Human Genome Assembly GRCh37.p13
Information on tiling path files (TPFs) for the assembly is available at TPF Overview.
Other assembly versions:
Chromosome lengths are calculated by summing the length of the placed scaffolds and estimated gaps.
| Chromosome | Total length (bp) | GenBank accession | RefSeq accession |
|---|---|---|---|
| 1 | 249,250,621 | CM000663.1 | NC_000001.10 |
| 2 | 243,199,373 | CM000664.1 | NC_000002.11 |
| 3 | 198,022,430 | CM000665.1 | NC_000003.11 |
| 4 | 191,154,276 | CM000666.1 | NC_000004.11 |
| 5 | 180,915,260 | CM000667.1 | NC_000005.9 |
| 6 | 171,115,067 | CM000668.1 | NC_000006.11 |
| 7 | 159,138,663 | CM000669.1 | NC_000007.13 |
| 8 | 146,364,022 | CM000670.1 | NC_000008.10 |
| 9 | 141,213,431 | CM000671.1 | NC_000009.11 |
| 10 | 135,534,747 | CM000672.1 | NC_000010.10 |
| 11 | 135,006,516 | CM000673.1 | NC_000011.9 |
| 12 | 133,851,895 | CM000674.1 | NC_000012.11 |
| 13 | 115,169,878 | CM000675.1 | NC_000013.10 |
| 14 | 107,349,540 | CM000676.1 | NC_000014.8 |
| 15 | 102,531,392 | CM000677.1 | NC_000015.9 |
| 16 | 90,354,753 | CM000678.1 | NC_000016.9 |
| 17 | 81,195,210 | CM000679.1 | NC_000017.10 |
| 18 | 78,077,248 | CM000680.1 | NC_000018.9 |
| 19 | 59,128,983 | CM000681.1 | NC_000019.9 |
| 20 | 63,025,520 | CM000682.1 | NC_000020.10 |
| 21 | 48,129,895 | CM000683.1 | NC_000021.8 |
| 22 | 51,304,566 | CM000684.1 | NC_000022.10 |
| X | 155,270,560 | CM000685.1 | NC_000023.10 |
| Y | 59,373,566 | CM000686.1 | NC_000024.9 |
Total lengths are calculated by summing the length of the sequenced bases and estimated gaps.
| Chromosome | All scaffolds | Placed scaffolds | Unplaced scaffolds |
|---|---|---|---|
| 1 | 249,904,550 | 249,250,621 | 653,929 |
| 2 | 243,199,373 | 243,199,373 | 0 |
| 3 | 198,022,430 | 198,022,430 | 0 |
| 4 | 191,535,534 | 191,154,276 | 381,258 |
| 5 | 180,915,260 | 180,915,260 | 0 |
| 6 | 171,115,067 | 171,115,067 | 0 |
| 7 | 159,321,559 | 159,138,663 | 182,896 |
| 8 | 146,440,111 | 146,364,022 | 76,089 |
| 9 | 141,696,573 | 141,213,431 | 483,142 |
| 10 | 135,534,747 | 135,534,747 | 0 |
| 11 | 135,046,619 | 135,006,516 | 40,103 |
| 12 | 133,851,895 | 133,851,895 | 0 |
| 13 | 115,169,878 | 115,169,878 | 0 |
| 14 | 107,349,540 | 107,349,540 | 0 |
| 15 | 102,531,392 | 102,531,392 | 0 |
| 16 | 90,354,753 | 90,354,753 | 0 |
| 17 | 81,529,607 | 81,195,210 | 334,397 |
| 18 | 78,081,510 | 78,077,248 | 4,262 |
| 19 | 59,380,841 | 59,128,983 | 251,858 |
| 20 | 63,025,520 | 63,025,520 | 0 |
| 21 | 48,157,577 | 48,129,895 | 27,682 |
| 22 | 51,304,566 | 51,304,566 | 0 |
| X | 155,270,560 | 155,270,560 | 0 |
| Y | 59,373,566 | 59,373,566 | 0 |
| Un | 3,675,142 | na | 3,675,142 |
| Genome | 3,101,788,170 | 3,095,677,412 | 6,110,758 |
| Region | Location | Sequence types | Scaffold length |
|---|---|---|---|
| 10Q11 | chr10:46224334-51886485 | FIX | 2,587,026 |
| 1P11 | chr1:120471050-121346350 | FIX | 1,676,126 |
| 1Q21 | chr1:143871003-150440213 | FIX | 7,283,150 |
| 1Q32 | chr1:206072708-206940869 | FIX | 758,378 |
| ABO | chr9:136049442-136369192 | FIX | 330,164 |
| AKR1CL1 | chr10:5012527-5450243 | FIX | 437,946 |
| APOBEC | chr22:39280299-39407165 | NOVEL | 96,924 |
| ATRNL1 | chr10:116786296-117806873 | FIX | 1,020,827 |
| B3GNT6 | chr11:76709408-76900812 | FIX | 191,402 |
| BAHCC1 | chr17:79319163-79498447 | FIX | 186,059 |
| CALCA | chr11:14873971-15041407 | FIX | 167,437 |
| CBWD3 | chr9:70835469-71130847 | FIX | 295,379 |
| CD207 | chr2:70660851-71260429 | FIX | 599,580 |
| CD24 | chr6:107143253-107495574 | FIX | 478,993 |
| CEACAM_REGION_1 | chr19:41936867-42514711 | FIX | 579,598 |
| CLTCL1 | chr22:19134297-19346604 | FIX | 212,298 |
| COPG2 | chr7:129984424-130721755 | FIX | 716,227 |
| CWC15_SRSF8 | chr11:94611846-94852618 | FIX | 240,775 |
| CYP2D6 | chr22:42473660-42648568 | NOVEL | 236,824 |
| DCP1A | chr3:53185062-53448933 | FIX | 263,861 |
| DGKK_REGION98 | chrX:47619971-54424077 | FIX | 6,529,152 |
| DIXDC1_ALG9 | chr11:111618733-111945380 | FIX | 326,647 |
| DLGAP4 | chr20:34883261-34994224 | FIX | 70,483 |
| DNAH12 | chr3:57369478-57399969 | FIX | 78,793 |
| DOC2B_RPH3AL | chr17:1-252428 | FIX, NOVEL | 612,896 |
| EMG1 | chr12:6907581-7178849 | FIX | 273,128 |
| EPPK1_SPATC1 | chr8:144743526-145146062 | FIX | 429,806 |
| FAM101B | chr17:252429-296626 | FIX | 45,551 |
| FAM23A_MRC1 | chr10:17613209-18252930 | FIX | 392,792 |
| GALNT9 | chr12:132806993-132967794 | FIX | 165,247 |
| IGH | chr14:105803171-107268434 | FIX | 1,523,386 |
| INTS4L2 | chr7:65012083-65286677 | FIX | 274,521 |
| JRK | chr8:143711229-143813536 | FIX | 102,251 |
| KDM2B | chr12:121761801-122096824 | FIX | 334,922 |
| KRTAP_REGION_1 | chr17:39006985-39589187 | NOVEL | 569,697 |
| KRTAP_REGION_2 | chr21:45916561-46223846 | FIX | 307,252 |
| LAMA4 | chr6:112323682-112586593 | FIX | 262,912 |
| LPHN3 | chr4:62777687-62877254 | NOVEL | 121,345 |
| LRC | chr19:54528888-55595686 | FIX, NOVEL | 8,784,713 |
| MAMDC2 | chr9:72639029-72804234 | NOVEL | 171,286 |
| MAPT | chr17:43384864-44913631 | ALT, FIX | 2,135,213 |
| MCTP1 | chr5:94505561-94590195 | NOVEL | 101,241 |
| MEGF11 | chr15:66200521-66577156 | NOVEL | 388,773 |
| MHC | chr6:28477797-33448354 | ALT, FIX | 33,285,464 |
| MMP12 | chr11:102702497-102822936 | FIX | 120,441 |
| MMP28 | chr17:34034852-34246252 | FIX | 211,416 |
| MTX1 | chr1:155180173-155275036 | NOVEL | 110,268 |
| MYO19 | chr17:34442621-35005379 | FIX | 534,288 |
| NCAM1 | chr11:112687997-113234431 | FIX | 546,435 |
| OLFACTORY_REGION_1 | chr11:55956728-56641043 | NOVEL | 392,407 |
| PCDHB | chr5:140144410-140687716 | FIX | 543,325 |
| PECAM1 | chr17:62273514-62649312 | FIX | 457,041 |
| PHF16 | chrX:46609875-47079810 | FIX | 469,972 |
| PNLIPRP2 | chr10:118348517-118544777 | FIX | 196,262 |
| PPIP5K2 | chr5:102420838-102687150 | FIX | 266,316 |
| PPP2R2D | chr10:133727528-133781577 | FIX | 93,149 |
| REGION1 | chr1:248865779-249098883 | FIX | 98,668 |
| REGION10 | chr6:80059725-80156628 | NOVEL | 124,736 |
| REGION100 | chr9:92286339-92528796 | FIX | 155,926 |
| REGION101 | chr20:53978607-54220677 | FIX | 283,551 |
| REGION102 | chr8:48176435-48405006 | FIX | 228,602 |
| REGION103 | chr17:22174115-22263006 | FIX | 341,712 |
| REGION11 | chr7:141333209-141446383 | NOVEL | 119,183 |
| REGION12 | chr9:139136890-139252828 | FIX | 111,716 |
| REGION13 | chr9:72028659-72092013 | NOVEL | 71,551 |
