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Human Genome Issue HG-311

Summary:
GeneID: 5408 (PNLIPRP2), poor quality (includes component misassembly)
Description:
There is a possible functional difference between the proteins encoded by RefSeq NM_005396.4 (PNLIPRP2) and the genomic region to which it aligns.
Status:
Resolved (GRC Resolved by Experimental Method)
Type:
Clone Problem
Last updated:
2014-10-01
Experiment type:
PCR
Affects version:
NCBI36
Fix version:
GRCh37.p7, GRCh38
Resolution:
PCR performed and an error found in the reference component AC016825. The PCR has been submitted to EMBL/GenBank accession FO082044.1, this has been added to the TPF to correct the reference.

Patches and alternate loci

Scaffold type:
FIX patch to GRCh37
Comment:
This sequence will be incorporated into the reference assembly in the next major assembly release. At that time, the accession number for this patch will be made secondary to the reference chromosome accession. This patch contains FO082044.1, which has been used to correct a 1 nt deletion in NC_000010.10 component AC016825.12 that affects the representation of PNLIPRP2 (NM_005396.4).
Revision history of patches and alts for HG-311
Assembly Scaffold type Contig name GenBank accession RefSeq accession Region
GRCh37.p7 FIX HG311_PATCH JH591182.1 NW_003871069.1 PNLIPRP2

Locations and genomic context

Select a placement below to display it in the Sequence Viewer.
  • (View region: Ensembl | NCBI | UCSC)
  • (View region: Ensembl | NCBI | UCSC)