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Mouse Genome Issue MG-51

Summary:
GeneID: 71529 (Kazn (9030409G11Rik)), assembly gap
Description:
Kazn (9030409G11Rik; GeneID:71529, NM_144531.3) may extend into the assembly gap between AL844164.17 and AL611984.15.
Status:
Resolved (GRC Resolved by Electronic Means)
Type:
Gap
Last updated:
2017-10-12
Experiment type:
Clone Sequencing
Affects version:
MGSCv36
Fix version:
GRCm39, GRCm38.p6
Resolution:
Component MF597748.1 closes the assembly gap between components AL844164.17 and AL611984.15. It also provides complete representation of Kazn (GeneID: 71529).

Patches and alternate loci

Scaffold type:
FIX patch to GRCm38
Comment:
This sequence will be incorporated into the reference assembly in the next major assembly release. At that time, the accession number for this patch will be made secondary to the reference chromosome accession. "This scaffold uses MF597748.1 to replace WGS components CAAA01133583.1, CAAA01016195.1, and CAAA01016197.1, and provide a continuous path between GRCm38 NC_000070.6 components AL844164.17 and AL611984.15. This update also provides complete representation of Kazn (NM_144531.3 and NM_001109684.1)."
Revision history of patches and alts for MG-51
Assembly Scaffold type Contig name GenBank accession RefSeq accession Region
GRCm38 FIX MG51_PATCH KZ289069.1 region89
GRCm38.p6 FIX MG51_PATCH KZ289069.1 NW_019168508.1 region89

Locations and genomic context

Select a placement below to display it in the Sequence Viewer.
  • (View region: Ensembl | NCBI | UCSC)
  • (View region: Ensembl | NCBI | UCSC)