| REGION14 | chr9:7428994-7577169 | NOVEL | 162,988 |
| REGION15 | chr9:90793962-90842895 | NOVEL | 60,032 |
| REGION16 | chr10:27574584-27706537 | NOVEL | 179,254 |
| REGION17 | chr10:133258319-133381404 | FIX | 128,378 |
| REGION18 | chr10:45670681-45964419 | NOVEL | 309,802 |
| REGION19 | chr11:25191953-25340626 | NOVEL | 154,407 |
| REGION2 | chr1:153673007-153838214 | NOVEL | 182,439 |
| REGION20 | chr12:126711744-126890020 | NOVEL | 184,319 |
| REGION21 | chr12:28148967-28263711 | NOVEL | 120,804 |
| REGION22 | chr12:58326520-58486538 | NOVEL | 169,178 |
| REGION23 | chr12:59323046-59454651 | NOVEL | 138,655 |
| REGION24 | chr12:101505377-101652073 | NOVEL | 152,874 |
| REGION25 | chr15:28557187-28842093 | NOVEL | 296,527 |
| REGION26 | chr16:55822434-56002460 | NOVEL | 192,462 |
| REGION27 | chr17:21250948-21566608 | FIX | 644,425 |
| REGION28 | chr17:68302419-68520360 | NOVEL | 223,995 |
| REGION3 | chr1:198339213-198694304 | NOVEL | 366,579 |
| REGION30 | chr17:75216812-75295408 | NOVEL | 90,219 |
| REGION31 | chr18:47818564-48101162 | NOVEL | 289,831 |
| REGION32 | chr18:49189306-49348012 | NOVEL | 164,789 |
| REGION33 | chr18:65090960-65219788 | NOVEL | 198,278 |
| REGION34 | chr18:70600357-70692016 | NOVEL | 104,552 |
| REGION35 | chr18:76253467-76412030 | NOVEL | 167,950 |
| REGION36 | chr18:76694886-76848997 | NOVEL | 159,547 |
| REGION37 | chr19:21831092-21991834 | NOVEL | 170,222 |
| REGION38 | chr19:34643165-34791855 | NOVEL | 155,864 |
| REGION39 | chr19:22303652-22483468 | NOVEL | 188,024 |
| REGION4 | chr2:36453102-36590458 | NOVEL | 143,390 |
| REGION40 | chr20:17751747-17874115 | NOVEL | 128,385 |
| REGION41 | chr21:15796462-15847792 | NOVEL | 63,917 |
| REGION42 | chr21:23474793-23669288 | NOVEL | 201,198 |
| REGION43 | chr21:34141390-34210247 | NOVEL | 74,652 |
| REGION44 | chr2:149790583-149880633 | NOVEL | 96,131 |
| REGION45 | chr4:75382210-75689879 | FIX | 248,177 |
| REGION46 | chr7:57342227-57586048 | FIX | 251,823 |
| REGION47 | chr7:98260131-98556215 | FIX | 327,774 |
| REGION48 | chr7:56835596-57190579 | FIX | 354,970 |
| REGION49 | chr11:49862648-50121284 | FIX | 321,004 |
| REGION5 | chr3:151307154-151477286 | NOVEL | 180,671 |
| REGION50 | chr12:60001-282464 | FIX, NOVEL | 330,611 |
| REGION51 | chr13:115085142-115109878 | FIX | 34,662 |
| REGION52 | chr19:20193557-20845946 | FIX | 580,393 |
| REGION53 | chr20:61031539-61267733 | FIX | 179,899 |
| REGION54 | chr2:243059660-243189373 | FIX | 66,021 |
| REGION55 | chr2:95326172-95618108 | FIX | 389,939 |
| REGION56 | chr4:190828226-191044276 | FIX | 297,485 |
| REGION57 | chr10:60001-224405 | FIX | 168,465 |
| REGION58 | chr12:10953894-11330216 | NOVEL | 780,880 |
| REGION59 | chrX:803878-1227822 | FIX | 284,527 |
| REGION6 | chr4:34519577-34885480 | NOVEL | 376,187 |
| REGION60 | chr1:31872759-32017063 | FIX | 151,551 |
| REGION61 | chr5:29036605-29254576 | NOVEL | 226,852 |
| REGION62 | chr8:1965390-2498608 | FIX | 608,579 |
| REGION63 | chr11:69614786-69922571 | FIX | 276,448 |
| REGION64 | chr3:60558332-60952039 | FIX | 393,769 |
| REGION65 | chr17:65936106-66324470 | FIX | 388,340 |
| REGION66 | chr19:8634915-8926179 | FIX | 245,473 |
| REGION67 | chrX:151734490-154906585 | FIX | 3,110,903 |
| REGION69 | chr17:77412077-77766016 | FIX | 376,223 |
| REGION7 | chr4:156756530-156908416 | NOVEL | 164,536 |
| REGION73 | chr3:11856742-12027971 | NOVEL | 173,151 |
| REGION74 | chr16:57774022-57871358 | FIX | 97,345 |
| REGION75 | chrX:36202464-37669766 | FIX | 1,421,298 |
| REGION76 | chrX:75200416-77450502 | FIX | 2,213,455 |
| REGION77 | chr1:3823584-3845268 | FIX | 22,982 |
| REGION78 | chr1:205916833-205922707 | FIX | 24,680 |
| REGION79 | chr1:235167042-235192211 | FIX | 47,409 |
| REGION8 | chr5:161800673-161968654 | NOVEL | 173,459 |
| REGION80 | chr6:26585843-26826779 | FIX | 273,386 |
| REGION81 | chr9:132892850-133073060 | FIX | 211,307 |
| REGION82 | chr9:137025633-137247659 | FIX | 191,831 |
| REGION83 | chr22:16050001-16087693 | FIX | 70,876 |
| REGION84 | chr22:16656462-16697850 | FIX | 167,183 |
| REGION85 | chr22:16847851-16884805 | FIX | 73,505 |
| REGION86 | chr22:51203354-51244566 | FIX | 43,543 |
| REGION87 | chrX:45534581-45805400 | FIX | 270,630 |
| REGION88 | chrX:62203738-63086230 | FIX | 882,083 |
| REGION89 | chrX:71530834-72366730 | FIX | 835,911 |
| REGION9 | chr5:12681538-12744122 | NOVEL | 82,728 |
| REGION90 | chrX:100573313-100962928 | FIX | 389,631 |
| REGION91 | chrX:101383115-101773566 | FIX | 390,496 |
| REGION92 | chrX:103118514-103552339 | FIX | 444,074 |
| REGION93 | chrX:112661943-115918761 | FIX | 3,148,462 |
| REGION94 | chrX:119081534-119495352 | FIX | 413,927 |
| REGION95 | chrX:134202887-135196638 | FIX | 1,045,622 |
| REGION96 | chrX:139986363-140891303 | FIX | 899,320 |
| REGION97 | chrX:142299066-150174083 | FIX | 7,744,335 |
| REGION99 | chr6:169194170-169351741 | NOVEL | 187,824 |
| SCXB | chr8:145285645-145659901 | FIX | 203,777 |
| SEMA3B | chr3:50267585-50368277 | FIX | 100,694 |
| SH2B2 | chr7:101718951-102072447 | FIX | 356,330 |
| SHANK2 | chr11:70301893-71088948 | FIX | 872,115 |
| SLC25A26 | chr3:66270271-66308065 | FIX | 65,063 |
| SLC37A4 | chr11:118849111-118957986 | FIX | 108,875 |
| SLC46A1 | chr17:26645159-26840019 | FIX | 194,862 |
| SMA | chr5:68512646-70910270 | NOVEL | 1,612,928 |
| SNTB2 | chr16:69174054-69258593 | NOVEL | 89,672 |
| SOCS7 | chr17:36372617-36711255 | FIX | 338,640 |
| SPC25 | chr2:169686873-169793704 | NOVEL | 123,821 |
| SPON1 | chr11:13963464-14425744 | FIX | 462,282 |
| SYNM | chr15:99529037-99696045 | FIX | 170,033 |
| TEX13A | chrX:104423968-104489003 | FIX | 65,034 |
| TMEM242 | chr6:157539699-157789039 | FIX | 149,443 |
| TMEM50B | chr21:34777735-34884866 | NOVEL | 116,690 |
| TRB | chr7:141557850-142778624 | FIX | 1,284,284 |
| TREH | chr11:118245278-118653701 | FIX | 408,430 |
| TTC25 | chr17:39869611-40277911 | FIX | 412,535 |
| UGT2B17 | chr4:69170077-69878175 | ALT | 590,426 |
| VPRBP | chr3:51416109-51584055 | FIX | 171,362 |
| WILLIAMS | chr7:71935722-75921852 | FIX | 3,821,770 |
| ZNF518A | chr10:97861451-98039369 | FIX | 177,920 |
| ZNF595_ZNF718 | chr4:10001-507004 | FIX | 503,215 |
| ZNF66 | chr19:20845947-21225187 | NOVEL | 385,657 |
N50 is a measure of contiguity. 50% of the bases reside in a scaffold of this length or greater.
