Show Pairwise Alignment Scores

Pairwise alignments generated using BLAST
Regenerate Alignments




Phenotypes
Phenotypic information for the genes in this entry imported from model organism databases.

H.sapiens
Cholestasis, progressive canalicular.



Publications
Articles associated with genes and sequences of this homology group.

Heterogeneity and dynamics in villin headpiece crystal structures.
Meng J & McKnight CJ. Acta Crystallogr D Biol Crystallogr 65, 470-6 (2009).
Villin1, a novel diagnostic marker for cervical adenocarcinoma.
Nakamura E, et al. Cancer Biol Ther 8, 1146-53 (2009).



Conserved Domains
Conserved Domains from CDD found in protein sequences by rpsblast searching.
VHP (cl02491)
  Villin headpiece domain.
ADF_gelsolin (cl15697)
  Actin depolymerization factor/cofilin- and gelsolin-like domains.
DUF4628 (pfam15429)
  Domain of unknown function (DUF4628).
ADF_gelsolin (cl15697)
  Actin depolymerization factor/cofilin- and gelsolin-like domains.



Related Homology Resources
Links to curated and computed homology information found in other databases.
Orthology group for M.musculus Vil1 includes H.sapiens VIL1 and R.norvegicus Vil1.



UniGene
Links to UniGene entries found by comparing the homologous proteins against the transcript database.

Chordata
Actinopterygii - bony fishes (12 transcripts, 7 species)
Mammalia - mammals (10 transcripts, 8 species)
Aves - birds (3 transcripts, 2 species)
Amphibia - amphibians (3 transcripts, 2 species)
Amniota - vertebrates (2 transcripts, 1 species)

Arthropoda
Arachnida - arachnids (1 transcript, 1 species)
Branchiopoda - crustaceans (1 transcript, 1 species)

Cnidaria
Hydrozoa - hydrozoans (1 transcript, 1 species)

Streptophyta
Eudicotyledons - eudicots (3 transcripts, 3 species)
Liliopsida - monocots (1 transcript, 1 species)

Oomycetes
Peronosporales - oomycetes (1 transcript, 1 species)

Codonosigidae
Monosiga - choanoflagellates (1 transcript, 1 species)

 

 

 

Support Center