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Human Genome Issue HG-1437

Summary:
An RP11 clone pathway is being sequenced for an ampliconic region on Chromosome X between components AL359854.8 and AL158203.12 of GRCh37.
Description:
An RP11 clone pathway is being sequenced for an ampliconic region on Chromosome X between components AL359854.8 and AL158203.12 of GRCh37.
Status:
Resolved (GRC Resolved by Experimental Method)
Type:
Path Problem
Last updated:
2016-01-12
Affects version:
GRCh37
Fix version:
GRCh37.p10, GRCh38
Resolution:
This new TPF has been uploaded to the patches TPF and chromosome TPF. As a result of the updated TPF, parts of the assembly within this region now appear as inverted when compared against previous assemblies.

Patches and alternate loci

Scaffold type:
FIX patch to GRCh37
Comment:
This sequence will be incorporated into the reference assembly in the next major assembly release. At that time, the accession number for this patch will be made secondary to the reference chromosome accession. The purpose of this patch is to create a single haplotype of ampliconic sequence (RPCI-11) between components AL359854.8 and AL158203.12 of GRCh37 (NC_000023.10).
Revision history of patches and alts for HG-1437
Assembly Scaffold type Contig name GenBank accession RefSeq accession Region
GRCh37.p10 FIX HG1437_PATCH JH806591.1 NW_004070881.1 REGION88

Locations and genomic context

Select a placement below to display it in the Sequence Viewer.
  • (View region: Ensembl | NCBI | UCSC)
  • (View region: Ensembl | NCBI | UCSC)