| Chromosome | All scaffolds | Placed scaffolds | Unplaced scaffolds |
|---|---|---|---|
| 1 | 57,411,349 | 57,411,349 | 547,496 |
| 2 | 68,452,323 | 68,452,323 | 0 |
| 3 | 100,537,107 | 100,537,107 | 0 |
| 4 | 115,591,997 | 115,591,997 | 191,469 |
| 5 | 46,395,641 | 46,395,641 | 0 |
| 6 | 58,720,166 | 58,720,166 | 0 |
| 7 | 50,360,631 | 50,360,631 | 182,896 |
| 8 | 38,440,852 | 38,440,852 | 38,914 |
| 9 | 62,237,592 | 62,237,592 | 169,874 |
| 10 | 79,420,533 | 79,420,533 | 0 |
| 11 | 41,593,379 | 41,593,379 | 40,103 |
| 12 | 71,516,776 | 71,516,776 | 0 |
| 13 | 67,740,324 | 67,740,324 | 0 |
| 14 | 88,289,540 | 88,289,540 | 0 |
| 15 | 53,620,202 | 53,620,202 | 0 |
| 16 | 42,003,582 | 42,003,582 | 0 |
| 17 | 44,983,201 | 44,983,201 | 174,588 |
| 18 | 25,808,112 | 25,808,112 | 4,262 |
| 19 | 31,387,201 | 31,387,201 | 159,169 |
| 20 | 31,409,461 | 31,409,461 | 0 |
| 21 | 28,617,430 | 28,617,430 | 27,682 |
| 22 | 29,755,346 | 29,755,346 | 0 |
| X | 27,775,034 | 27,775,034 | 0 |
| Y | 6,265,435 | 6,265,435 | 0 |
| Un | 164,239 | na | 164,239 |
| Genome | 46,395,641 | 46,395,641 | 172,149 |
| Region | Location | Sequence types | Scaffold length |
|---|---|---|---|
| 10Q11 | chr10:46224334-51886485 | FIX | 2,281,126 |
| 1P11 | chr1:120471050-121346350 | FIX | 1,676,126 |
| 1Q21 | chr1:143871003-150440213 | FIX | 7,283,150 |
| 1Q32 | chr1:206072708-206940869 | FIX | 758,378 |
| ABO | chr9:136049442-136369192 | FIX | 330,164 |
| AKR1CL1 | chr10:5012527-5450243 | FIX | 437,946 |
| APOBEC | chr22:39280299-39407165 | NOVEL | 96,924 |
| ATRNL1 | chr10:116786296-117806873 | FIX | 1,020,827 |
| B3GNT6 | chr11:76709408-76900812 | FIX | 191,402 |
| BAHCC1 | chr17:79319163-79498447 | FIX | 186,059 |
| CALCA | chr11:14873971-15041407 | FIX | 167,437 |
| CBWD3 | chr9:70835469-71130847 | FIX | 295,379 |
| CD207 | chr2:70660851-71260429 | FIX | 599,580 |
| CD24 | chr6:107143253-107495574 | FIX | 478,993 |
| CEACAM_REGION_1 | chr19:41936867-42514711 | FIX | 579,598 |
| CLTCL1 | chr22:19134297-19346604 | FIX | 212,298 |
| COPG2 | chr7:129984424-130721755 | FIX | 716,227 |
| CWC15_SRSF8 | chr11:94611846-94852618 | FIX | 240,775 |
| CYP2D6 | chr22:42473660-42648568 | NOVEL | 162,811 |
| DCP1A | chr3:53185062-53448933 | FIX | 263,861 |
| DGKK_REGION98 | chrX:47619971-54424077 | FIX | 4,110,759 |
| DIXDC1_ALG9 | chr11:111618733-111945380 | FIX | 326,647 |
| DLGAP4 | chr20:34883261-34994224 | FIX | 70,483 |
| DNAH12 | chr3:57369478-57399969 | FIX | 78,793 |
| DOC2B_RPH3AL | chr17:1-252428 | FIX, NOVEL | 342,635 |
| EMG1 | chr12:6907581-7178849 | FIX | 273,128 |
| EPPK1_SPATC1 | chr8:144743526-145146062 | FIX | 429,806 |
| FAM101B | chr17:252429-296626 | FIX | 45,551 |
| FAM23A_MRC1 | chr10:17613209-18252930 | FIX | 392,792 |
| GALNT9 | chr12:132806993-132967794 | FIX | 165,247 |
| IGH | chr14:105803171-107268434 | FIX | 1,523,386 |
| INTS4L2 | chr7:65012083-65286677 | FIX | 274,521 |
| JRK | chr8:143711229-143813536 | FIX | 102,251 |
| KDM2B | chr12:121761801-122096824 | FIX | 334,922 |
| KRTAP_REGION_1 | chr17:39006985-39589187 | NOVEL | 133,151 |
| KRTAP_REGION_2 | chr21:45916561-46223846 | FIX | 307,252 |
| LAMA4 | chr6:112323682-112586593 | FIX | 262,912 |
| LPHN3 | chr4:62777687-62877254 | NOVEL | 121,345 |
| LRC | chr19:54528888-55595686 | FIX, NOVEL | 1,002,682 |
| MAMDC2 | chr9:72639029-72804234 | NOVEL | 171,286 |
| MAPT | chr17:43384864-44913631 | ALT, FIX | 1,680,828 |
| MCTP1 | chr5:94505561-94590195 | NOVEL | 101,241 |
| MEGF11 | chr15:66200521-66577156 | NOVEL | 388,773 |
| MHC | chr6:28477797-33448354 | ALT, FIX | 4,683,263 |
| MMP12 | chr11:102702497-102822936 | FIX | 120,441 |
| MMP28 | chr17:34034852-34246252 | FIX | 211,416 |
| MTX1 | chr1:155180173-155275036 | NOVEL | 110,268 |
| MYO19 | chr17:34442621-35005379 | FIX | 534,288 |
| NCAM1 | chr11:112687997-113234431 | FIX | 546,435 |
| OLFACTORY_REGION_1 | chr11:55956728-56641043 | NOVEL | 200,998 |
| PCDHB | chr5:140144410-140687716 | FIX | 543,325 |
| PECAM1 | chr17:62273514-62649312 | FIX | 457,041 |
| PHF16 | chrX:46609875-47079810 | FIX | 469,972 |
| PNLIPRP2 | chr10:118348517-118544777 | FIX | 196,262 |
| PPIP5K2 | chr5:102420838-102687150 | FIX | 266,316 |
| PPP2R2D | chr10:133727528-133781577 | FIX | 93,149 |
| REGION1 | chr1:248865779-249098883 | FIX | 49,352 |
| REGION10 | chr6:80059725-80156628 | NOVEL | 124,736 |
| REGION100 | chr9:92286339-92528796 | FIX | 155,926 |
| REGION101 | chr20:53978607-54220677 | FIX | 283,551 |
| REGION102 | chr8:48176435-48405006 | FIX | 228,602 |
| REGION103 | chr17:22174115-22263006 | FIX | 341,712 |
| REGION11 | chr7:141333209-141446383 | NOVEL | 119,183 |
| REGION12 | chr9:139136890-139252828 | FIX | 62,435 |
| REGION13 | chr9:72028659-72092013 | NOVEL | 71,551 |
| REGION14 | chr9:7428994-7577169 | NOVEL | 162,988 |
| REGION15 | chr9:90793962-90842895 | NOVEL | 60,032 |
| REGION16 | chr10:27574584-27706537 | NOVEL | 179,254 |
| REGION17 | chr10:133258319-133381404 | FIX | 128,378 |
| REGION18 | chr10:45670681-45964419 | NOVEL | 309,802 |
| REGION19 | chr11:25191953-25340626 | NOVEL | 154,407 |
| REGION2 | chr1:153673007-153838214 | NOVEL | 182,439 |
| REGION20 | chr12:126711744-126890020 | NOVEL | 184,319 |
| REGION21 | chr12:28148967-28263711 | NOVEL | 120,804 |
| REGION22 | chr12:58326520-58486538 | NOVEL | 169,178 |
| REGION23 | chr12:59323046-59454651 | NOVEL | 138,655 |
| REGION24 | chr12:101505377-101652073 | NOVEL | 152,874 |
| REGION25 | chr15:28557187-28842093 | NOVEL | 296,527 |
| REGION26 | chr16:55822434-56002460 | NOVEL | 192,462 |
