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Links from Protein

HomoloGene:7857. Gene conserved in Euteleostomi Download , Links
Genes identified as putative homologs of one another during the construction of HomoloGene.

Proteins used in sequence comparisons and their conserved domain architectures.

MYOD1,  H.sapiens
myogenic differentiation 1
320 aa
MYOD1,  P.troglodytes
myogenic differentiation 1
320 aa
MYOD1,  M.mulatta
myogenic differentiation 1
319 aa
MYOD1,  C.lupus
myogenic differentiation 1
319 aa
MYOD1,  B.taurus
myogenic differentiation 1
318 aa
Myod1,  M.musculus
myogenic differentiation 1
318 aa
Myod1,  R.norvegicus
myogenic differentiation 1
318 aa
MYOD1,  G.gallus
myogenic differentiation 1
298 aa
myod1,  X.tropicalis
myogenic differentiation 1
288 aa
myod1,  D.rerio
myogenic differentiation 1
275 aa

Protein Alignments
Protein multiple alignment, pairwise similarity scores and evolutionary distances.

Show Multiple Alignment

Show Pairwise Alignment Scores

Pairwise alignments generated using BLAST
Regenerate Alignments

Articles associated with genes and sequences of this homology group.

Hedgehog signaling regulates MyoD expression and activity.
Voronova A, et al. J Biol Chem 288, 4389-404 (2013).
MYOD-1 in normal colonic mucosa--role as a putative biomarker?
Arasaradnam RP, et al. BMC Res Notes 5, 240 (2012).
Finding MyoD with a little help from my friends.
Lassar A. Nat Cell Biol 14, 116 (2012).

Conserved Domains
Conserved Domains from CDD found in protein sequences by rpsblast searching.
Basic (pfam01586)
  Myogenic Basic domain.
Myf5 (pfam12232)
  Myogenic determination factor 5.
Myf5 (pfam12232)
  Myogenic determination factor 5.
HLH (cl00081)
  Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
Basic (cl11603)
  Myogenic Basic domain.

Related Homology Resources
Links to curated and computed homology information found in other databases.
Orthology group for M.musculus Myod1 includes H.sapiens MYOD1 and R.norvegicus Myod1.

Links to UniGene entries found by comparing the homologous proteins against the transcript database.

Actinopterygii - bony fishes (13 transcripts, 8 species)
Mammalia - mammals (7 transcripts, 7 species)
Amphibia - amphibians (3 transcripts, 2 species)
Aves - birds (2 transcripts, 2 species)
Cephalochordata - lancelets (2 transcripts, 1 species)




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