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Mouse Genome Issue MG-3656

Summary:
Chr. X Gap Problem
Description:
There is a gap between CR955033.1 and AL671962.5
Status:
Resolved (GRC Resolved by Electronic Means)
Type:
Gap
Last updated:
2017-10-12
Experiment type:
Clone Sequencing
Affects version:
MGSCv37
Fix version:
GRCm39, GRCm38.p6
Resolution:
Components FQ976862.4 and MF597733.1 have been added to close the gap in the assembly between components CU915277.2 and AL671962.5.

Patches and alternate loci

Scaffold type:
FIX patch to GRCm38
Comment:
This sequence will be incorporated into the reference assembly in the next major assembly release. At that time, the accession number for this patch will be made secondary to the reference chromosome accession. This scaffold adds components MF597733.1 and FQ976862.4 to the reference assembly to provide a continuous path between GRCm38 chromosome X (NC_000086.7) components CU915277.2 and AL671962.5. This update also improves representation of Dgkk (NM_177914.3).
Revision history of patches and alts for MG-3656
Assembly Scaffold type Contig name GenBank accession RefSeq accession Region
GRCm38 FIX MG3656_PATCH KZ289093.1 Dgkk
GRCm38.p6 FIX MG3656_PATCH KZ289093.1 NW_019168532.1 Dgkk

Locations and genomic context

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