| REGION27 | chr17:21250948-21566608 | FIX | 644,425 |
| REGION28 | chr17:68302419-68520360 | NOVEL | 223,995 |
| REGION3 | chr1:198339213-198694304 | NOVEL | 366,579 |
| REGION30 | chr17:75216812-75295408 | NOVEL | 90,219 |
| REGION31 | chr18:47818564-48101162 | NOVEL | 289,831 |
| REGION32 | chr18:49189306-49348012 | NOVEL | 164,789 |
| REGION33 | chr18:65090960-65219788 | NOVEL | 198,278 |
| REGION34 | chr18:70600357-70692016 | NOVEL | 104,552 |
| REGION35 | chr18:76253467-76412030 | NOVEL | 167,950 |
| REGION36 | chr18:76694886-76848997 | NOVEL | 159,547 |
| REGION37 | chr19:21831092-21991834 | NOVEL | 170,222 |
| REGION38 | chr19:34643165-34791855 | NOVEL | 155,864 |
| REGION39 | chr19:22303652-22483468 | NOVEL | 188,024 |
| REGION4 | chr2:36453102-36590458 | NOVEL | 143,390 |
| REGION40 | chr20:17751747-17874115 | NOVEL | 128,385 |
| REGION41 | chr21:15796462-15847792 | NOVEL | 63,917 |
| REGION42 | chr21:23474793-23669288 | NOVEL | 201,198 |
| REGION43 | chr21:34141390-34210247 | NOVEL | 74,652 |
| REGION44 | chr2:149790583-149880633 | NOVEL | 96,131 |
| REGION45 | chr4:75382210-75689879 | FIX | 248,177 |
| REGION46 | chr7:57342227-57586048 | FIX | 251,823 |
| REGION47 | chr7:98260131-98556215 | FIX | 327,774 |
| REGION48 | chr7:56835596-57190579 | FIX | 354,970 |
| REGION49 | chr11:49862648-50121284 | FIX | 321,004 |
| REGION5 | chr3:151307154-151477286 | NOVEL | 180,671 |
| REGION50 | chr12:60001-282464 | FIX, NOVEL | 167,313 |
| REGION51 | chr13:115085142-115109878 | FIX | 34,662 |
| REGION52 | chr19:20193557-20845946 | FIX | 580,393 |
| REGION53 | chr20:61031539-61267733 | FIX | 179,899 |
| REGION54 | chr2:243059660-243189373 | FIX | 66,021 |
| REGION55 | chr2:95326172-95618108 | FIX | 389,939 |
| REGION56 | chr4:190828226-191044276 | FIX | 297,485 |
| REGION57 | chr10:60001-224405 | FIX | 168,465 |
| REGION58 | chr12:10953894-11330216 | NOVEL | 408,271 |
| REGION59 | chrX:803878-1227822 | FIX | 284,527 |
| REGION6 | chr4:34519577-34885480 | NOVEL | 376,187 |
| REGION60 | chr1:31872759-32017063 | FIX | 151,551 |
| REGION61 | chr5:29036605-29254576 | NOVEL | 226,852 |
| REGION62 | chr8:1965390-2498608 | FIX | 608,579 |
| REGION63 | chr11:69614786-69922571 | FIX | 276,448 |
| REGION64 | chr3:60558332-60952039 | FIX | 393,769 |
| REGION65 | chr17:65936106-66324470 | FIX | 388,340 |
| REGION66 | chr19:8634915-8926179 | FIX | 245,473 |
| REGION67 | chrX:151734490-154906585 | FIX | 3,110,903 |
| REGION69 | chr17:77412077-77766016 | FIX | 376,223 |
| REGION7 | chr4:156756530-156908416 | NOVEL | 164,536 |
| REGION73 | chr3:11856742-12027971 | NOVEL | 173,151 |
| REGION74 | chr16:57774022-57871358 | FIX | 97,345 |
| REGION75 | chrX:36202464-37669766 | FIX | 898,979 |
| REGION76 | chrX:75200416-77450502 | FIX | 1,461,188 |
| REGION77 | chr1:3823584-3845268 | FIX | 22,982 |
| REGION78 | chr1:205916833-205922707 | FIX | 24,680 |
| REGION79 | chr1:235167042-235192211 | FIX | 47,409 |
| REGION8 | chr5:161800673-161968654 | NOVEL | 173,459 |
| REGION80 | chr6:26585843-26826779 | FIX | 273,386 |
| REGION81 | chr9:132892850-133073060 | FIX | 211,307 |
| REGION82 | chr9:137025633-137247659 | FIX | 169,437 |
| REGION83 | chr22:16050001-16087693 | FIX | 70,876 |
| REGION84 | chr22:16656462-16697850 | FIX | 167,183 |
| REGION85 | chr22:16847851-16884805 | FIX | 73,505 |
| REGION86 | chr22:51203354-51244566 | FIX | 43,543 |
| REGION87 | chrX:45534581-45805400 | FIX | 270,630 |
| REGION88 | chrX:62203738-63086230 | FIX | 882,083 |
| REGION89 | chrX:71530834-72366730 | FIX | 835,911 |
| REGION9 | chr5:12681538-12744122 | NOVEL | 82,728 |
| REGION90 | chrX:100573313-100962928 | FIX | 389,631 |
| REGION91 | chrX:101383115-101773566 | FIX | 390,496 |
| REGION92 | chrX:103118514-103552339 | FIX | 444,074 |
| REGION93 | chrX:112661943-115918761 | FIX | 862,483 |
| REGION94 | chrX:119081534-119495352 | FIX | 413,927 |
| REGION95 | chrX:134202887-135196638 | FIX | 1,045,622 |
| REGION96 | chrX:139986363-140891303 | FIX | 899,320 |
| REGION97 | chrX:142299066-150174083 | FIX | 6,530,008 |
| REGION99 | chr6:169194170-169351741 | NOVEL | 187,824 |
| SCXB | chr8:145285645-145659901 | FIX | 203,777 |
| SEMA3B | chr3:50267585-50368277 | FIX | 100,694 |
| SH2B2 | chr7:101718951-102072447 | FIX | 356,330 |
| SHANK2 | chr11:70301893-71088948 | FIX | 872,115 |
| SLC25A26 | chr3:66270271-66308065 | FIX | 65,063 |
| SLC37A4 | chr11:118849111-118957986 | FIX | 108,875 |
| SLC46A1 | chr17:26645159-26840019 | FIX | 194,862 |
| SMA | chr5:68512646-70910270 | NOVEL | 1,612,928 |
| SNTB2 | chr16:69174054-69258593 | NOVEL | 89,672 |
| SOCS7 | chr17:36372617-36711255 | FIX | 338,640 |
| SPC25 | chr2:169686873-169793704 | NOVEL | 123,821 |
| SPON1 | chr11:13963464-14425744 | FIX | 462,282 |
| SYNM | chr15:99529037-99696045 | FIX | 170,033 |
| TEX13A | chrX:104423968-104489003 | FIX | 65,034 |
| TMEM242 | chr6:157539699-157789039 | FIX | 149,443 |
| TMEM50B | chr21:34777735-34884866 | NOVEL | 116,690 |
| TRB | chr7:141557850-142778624 | FIX | 1,284,284 |
| TREH | chr11:118245278-118653701 | FIX | 408,430 |
| TTC25 | chr17:39869611-40277911 | FIX | 412,535 |
| UGT2B17 | chr4:69170077-69878175 | ALT | 590,426 |
| VPRBP | chr3:51416109-51584055 | FIX | 171,362 |
| WILLIAMS | chr7:71935722-75921852 | FIX | 3,821,770 |
| ZNF518A | chr10:97861451-98039369 | FIX | 177,920 |
| ZNF595_ZNF718 | chr4:10001-507004 | FIX | 503,215 |
| ZNF66 | chr19:20845947-21225187 | NOVEL | 385,657 |
Ungapped lengths are calculated by summing the length of sequenced bases only. 'Ns' are excluded.
