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Mouse Genome Issue MG-3659

Summary:
Chr. X Gap Problem
Description:
There is a gap between BX813306.4 and CR589930.7
Status:
Resolved (GRC Resolved by Electronic Means)
Type:
Gap
Last updated:
2020-01-13
Experiment type:
Clone Sequencing
Affects version:
MGSCv37
Fix version:
GRCm39
Resolution:
Alignment of optical mapping data to the reference indicate no gap in the assembly in this region. The false gap between BX813306.4 (RP23-442E11) and CU915268.2 (WI1-97I11) was introduced due to haplotype incompatibility. In the updated path there is an overlap between BX813306.4 (RP23-442E11) and CR589930.7 (RP23-224F19) and CU915268.2 is removed.

Patches and alternate loci

No patches or alts are associated with MG-3659.

Locations and genomic context

Select a placement below to display it in the Sequence Viewer.