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Links from Nucleotide

HomoloGene:10340. Gene conserved in Euteleostomi Download , Links
Genes
Genes identified as putative homologs of one another during the construction of HomoloGene.

Proteins
Proteins used in sequence comparisons and their conserved domain architectures.

CLN8,  H.sapiens
ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)
NP_061764.2
286 aa
CLN8,  P.troglodytes
ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)
XP_519584.2
286 aa
CLN8,  M.mulatta
ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)
XP_001096231.1
286 aa
CLN8,  C.lupus
ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)
NP_001012343.1
288 aa
CLN8,  B.taurus
ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)
NP_001069409.2
278 aa
Cln8,  M.musculus
ceroid-lipofuscinosis, neuronal 8
NP_036130.1
288 aa
Cln8,  R.norvegicus
ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)
NP_001007687.1
288 aa
CLN8,  G.gallus
ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)
NP_001026258.1
285 aa
cln8,  X.tropicalis
ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)
XP_004914543.1
298 aa
cln8,  D.rerio
ceroid-lipofuscinosis, neuronal 8
NP_001108060.1
272 aa


Protein Alignments
Protein multiple alignment, pairwise similarity scores and evolutionary distances.

Show Multiple Alignment

Show Pairwise Alignment Scores

Pairwise alignments generated using BLAST
Regenerate Alignments




Phenotypes
Phenotypic information for the genes in this entry imported from model organism databases.

H.sapiens
Ceroid lipofuscinosis, neuronal 8.
Ceroid lipofuscinosis, neuronal, 8, Northern epilepsy variant.



Publications
Articles associated with genes and sequences of this homology group.

Phenotypic heterogeneity in consanguineous patients with a common CLN8 mutation.
Mahajnah M & Zelnik N. Pediatr Neurol 47, 303-5 (2012).



Conserved Domains
Conserved Domains from CDD found in protein sequences by rpsblast searching.



Related Homology Resources
Links to curated and computed homology information found in other databases.
Orthology group for M.musculus Cln8 includes H.sapiens CLN8 and R.norvegicus Cln8.



UniGene
Links to UniGene entries found by comparing the homologous proteins against the transcript database.

Chordata
Mammalia - mammals (11 transcripts, 9 species)
Actinopterygii - bony fishes (5 transcripts, 5 species)
Amphibia - amphibians (2 transcripts, 2 species)
Aves - birds (1 transcript, 1 species)

 

 

 

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