| Chromosome | All scaffolds | Placed scaffolds | Unplaced scaffolds |
|---|---|---|---|
| 1 | 225,934,550 | 225,280,621 | 653,929 |
| 2 | 238,204,522 | 238,204,522 | 0 |
| 3 | 194,797,140 | 194,797,140 | 0 |
| 4 | 188,042,934 | 187,661,676 | 381,258 |
| 5 | 177,695,260 | 177,695,260 | 0 |
| 6 | 167,395,067 | 167,395,067 | 0 |
| 7 | 155,536,559 | 155,353,663 | 182,896 |
| 8 | 142,964,911 | 142,888,922 | 75,989 |
| 9 | 120,626,573 | 120,143,431 | 483,142 |
| 10 | 131,314,747 | 131,314,747 | 0 |
| 11 | 131,169,619 | 131,129,516 | 40,103 |
| 12 | 130,481,395 | 130,481,395 | 0 |
| 13 | 95,589,878 | 95,589,878 | 0 |
| 14 | 88,289,540 | 88,289,540 | 0 |
| 15 | 81,694,769 | 81,694,769 | 0 |
| 16 | 78,884,753 | 78,884,753 | 0 |
| 17 | 78,129,607 | 77,795,210 | 334,397 |
| 18 | 74,661,510 | 74,657,248 | 4,262 |
| 19 | 56,060,841 | 55,808,983 | 251,858 |
| 20 | 59,505,520 | 59,505,520 | 0 |
| 21 | 35,134,224 | 35,106,642 | 27,582 |
| 22 | 34,894,566 | 34,894,566 | 0 |
| X | 151,100,560 | 151,100,560 | 0 |
| Y | 25,653,566 | 25,653,566 | 0 |
| Un | 3,675,142 | na | 3,675,142 |
| Genome | 2,867,437,753 | 2,861,327,195 | 6,110,558 |
| Region | Location | Sequence types | Scaffold length |
|---|---|---|---|
| 10Q11 | chr10:46224334-51886485 | FIX | 2,537,026 |
| 1P11 | chr1:120471050-121346350 | FIX | 1,676,126 |
| 1Q21 | chr1:143871003-150440213 | FIX | 7,283,150 |
| 1Q32 | chr1:206072708-206940869 | FIX | 758,378 |
| ABO | chr9:136049442-136369192 | FIX | 330,164 |
| AKR1CL1 | chr10:5012527-5450243 | FIX | 437,946 |
| APOBEC | chr22:39280299-39407165 | NOVEL | 96,924 |
| ATRNL1 | chr10:116786296-117806873 | FIX | 1,020,827 |
| B3GNT6 | chr11:76709408-76900812 | FIX | 191,402 |
| BAHCC1 | chr17:79319163-79498447 | FIX | 186,059 |
| CALCA | chr11:14873971-15041407 | FIX | 167,437 |
| CBWD3 | chr9:70835469-71130847 | FIX | 295,379 |
| CD207 | chr2:70660851-71260429 | FIX | 599,580 |
| CD24 | chr6:107143253-107495574 | FIX | 478,993 |
| CEACAM_REGION_1 | chr19:41936867-42514711 | FIX | 579,598 |
| CLTCL1 | chr22:19134297-19346604 | FIX | 212,298 |
| COPG2 | chr7:129984424-130721755 | FIX | 666,227 |
| CWC15_SRSF8 | chr11:94611846-94852618 | FIX | 240,775 |
| CYP2D6 | chr22:42473660-42648568 | NOVEL | 236,824 |
| DCP1A | chr3:53185062-53448933 | FIX | 263,861 |
| DGKK_REGION98 | chrX:47619971-54424077 | FIX | 6,399,152 |
| DIXDC1_ALG9 | chr11:111618733-111945380 | FIX | 326,647 |
| DLGAP4 | chr20:34883261-34994224 | FIX | 70,483 |
| DNAH12 | chr3:57369478-57399969 | FIX | 78,793 |
| DOC2B_RPH3AL | chr17:1-252428 | FIX, NOVEL | 612,896 |
| EMG1 | chr12:6907581-7178849 | FIX | 273,128 |
| EPPK1_SPATC1 | chr8:144743526-145146062 | FIX | 429,806 |
| FAM101B | chr17:252429-296626 | FIX | 45,551 |
| FAM23A_MRC1 | chr10:17613209-18252930 | FIX | 392,792 |
| GALNT9 | chr12:132806993-132967794 | FIX | 165,247 |
| IGH | chr14:105803171-107268434 | FIX | 1,523,386 |
| INTS4L2 | chr7:65012083-65286677 | FIX | 274,521 |
| JRK | chr8:143711229-143813536 | FIX | 102,251 |
| KDM2B | chr12:121761801-122096824 | FIX | 334,922 |
| KRTAP_REGION_1 | chr17:39006985-39589187 | NOVEL | 569,697 |
| KRTAP_REGION_2 | chr21:45916561-46223846 | FIX | 307,252 |
| LAMA4 | chr6:112323682-112586593 | FIX | 262,912 |
| LPHN3 | chr4:62777687-62877254 | NOVEL | 121,345 |
| LRC | chr19:54528888-55595686 | FIX, NOVEL | 6,041,713 |
| MAMDC2 | chr9:72639029-72804234 | NOVEL | 171,286 |
| MAPT | chr17:43384864-44913631 | ALT, FIX | 1,985,213 |
| MCTP1 | chr5:94505561-94590195 | NOVEL | 101,241 |
| MEGF11 | chr15:66200521-66577156 | NOVEL | 388,773 |
| MHC | chr6:28477797-33448354 | ALT, FIX | 27,885,143 |
| MMP12 | chr11:102702497-102822936 | FIX | 120,441 |
| MMP28 | chr17:34034852-34246252 | FIX | 211,416 |
| MTX1 | chr1:155180173-155275036 | NOVEL | 110,268 |
| MYO19 | chr17:34442621-35005379 | FIX | 534,288 |
| NCAM1 | chr11:112687997-113234431 | FIX | 546,435 |
| OLFACTORY_REGION_1 | chr11:55956728-56641043 | NOVEL | 392,407 |
| PCDHB | chr5:140144410-140687716 | FIX | 543,325 |
| PECAM1 | chr17:62273514-62649312 | FIX | 457,041 |
| PHF16 | chrX:46609875-47079810 | FIX | 469,972 |
| PNLIPRP2 | chr10:118348517-118544777 | FIX | 196,262 |
| PPIP5K2 | chr5:102420838-102687150 | FIX | 266,316 |
| PPP2R2D | chr10:133727528-133781577 | FIX | 93,149 |
| REGION1 | chr1:248865779-249098883 | FIX | 98,668 |
| REGION10 | chr6:80059725-80156628 | NOVEL | 124,736 |
| REGION100 | chr9:92286339-92528796 | FIX | 155,926 |
| REGION101 | chr20:53978607-54220677 | FIX | 283,551 |
| REGION102 | chr8:48176435-48405006 | FIX | 228,602 |
| REGION103 | chr17:22174115-22263006 | FIX | 338,271 |
| REGION11 | chr7:141333209-141446383 | NOVEL | 119,183 |
| REGION12 | chr9:139136890-139252828 | FIX | 111,716 |
| REGION13 | chr9:72028659-72092013 | NOVEL | 71,551 |
| REGION14 | chr9:7428994-7577169 | NOVEL | 162,988 |
| REGION15 | chr9:90793962-90842895 | NOVEL | 60,032 |
| REGION16 | chr10:27574584-27706537 | NOVEL | 179,254 |
| REGION17 | chr10:133258319-133381404 | FIX | 128,378 |
| REGION18 | chr10:45670681-45964419 | NOVEL | 309,802 |
| REGION19 | chr11:25191953-25340626 | NOVEL | 154,407 |
| REGION2 | chr1:153673007-153838214 | NOVEL | 182,439 |
| REGION20 | chr12:126711744-126890020 | NOVEL | 184,319 |
| REGION21 | chr12:28148967-28263711 | NOVEL | 120,804 |
| REGION22 | chr12:58326520-58486538 | NOVEL | 169,178 |
| REGION23 | chr12:59323046-59454651 | NOVEL | 138,655 |
| REGION24 | chr12:101505377-101652073 | NOVEL | 152,874 |
| REGION25 | chr15:28557187-28842093 | NOVEL | 296,527 |
| REGION26 | chr16:55822434-56002460 | NOVEL | 192,462 |
| REGION27 | chr17:21250948-21566608 | FIX | 625,479 |
| REGION28 | chr17:68302419-68520360 | NOVEL | 223,995 |
| REGION3 | chr1:198339213-198694304 | NOVEL | 366,579 |
| REGION30 | chr17:75216812-75295408 | NOVEL | 90,219 |
| REGION31 | chr18:47818564-48101162 | NOVEL | 289,831 |
| REGION32 | chr18:49189306-49348012 | NOVEL | 164,789 |
| REGION33 | chr18:65090960-65219788 | NOVEL | 148,278 |
| REGION34 | chr18:70600357-70692016 | NOVEL | 104,552 |
| REGION35 | chr18:76253467-76412030 | NOVEL | 167,950 |
| REGION36 | chr18:76694886-76848997 | NOVEL | 159,547 |
| REGION37 | chr19:21831092-21991834 | NOVEL | 170,222 |
| REGION38 | chr19:34643165-34791855 | NOVEL | 155,864 |
| REGION39 | chr19:22303652-22483468 | NOVEL | 188,024 |
| REGION4 | chr2:36453102-36590458 | NOVEL | 143,390 |
