Display Settings:

Format

Send to:

Choose Destination

Links from Gene

HomoloGene:6114. Gene conserved in Bilateria Download , Links
Genes
Genes identified as putative homologs of one another during the construction of HomoloGene.

Proteins
Proteins used in sequence comparisons and their conserved domain architectures.

LSM12,  H.sapiens
LSM12 homolog (S. cerevisiae)
NP_689557.1
195 aa
LSM12,  P.troglodytes
LSM12 homolog (S. cerevisiae)
XP_523664.3
195 aa
LSM12,  M.mulatta
LSM12 homolog (S. cerevisiae)
XP_001114115.1
195 aa
LSM12,  C.lupus
LSM12 homolog (S. cerevisiae)
XP_537623.2
195 aa
LSM12,  B.taurus
LSM12 homolog (S. cerevisiae)
NP_001069566.2
195 aa
Lsm12,  M.musculus
LSM12 homolog (S. cerevisiae)
NP_766535.1
195 aa
Lsm12,  R.norvegicus
LSM12 homolog (S. cerevisiae)
NP_001099313.1
195 aa
TMEM101,  G.gallus
transmembrane protein 101
NP_001131123.1
194 aa
lsm12b,  D.rerio
LSM12 homolog b (S. cerevisiae)
NP_998313.1
196 aa
lsm12a,  D.rerio
LSM12 homolog a (S. cerevisiae)
NP_999982.1
196 aa
CG15735,  D.melanogaster
CG15735
NP_572777.2
217 aa
AgaP_AGAP002167,  A.gambiae
AgaP_AGAP002167
XP_308021.4
188 aa


Protein Alignments
Protein multiple alignment, pairwise similarity scores and evolutionary distances.

Show Multiple Alignment

Show Pairwise Alignment Scores

Pairwise alignments generated using BLAST
Regenerate Alignments




Publications
Articles associated with genes and sequences of this homology group.

SH3RF2 functions as an oncogene by mediating PAK4 protein stability.
Kim TW, et al. Carcinogenesis 35, 624-34 (2014).
Evolutionary dynamics of U12-type spliceosomal introns.
Lin CF, et al. BMC Evol Biol 10, 47 (2010).



Conserved Domains
Conserved Domains from CDD found in protein sequences by rpsblast searching.
AD (pfam09793)
  Anticodon-binding domain.
Sm_like (cl00259)
  Sm and related proteins.
AD (cl10767)
  Anticodon-binding domain.



Related Homology Resources
Links to curated and computed homology information found in other databases.
Orthology group for M.musculus Lsm12 includes H.sapiens LSM12 and R.norvegicus Lsm12.



UniGene
Links to UniGene entries found by comparing the homologous proteins against the transcript database.

Chordata
Actinopterygii - bony fishes (17 transcripts, 10 species)
Mammalia - mammals (14 transcripts, 11 species)
Aves - birds (3 transcripts, 3 species)
Amphibia - amphibians (3 transcripts, 2 species)
Ascidiacea - tunicates (2 transcripts, 2 species)
Cephalochordata - lancelets (1 transcript, 1 species)

Arthropoda
Insecta - insects (11 transcripts, 11 species)
Arachnida - arachnids (1 transcript, 1 species)
Branchiopoda - crustaceans (1 transcript, 1 species)
Maxillopoda - crustaceans (1 transcript, 1 species)

Mollusca
Gastropoda - gastropods (2 transcripts, 2 species)

Annelida
Polychaeta - segmented worms (1 transcript, 1 species)

Echinodermata
Echinoidea - sea urchins (1 transcript, 1 species)

 

 

 

Support Center