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HomoloGene:23324. Gene conserved in Euteleostomi Download , Links
Genes
Genes identified as putative homologs of one another during the construction of HomoloGene.

Proteins
Proteins used in sequence comparisons and their conserved domain architectures.

NR1D1,  H.sapiens
nuclear receptor subfamily 1, group D, member 1
NP_068370.1
614 aa
NR1D1,  P.troglodytes
nuclear receptor subfamily 1, group D, member 1
XP_511468.2
614 aa
NR1D1,  C.lupus
nuclear receptor subfamily 1, group D, member 1
XP_003435298.1
612 aa
NR1D1,  B.taurus
nuclear receptor subfamily 1, group D, member 1
NP_001071568.1
613 aa
Nr1d1,  M.musculus
nuclear receptor subfamily 1, group D, member 1
NP_663409.2
615 aa
Nr1d1,  R.norvegicus
nuclear receptor subfamily 1, group D, member 1
NP_001106893.1
615 aa
nr1d1,  X.tropicalis
nuclear receptor subfamily 1, group D, member 1
NP_001093675.1
522 aa
nr1d1,  D.rerio
nuclear receptor subfamily 1, group d, member 1
NP_991292.1
637 aa


Protein Alignments
Protein multiple alignment, pairwise similarity scores and evolutionary distances.

Show Multiple Alignment

Show Pairwise Alignment Scores

Pairwise alignments generated using BLAST
Regenerate Alignments




Publications
Articles associated with genes and sequences of this homology group.

The nuclear receptor Rev-erbα controls circadian thermogenic plasticity.
Gerhart-Hines Z, et al. Nature 503, 410-413 (2013).
Rev-erb-alpha: an integrator of circadian rhythms and metabolism.
Duez H & Staels B. J Appl Physiol (1985) 107, 1972-80 (2009).
Integration of microRNA miR-122 in hepatic circadian gene expression.
Gatfield D, et al. Genes Dev 23, 1313-26 (2009).



Conserved Domains
Conserved Domains from CDD found in protein sequences by rpsblast searching.
NR_LBD (cl11397)
  The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators.
NR_DBD_like (cl02596)
  DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers.
NR_LBD (cl11397)
  The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators.



Related Homology Resources
Links to curated and computed homology information found in other databases.
Orthology group for M.musculus Nr1d1 includes H.sapiens NR1D1 and R.norvegicus Nr1d1.



UniGene
Links to UniGene entries found by comparing the homologous proteins against the transcript database.

Chordata
Mammalia - mammals (16 transcripts, 11 species)
Actinopterygii - bony fishes (3 transcripts, 3 species)
Amphibia - amphibians (2 transcripts, 2 species)
Amniota - vertebrates (1 transcript, 1 species)

Annelida
Polychaeta - segmented worms (1 transcript, 1 species)

 

 

 

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