| REGION40 | chr20:17751747-17874115 | NOVEL | 128,385 |
| REGION41 | chr21:15796462-15847792 | NOVEL | 63,917 |
| REGION42 | chr21:23474793-23669288 | NOVEL | 201,198 |
| REGION43 | chr21:34141390-34210247 | NOVEL | 74,652 |
| REGION44 | chr2:149790583-149880633 | NOVEL | 96,131 |
| REGION45 | chr4:75382210-75689879 | FIX | 248,177 |
| REGION46 | chr7:57342227-57586048 | FIX | 251,823 |
| REGION47 | chr7:98260131-98556215 | FIX | 327,774 |
| REGION48 | chr7:56835596-57190579 | FIX | 354,970 |
| REGION49 | chr11:49862648-50121284 | FIX | 321,004 |
| REGION5 | chr3:151307154-151477286 | NOVEL | 180,671 |
| REGION50 | chr12:60001-282464 | FIX, NOVEL | 330,611 |
| REGION51 | chr13:115085142-115109878 | FIX | 34,662 |
| REGION52 | chr19:20193557-20845946 | FIX | 580,393 |
| REGION53 | chr20:61031539-61267733 | FIX | 179,899 |
| REGION54 | chr2:243059660-243189373 | FIX | 66,021 |
| REGION55 | chr2:95326172-95618108 | FIX | 389,939 |
| REGION56 | chr4:190828226-191044276 | FIX | 247,485 |
| REGION57 | chr10:60001-224405 | FIX | 168,465 |
| REGION58 | chr12:10953894-11330216 | NOVEL | 780,880 |
| REGION59 | chrX:803878-1227822 | FIX | 284,527 |
| REGION6 | chr4:34519577-34885480 | NOVEL | 376,187 |
| REGION60 | chr1:31872759-32017063 | FIX | 151,551 |
| REGION61 | chr5:29036605-29254576 | NOVEL | 226,852 |
| REGION62 | chr8:1965390-2498608 | FIX | 608,579 |
| REGION63 | chr11:69614786-69922571 | FIX | 276,448 |
| REGION64 | chr3:60558332-60952039 | FIX | 393,769 |
| REGION65 | chr17:65936106-66324470 | FIX | 388,340 |
| REGION66 | chr19:8634915-8926179 | FIX | 245,473 |
| REGION67 | chrX:151734490-154906585 | FIX | 3,110,903 |
| REGION69 | chr17:77412077-77766016 | FIX | 376,223 |
| REGION7 | chr4:156756530-156908416 | NOVEL | 164,536 |
| REGION73 | chr3:11856742-12027971 | NOVEL | 173,151 |
| REGION74 | chr16:57774022-57871358 | FIX | 97,345 |
| REGION75 | chrX:36202464-37669766 | FIX | 1,421,298 |
| REGION76 | chrX:75200416-77450502 | FIX | 2,213,455 |
| REGION77 | chr1:3823584-3845268 | FIX | 22,982 |
| REGION78 | chr1:205916833-205922707 | FIX | 24,680 |
| REGION79 | chr1:235167042-235192211 | FIX | 47,409 |
| REGION8 | chr5:161800673-161968654 | NOVEL | 173,459 |
| REGION80 | chr6:26585843-26826779 | FIX | 273,386 |
| REGION81 | chr9:132892850-133073060 | FIX | 211,307 |
| REGION82 | chr9:137025633-137247659 | FIX | 191,831 |
| REGION83 | chr22:16050001-16087693 | FIX | 70,876 |
| REGION84 | chr22:16656462-16697850 | FIX | 167,183 |
| REGION85 | chr22:16847851-16884805 | FIX | 73,505 |
| REGION86 | chr22:51203354-51244566 | FIX | 43,543 |
| REGION87 | chrX:45534581-45805400 | FIX | 270,630 |
| REGION88 | chrX:62203738-63086230 | FIX | 882,083 |
| REGION89 | chrX:71530834-72366730 | FIX | 835,911 |
| REGION9 | chr5:12681538-12744122 | NOVEL | 82,728 |
| REGION90 | chrX:100573313-100962928 | FIX | 389,631 |
| REGION91 | chrX:101383115-101773566 | FIX | 390,496 |
| REGION92 | chrX:103118514-103552339 | FIX | 444,074 |
| REGION93 | chrX:112661943-115918761 | FIX | 3,148,462 |
| REGION94 | chrX:119081534-119495352 | FIX | 413,927 |
| REGION95 | chrX:134202887-135196638 | FIX | 1,045,622 |
| REGION96 | chrX:139986363-140891303 | FIX | 899,320 |
| REGION97 | chrX:142299066-150174083 | FIX | 7,744,335 |
| REGION99 | chr6:169194170-169351741 | NOVEL | 187,824 |
| SCXB | chr8:145285645-145659901 | FIX | 203,777 |
| SEMA3B | chr3:50267585-50368277 | FIX | 100,694 |
| SH2B2 | chr7:101718951-102072447 | FIX | 356,330 |
| SHANK2 | chr11:70301893-71088948 | FIX | 822,115 |
| SLC25A26 | chr3:66270271-66308065 | FIX | 65,063 |
| SLC37A4 | chr11:118849111-118957986 | FIX | 108,875 |
| SLC46A1 | chr17:26645159-26840019 | FIX | 194,862 |
| SMA | chr5:68512646-70910270 | NOVEL | 1,512,928 |
| SNTB2 | chr16:69174054-69258593 | NOVEL | 89,672 |
| SOCS7 | chr17:36372617-36711255 | FIX | 338,640 |
| SPC25 | chr2:169686873-169793704 | NOVEL | 123,821 |
| SPON1 | chr11:13963464-14425744 | FIX | 462,282 |
| SYNM | chr15:99529037-99696045 | FIX | 170,033 |
| TEX13A | chrX:104423968-104489003 | FIX | 65,034 |
| TMEM242 | chr6:157539699-157789039 | FIX | 149,443 |
| TMEM50B | chr21:34777735-34884866 | NOVEL | 116,690 |
| TRB | chr7:141557850-142778624 | FIX | 1,284,284 |
| TREH | chr11:118245278-118653701 | FIX | 408,430 |
| TTC25 | chr17:39869611-40277911 | FIX | 412,535 |
| UGT2B17 | chr4:69170077-69878175 | ALT | 590,426 |
| VPRBP | chr3:51416109-51584055 | FIX | 171,362 |
| WILLIAMS | chr7:71935722-75921852 | FIX | 3,821,770 |
| ZNF518A | chr10:97861451-98039369 | FIX | 177,920 |
| ZNF595_ZNF718 | chr4:10001-507004 | FIX | 503,215 |
| ZNF66 | chr19:20845947-21225187 | NOVEL | 385,657 |
Spanned gaps are found within scaffolds and there is some evidence suggesting linkage
between the two sequences flanking the gap. Unspanned gaps are found between scaffolds and
there is no evidence of linkage.
| Spanned gaps | Unspanned gaps | |||||
|---|---|---|---|---|---|---|
| Chromosome | All scaffolds | Placed scaffolds | Unplaced scaffolds | All scaffolds | Placed scaffolds | Unplaced scaffolds |
| 1 | 19 | 19 | 0 | 22 | 22 | 0 |
| 2 | 6 | 6 | 0 | 15 | 15 | 0 |
| 3 | 0 | 0 | 0 | 7 | 7 | 0 |
| 4 | 1 | 1 | 0 | 12 | 12 | 0 |
| 5 | 1 | 1 | 0 | 6 | 6 | 0 |
| 6 | 6 | 6 | 0 | 8 | 8 | 0 |
| 7 | 9 | 9 | 0 | 8 | 8 | 0 |
| 8 | 2 | 1 | 1 | 9 | 9 | 0 |
| 9 | 15 | 15 | 0 | 29 | 29 | 0 |
| 10 | 8 | 8 | 0 | 12 | 12 | 0 |
| 11 | 4 | 4 | 0 | 11 | 11 | 0 |
| 12 | 4 | 4 | 0 | 8 | 8 | 0 |
| 13 | 0 | 0 | 0 | 10 | 10 | 0 |
| 14 | 0 | 0 | 0 | 5 | 5 | 0 |
| 15 | 2 | 2 | 0 | 10 | 10 | 0 |
| 16 | 1 | 1 | 0 | 10 | 10 | 0 |
| 17 | 2 | 2 | 0 | 5 | 5 | 0 |
| 18 | 2 | 2 | 0 | 7 | 7 | 0 |
| 19 | 1 | 1 | 0 | 8 | 8 | 0 |
| 20 | 2 | 2 | 0 | 9 | 9 | 0 |
| 21 | 9 | 8 | 1 | 14 | 14 | 0 |
| 22 | 0 | 0 | 0 | 9 | 9 | 0 |
| X | 5 | 5 | 0 | 21 | 21 | 0 |
| Y | 2 | 2 | 0 | 16 | 16 | 0 |
| Un | 0 | na | 0 | 0 | na | 0 |
| Genome | 101 | 99 | 2 | 271 | 271 | 0 |
| Region | Location | Sequence types | Scaffolds | Spanned gaps | Unspanned gaps |
|---|---|---|---|---|---|
| 10Q11 | chr10:46224334-51886485 | FIX | 2 | 1 | 0 |
| 1P11 | chr1:120471050-121346350 | FIX | 1 | 0 | 0 |
| 1Q21 | chr1:143871003-150440213 | FIX | 1 | 0 | 0 |
| 1Q32 | chr1:206072708-206940869 | FIX | 1 | 0 | 0 |
| ABO | chr9:136049442-136369192 | FIX | 1 | 0 | 0 |
| AKR1CL1 | chr10:5012527-5450243 | FIX | 1 | 0 | 0 |
