Skip navigation and go to main content

Human Genome Region DOC2B_RPH3AL

Assembly:
GRCh37.p12
Location:
chr17:1-252,428
Cytogenetic location:

Loading ideogram...

Genome issues
Issue ID Status Description Resolution text
HG-1176 Resolved NOVEL patch GL383563.1 created to capture sequence from AC214012.3 not represented in reference chromosome Scaffold GL383563.1 was created to capture sequence from AC214012.3 not represented in reference chromosome. The update to GL383563.2 corrected 3 single nucleotide errors. The update to GL383563.3 extended the scaffold by adding 4 additional components that also contained sequence not present on the reference chromosome. These sequences are described in HG-1760, HG-1766, HG-1768 and HG-1769.
HG-1760 Resolved HTG sequence AC216025.3:19919-21582 is present in the 1kG ph1 decoy but absent from the Reference assembly AC216025.3 was added to the NOVEL patch scaffold GL383563 to capture this decoy sequence. See HG-1176 for more information.
HG-1766 Resolved HTG sequence AC207589.3 nt 26962-33466 and nt 12084-13773 are present in the 1kG ph1 decoy but absent from the GRCh37 Reference assembly AC207589.3 was added to the NOVEL patch scaffold GL383563 to capture this decoy sequence. See HG-1176 for more information.
HG-1768 Resolved HTG sequence AC243301.3:22291-23436 is present in the 1kG ph1 decoy but absent from the GRCh37 Reference assembly AC243301.3 was added to the NOVEL patch scaffold GL383563 to capture this decoy sequence. See HG-1176 for more information.
HG-1769 Resolved HTG sequence AC211856.4:17143-21855 is present in the 1kG ph1 decoy but absent from the GRCh37 Reference assembly AC211856.4 was added to the NOVEL patch scaffold GL383563 to capture this decoy sequence. See HG-1176 for more information.
HG-417 Resolved There is a possible functional difference between the proteins encoded by RefSeq NM_003585.2 (DOC2B) and the genomic region to which it aligns. AC240565.4 has been sequenced and submitted. This clone extends toward the telomere and provides representation for the end of RefSeq gene NM_003585.2 (DOC2B).
Patches and alternate loci
Show in Viewer GenBank ID RefSeq ID Scaffold type Length Alignment mismatch Unique sequence
GL383563.1 NW_003315952.1 NOVEL 270,261 257 17,956
JH806582.1 NW_004070872.1 FIX 342,635 0 90,207
           

DOC2B_RPH3AL -- chr17 (NC_000017.10):1-252,428