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Human Genome Issue HG-400

Summary:
GeneID: 85458 (DIXDC1), poor quality (includes component misassembly)
Description:
There is a possible functional difference between the proteins encoded by RefSeq NM_001037954.2 (DIXDC1) and the genomic region to which it aligns.
Status:
Resolved (GRC Resolved by Experimental Method)
Type:
Clone Problem
Last updated:
2015-07-23
Experiment type:
PCR
Affects version:
NCBI36
Fix version:
GRCh37.p6, GRCh37.p7, GRCh37.p12
Resolution:
PCR_RP11_AP000907_1 confirms the sequence of NM_001037954 and has been included in the TPF as a contained product.

Patches and alternate loci

Scaffold type:
FIX patch to GRCh37
Comment:
This patch contains FP884232.2, which has been used to correct a 1 nt insertion in NC_000011.9 component AP001781.5 that affects representation of ALG9 (NM_024740.2). This patch also contains FP884231.1 and FO082284.1, which have been used to correct two single nt indels in NC_000011.9 component AP000907.6 that affects representation of DIXDC1 (NM_001037954.2).
Revision history of patches and alts for HG-400
Assembly Scaffold type Contig name GenBank accession RefSeq accession Region
GRCh37.p6 FIX HG388_HG400_PATCH JH159142.1 NW_003871080.1 DIXDC1_ALG9
GRCh37.p7 FIX HG388_HG400_PATCH JH159142.2 NW_003871080.1 DIXDC1_ALG9

Locations and genomic context

Select a placement below to display it in the Sequence Viewer.
  • (View region: Ensembl | NCBI | UCSC)
  • (View region: Ensembl | NCBI | UCSC)