| APOBEC | chr22:39280299-39407165 | NOVEL | 1 | 0 | 0 |
| ATRNL1 | chr10:116786296-117806873 | FIX | 1 | 0 | 0 |
| B3GNT6 | chr11:76709408-76900812 | FIX | 1 | 0 | 0 |
| BAHCC1 | chr17:79319163-79498447 | FIX | 1 | 0 | 0 |
| CALCA | chr11:14873971-15041407 | FIX | 1 | 0 | 0 |
| CBWD3 | chr9:70835469-71130847 | FIX | 1 | 0 | 0 |
| CD207 | chr2:70660851-71260429 | FIX | 1 | 0 | 0 |
| CD24 | chr6:107143253-107495574 | FIX | 1 | 0 | 0 |
| CEACAM_REGION_1 | chr19:41936867-42514711 | FIX | 1 | 0 | 0 |
| CLTCL1 | chr22:19134297-19346604 | FIX | 1 | 0 | 0 |
| COPG2 | chr7:129984424-130721755 | FIX | 1 | 1 | 0 |
| CWC15_SRSF8 | chr11:94611846-94852618 | FIX | 1 | 0 | 0 |
| CYP2D6 | chr22:42473660-42648568 | NOVEL | 2 | 0 | 0 |
| DCP1A | chr3:53185062-53448933 | FIX | 1 | 0 | 0 |
| DGKK_REGION98 | chrX:47619971-54424077 | FIX | 2 | 1 | 0 |
| DIXDC1_ALG9 | chr11:111618733-111945380 | FIX | 1 | 0 | 0 |
| DLGAP4 | chr20:34883261-34994224 | FIX | 1 | 0 | 0 |
| DNAH12 | chr3:57369478-57399969 | FIX | 1 | 0 | 0 |
| DOC2B_RPH3AL | chr17:1-252428 | FIX, NOVEL | 2 | 0 | 0 |
| EMG1 | chr12:6907581-7178849 | FIX | 1 | 0 | 0 |
| EPPK1_SPATC1 | chr8:144743526-145146062 | FIX | 1 | 0 | 0 |
| FAM101B | chr17:252429-296626 | FIX | 1 | 0 | 0 |
| FAM23A_MRC1 | chr10:17613209-18252930 | FIX | 1 | 0 | 0 |
| GALNT9 | chr12:132806993-132967794 | FIX | 1 | 0 | 0 |
| IGH | chr14:105803171-107268434 | FIX | 1 | 0 | 0 |
| INTS4L2 | chr7:65012083-65286677 | FIX | 1 | 0 | 0 |
| JRK | chr8:143711229-143813536 | FIX | 1 | 0 | 0 |
| KDM2B | chr12:121761801-122096824 | FIX | 1 | 0 | 0 |
| KRTAP_REGION_1 | chr17:39006985-39589187 | NOVEL | 4 | 0 | 0 |
| KRTAP_REGION_2 | chr21:45916561-46223846 | FIX | 1 | 0 | 0 |
| LAMA4 | chr6:112323682-112586593 | FIX | 1 | 0 | 0 |
| LPHN3 | chr4:62777687-62877254 | NOVEL | 1 | 0 | 0 |
| LRC | chr19:54528888-55595686 | FIX, NOVEL | 9 | 17 | 0 |
| MAMDC2 | chr9:72639029-72804234 | NOVEL | 1 | 0 | 0 |
| MAPT | chr17:43384864-44913631 | ALT, FIX | 2 | 3 | 0 |
| MCTP1 | chr5:94505561-94590195 | NOVEL | 1 | 0 | 0 |
| MEGF11 | chr15:66200521-66577156 | NOVEL | 1 | 0 | 0 |
| MHC | chr6:28477797-33448354 | ALT, FIX | 8 | 98 | 0 |
| MMP12 | chr11:102702497-102822936 | FIX | 1 | 0 | 0 |
| MMP28 | chr17:34034852-34246252 | FIX | 1 | 0 | 0 |
| MTX1 | chr1:155180173-155275036 | NOVEL | 1 | 0 | 0 |
| MYO19 | chr17:34442621-35005379 | FIX | 1 | 0 | 0 |
| NCAM1 | chr11:112687997-113234431 | FIX | 1 | 0 | 0 |
| OLFACTORY_REGION_1 | chr11:55956728-56641043 | NOVEL | 2 | 0 | 0 |
| PCDHB | chr5:140144410-140687716 | FIX | 1 | 0 | 0 |
| PECAM1 | chr17:62273514-62649312 | FIX | 1 | 0 | 0 |
| PHF16 | chrX:46609875-47079810 | FIX | 1 | 0 | 0 |
| PNLIPRP2 | chr10:118348517-118544777 | FIX | 1 | 0 | 0 |
| PPIP5K2 | chr5:102420838-102687150 | FIX | 1 | 0 | 0 |
| PPP2R2D | chr10:133727528-133781577 | FIX | 1 | 0 | 0 |
| REGION1 | chr1:248865779-249098883 | FIX | 2 | 0 | 0 |
| REGION10 | chr6:80059725-80156628 | NOVEL | 1 | 0 | 0 |
| REGION100 | chr9:92286339-92528796 | FIX | 1 | 0 | 0 |
| REGION101 | chr20:53978607-54220677 | FIX | 1 | 0 | 0 |
| REGION102 | chr8:48176435-48405006 | FIX | 1 | 0 | 0 |
| REGION103 | chr17:22174115-22263006 | FIX | 1 | 10 | 0 |
| REGION11 | chr7:141333209-141446383 | NOVEL | 1 | 0 | 0 |
| REGION12 | chr9:139136890-139252828 | FIX | 2 | 0 | 0 |
| REGION13 | chr9:72028659-72092013 | NOVEL | 1 | 0 | 0 |
| REGION14 | chr9:7428994-7577169 | NOVEL | 1 | 0 | 0 |
| REGION15 | chr9:90793962-90842895 | NOVEL | 1 | 0 | 0 |
| REGION16 | chr10:27574584-27706537 | NOVEL | 1 | 0 | 0 |
| REGION17 | chr10:133258319-133381404 | FIX | 1 | 0 | 0 |
| REGION18 | chr10:45670681-45964419 | NOVEL | 1 | 0 | 0 |
| REGION19 | chr11:25191953-25340626 | NOVEL | 1 | 0 | 0 |
| REGION2 | chr1:153673007-153838214 | NOVEL | 1 | 0 | 0 |
| REGION20 | chr12:126711744-126890020 | NOVEL | 1 | 0 | 0 |
| REGION21 | chr12:28148967-28263711 | NOVEL | 1 | 0 | 0 |
| REGION22 | chr12:58326520-58486538 | NOVEL | 1 | 0 | 0 |
| REGION23 | chr12:59323046-59454651 | NOVEL | 1 | 0 | 0 |
| REGION24 | chr12:101505377-101652073 | NOVEL | 1 | 0 | 0 |
| REGION25 | chr15:28557187-28842093 | NOVEL | 1 | 0 | 0 |
| REGION26 | chr16:55822434-56002460 | NOVEL | 1 | 0 | 0 |
| REGION27 | chr17:21250948-21566608 | FIX | 1 | 5 | 0 |
| REGION28 | chr17:68302419-68520360 | NOVEL | 1 | 0 | 0 |
| REGION3 | chr1:198339213-198694304 | NOVEL | 1 | 0 | 0 |
| REGION30 | chr17:75216812-75295408 | NOVEL | 1 | 0 | 0 |
| REGION31 | chr18:47818564-48101162 | NOVEL | 1 | 0 | 0 |
| REGION32 | chr18:49189306-49348012 | NOVEL | 1 | 0 | 0 |
| REGION33 | chr18:65090960-65219788 | NOVEL | 1 | 1 | 0 |
| REGION34 | chr18:70600357-70692016 | NOVEL | 1 | 0 | 0 |
| REGION35 | chr18:76253467-76412030 | NOVEL | 1 | 0 | 0 |
| REGION36 | chr18:76694886-76848997 | NOVEL | 1 | 0 | 0 |
| REGION37 | chr19:21831092-21991834 | NOVEL | 1 | 0 | 0 |
| REGION38 | chr19:34643165-34791855 | NOVEL | 1 | 0 | 0 |
| REGION39 | chr19:22303652-22483468 | NOVEL | 1 | 0 | 0 |
| REGION4 | chr2:36453102-36590458 | NOVEL | 1 | 0 | 0 |
| REGION40 | chr20:17751747-17874115 | NOVEL | 1 | 0 | 0 |
| REGION41 | chr21:15796462-15847792 | NOVEL | 1 | 0 | 0 |
| REGION42 | chr21:23474793-23669288 | NOVEL | 1 | 0 | 0 |
| REGION43 | chr21:34141390-34210247 | NOVEL | 1 | 0 | 0 |
| REGION44 | chr2:149790583-149880633 | NOVEL | 1 | 0 | 0 |
| REGION45 | chr4:75382210-75689879 | FIX | 1 | 0 | 0 |
| REGION46 | chr7:57342227-57586048 | FIX | 1 | 0 | 0 |
| REGION47 | chr7:98260131-98556215 | FIX | 1 | 0 | 0 |
| REGION48 | chr7:56835596-57190579 | FIX | 1 | 0 | 0 |
| REGION49 | chr11:49862648-50121284 | FIX | 1 | 0 | 0 |
| REGION5 | chr3:151307154-151477286 | NOVEL | 1 | 0 | 0 |
| REGION50 | chr12:60001-282464 | FIX, NOVEL | 2 | 0 | 0 |
| REGION51 | chr13:115085142-115109878 | FIX | 1 | 0 | 0 |
| REGION52 | chr19:20193557-20845946 | FIX | 1 | 0 | 0 |
| REGION53 | chr20:61031539-61267733 | FIX | 1 | 0 | 0 |
| REGION54 | chr2:243059660-243189373 | FIX | 1 | 0 | 0 |
| REGION55 | chr2:95326172-95618108 | FIX | 1 | 0 | 0 |
| REGION56 | chr4:190828226-191044276 | FIX | 1 | 1 | 0 |
| REGION57 | chr10:60001-224405 | FIX | 1 | 0 | 0 |
| REGION58 | chr12:10953894-11330216 | NOVEL | 2 | 0 | 0 |
| REGION59 | chrX:803878-1227822 | FIX | 1 | 0 | 0 |
| REGION6 | chr4:34519577-34885480 | NOVEL | 1 | 0 | 0 |
| REGION60 | chr1:31872759-32017063 | FIX | 1 | 0 | 0 |
| REGION61 | chr5:29036605-29254576 | NOVEL | 1 | 0 | 0 |
