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Mouse Genome Issue MG-3700

Summary:
Ch. 18 Reference Assembly Gap
Description:
Reference assembly gap between accessions AC157649.4 and AC126553.4.
Status:
Resolved (GRC Resolved by Electronic Means)
Type:
Gap
Last updated:
2017-10-12
Affects version:
MGSCv37
Fix version:
GRCm39, GRCm38.p6
Resolution:
Component MF597737.1 has been added to close an assembly gap between AC157649.4 and AC126553.4 and to improve representation of Pstpip2 (GeneID: 19201).

Patches and alternate loci

Scaffold type:
FIX patch to GRCm38
Comment:
This sequence will be incorporated into the reference assembly in the next major assembly release. At that time, the accession number for this patch will be made secondary to the reference chromosome accession. This scaffold adds MF597737.1 to close an assembly gap between AC157649.4 and AC126553.4 in GRCm38 chromosome 18 (NC_000084.6) and to provide complete representation of Pstpip2 (NM_013831.4).
Revision history of patches and alts for MG-3700
Assembly Scaffold type Contig name GenBank accession RefSeq accession Region
GRCm38 FIX MG3700_PATCH KZ289091.1 Pstpip2
GRCm38.p6 FIX MG3700_PATCH KZ289091.1 NW_019168530.1 Pstpip2

Locations and genomic context

Select a placement below to display it in the Sequence Viewer.
  • (View region: Ensembl | NCBI | UCSC)
  • (View region: Ensembl | NCBI | UCSC)