| REGION62 | chr8:1965390-2498608 | FIX | 1 | 0 | 0 |
| REGION63 | chr11:69614786-69922571 | FIX | 1 | 0 | 0 |
| REGION64 | chr3:60558332-60952039 | FIX | 1 | 0 | 0 |
| REGION65 | chr17:65936106-66324470 | FIX | 1 | 0 | 0 |
| REGION66 | chr19:8634915-8926179 | FIX | 1 | 0 | 0 |
| REGION67 | chrX:151734490-154906585 | FIX | 1 | 0 | 0 |
| REGION69 | chr17:77412077-77766016 | FIX | 1 | 0 | 0 |
| REGION7 | chr4:156756530-156908416 | NOVEL | 1 | 0 | 0 |
| REGION73 | chr3:11856742-12027971 | NOVEL | 1 | 0 | 0 |
| REGION74 | chr16:57774022-57871358 | FIX | 1 | 0 | 0 |
| REGION75 | chrX:36202464-37669766 | FIX | 2 | 0 | 0 |
| REGION76 | chrX:75200416-77450502 | FIX | 2 | 0 | 0 |
| REGION77 | chr1:3823584-3845268 | FIX | 1 | 0 | 0 |
| REGION78 | chr1:205916833-205922707 | FIX | 1 | 0 | 0 |
| REGION79 | chr1:235167042-235192211 | FIX | 1 | 0 | 0 |
| REGION8 | chr5:161800673-161968654 | NOVEL | 1 | 0 | 0 |
| REGION80 | chr6:26585843-26826779 | FIX | 1 | 0 | 0 |
| REGION81 | chr9:132892850-133073060 | FIX | 1 | 0 | 0 |
| REGION82 | chr9:137025633-137247659 | FIX | 2 | 0 | 0 |
| REGION83 | chr22:16050001-16087693 | FIX | 1 | 0 | 0 |
| REGION84 | chr22:16656462-16697850 | FIX | 1 | 0 | 0 |
| REGION85 | chr22:16847851-16884805 | FIX | 1 | 0 | 0 |
| REGION86 | chr22:51203354-51244566 | FIX | 1 | 0 | 0 |
| REGION87 | chrX:45534581-45805400 | FIX | 1 | 0 | 0 |
| REGION88 | chrX:62203738-63086230 | FIX | 1 | 0 | 0 |
| REGION89 | chrX:71530834-72366730 | FIX | 1 | 0 | 0 |
| REGION9 | chr5:12681538-12744122 | NOVEL | 1 | 0 | 0 |
| REGION90 | chrX:100573313-100962928 | FIX | 1 | 0 | 0 |
| REGION91 | chrX:101383115-101773566 | FIX | 1 | 0 | 0 |
| REGION92 | chrX:103118514-103552339 | FIX | 1 | 0 | 0 |
| REGION93 | chrX:112661943-115918761 | FIX | 4 | 0 | 0 |
| REGION94 | chrX:119081534-119495352 | FIX | 1 | 0 | 0 |
| REGION95 | chrX:134202887-135196638 | FIX | 1 | 0 | 0 |
| REGION96 | chrX:139986363-140891303 | FIX | 1 | 0 | 0 |
| REGION97 | chrX:142299066-150174083 | FIX | 2 | 0 | 0 |
| REGION99 | chr6:169194170-169351741 | NOVEL | 1 | 0 | 0 |
| SCXB | chr8:145285645-145659901 | FIX | 1 | 0 | 0 |
| SEMA3B | chr3:50267585-50368277 | FIX | 1 | 0 | 0 |
| SH2B2 | chr7:101718951-102072447 | FIX | 1 | 0 | 0 |
| SHANK2 | chr11:70301893-71088948 | FIX | 1 | 1 | 0 |
| SLC25A26 | chr3:66270271-66308065 | FIX | 1 | 0 | 0 |
| SLC37A4 | chr11:118849111-118957986 | FIX | 1 | 0 | 0 |
| SLC46A1 | chr17:26645159-26840019 | FIX | 1 | 0 | 0 |
| SMA | chr5:68512646-70910270 | NOVEL | 1 | 1 | 0 |
| SNTB2 | chr16:69174054-69258593 | NOVEL | 1 | 0 | 0 |
| SOCS7 | chr17:36372617-36711255 | FIX | 1 | 0 | 0 |
| SPC25 | chr2:169686873-169793704 | NOVEL | 1 | 0 | 0 |
| SPON1 | chr11:13963464-14425744 | FIX | 1 | 0 | 0 |
| SYNM | chr15:99529037-99696045 | FIX | 1 | 0 | 0 |
| TEX13A | chrX:104423968-104489003 | FIX | 1 | 0 | 0 |
| TMEM242 | chr6:157539699-157789039 | FIX | 1 | 0 | 0 |
| TMEM50B | chr21:34777735-34884866 | NOVEL | 1 | 0 | 0 |
| TRB | chr7:141557850-142778624 | FIX | 1 | 0 | 0 |
| TREH | chr11:118245278-118653701 | FIX | 1 | 0 | 0 |
| TTC25 | chr17:39869611-40277911 | FIX | 1 | 0 | 0 |
| UGT2B17 | chr4:69170077-69878175 | ALT | 1 | 0 | 0 |
| VPRBP | chr3:51416109-51584055 | FIX | 1 | 0 | 0 |
| WILLIAMS | chr7:71935722-75921852 | FIX | 1 | 0 | 0 |
| ZNF518A | chr10:97861451-98039369 | FIX | 1 | 0 | 0 |
| ZNF595_ZNF718 | chr4:10001-507004 | FIX | 1 | 0 | 0 |
| ZNF66 | chr19:20845947-21225187 | NOVEL | 1 | 0 | 0 |
Scaffold counts.
| Chromosome | All scaffolds | Placed scaffolds | Unplaced scaffolds |
|---|---|---|---|
| 1 | 21 | 19 | 2 |
| 2 | 13 | 13 | 0 |
| 3 | 4 | 4 | 0 |
| 4 | 12 | 10 | 2 |
| 5 | 5 | 5 | 0 |
| 6 | 3 | 3 | 0 |
| 7 | 8 | 7 | 1 |
| 8 | 9 | 7 | 2 |
| 9 | 28 | 24 | 4 |
| 10 | 8 | 8 | 0 |
| 11 | 5 | 4 | 1 |
| 12 | 6 | 6 | 0 |
| 13 | 5 | 5 | 0 |
| 14 | 1 | 1 | 0 |
| 15 | 7 | 7 | 0 |
| 16 | 4 | 4 | 0 |
| 17 | 10 | 6 | 4 |
| 18 | 4 | 3 | 1 |
| 19 | 6 | 4 | 2 |
| 20 | 4 | 4 | 0 |
| 21 | 9 | 8 | 1 |
| 22 | 4 | 4 | 0 |
| X | 17 | 17 | 0 |
| Y | 17 | 17 | 0 |
| Un | 39 | na | 39 |
| Genome | 249 | 190 | 59 |
| Region | Location | Sequence types | Scaffold length |
|---|---|---|---|
| 10Q11 | chr10:46224334-51886485 | FIX | 2 |
| 1P11 | chr1:120471050-121346350 | FIX | 1 |
| 1Q21 | chr1:143871003-150440213 | FIX | 1 |
| 1Q32 | chr1:206072708-206940869 | FIX | 1 |
| ABO | chr9:136049442-136369192 | FIX | 1 |
| AKR1CL1 | chr10:5012527-5450243 | FIX | 1 |
| APOBEC | chr22:39280299-39407165 | NOVEL | 1 |
| ATRNL1 | chr10:116786296-117806873 | FIX | 1 |
| B3GNT6 | chr11:76709408-76900812 | FIX | 1 |
| BAHCC1 | chr17:79319163-79498447 | FIX | 1 |
| CALCA | chr11:14873971-15041407 | FIX | 1 |
| CBWD3 | chr9:70835469-71130847 | FIX | 1 |
| CD207 | chr2:70660851-71260429 | FIX | 1 |
| CD24 | chr6:107143253-107495574 | FIX | 1 |
| CEACAM_REGION_1 | chr19:41936867-42514711 | FIX | 1 |
| CLTCL1 | chr22:19134297-19346604 | FIX | 1 |
| COPG2 | chr7:129984424-130721755 | FIX | 1 |
| CWC15_SRSF8 | chr11:94611846-94852618 | FIX | 1 |
| CYP2D6 | chr22:42473660-42648568 | NOVEL | 2 |
| DCP1A | chr3:53185062-53448933 | FIX | 1 |
| DGKK_REGION98 | chrX:47619971-54424077 | FIX | 2 |
| DIXDC1_ALG9 | chr11:111618733-111945380 | FIX | 1 |
| DLGAP4 | chr20:34883261-34994224 | FIX | 1 |
| DNAH12 | chr3:57369478-57399969 | FIX | 1 |
| DOC2B_RPH3AL | chr17:1-252428 | FIX, NOVEL | 2 |
| EMG1 | chr12:6907581-7178849 | FIX | 1 |
| EPPK1_SPATC1 | chr8:144743526-145146062 | FIX | 1 |
| FAM101B | chr17:252429-296626 | FIX | 1 |
| FAM23A_MRC1 | chr10:17613209-18252930 | FIX | 1 |
| GALNT9 | chr12:132806993-132967794 | FIX | 1 |
| IGH | chr14:105803171-107268434 | FIX | 1 |
| INTS4L2 | chr7:65012083-65286677 | FIX | 1 |
| JRK | chr8:143711229-143813536 | FIX | 1 |
| KDM2B | chr12:121761801-122096824 | FIX | 1 |
| KRTAP_REGION_1 | chr17:39006985-39589187 | NOVEL | 4 |
| KRTAP_REGION_2 | chr21:45916561-46223846 | FIX | 1 |
| LAMA4 | chr6:112323682-112586593 | FIX | 1 |
| LPHN3 | chr4:62777687-62877254 | NOVEL | 1 |
| LRC | chr19:54528888-55595686 | FIX, NOVEL | 9 |
| MAMDC2 | chr9:72639029-72804234 | NOVEL | 1 |
| MAPT | chr17:43384864-44913631 | ALT, FIX | 2 |
| MCTP1 | chr5:94505561-94590195 | NOVEL | 1 |
| MEGF11 | chr15:66200521-66577156 | NOVEL | 1 |
| MHC | chr6:28477797-33448354 | ALT, FIX | 8 |
| MMP12 | chr11:102702497-102822936 | FIX | 1 |
| MMP28 | chr17:34034852-34246252 | FIX | 1 |
| MTX1 | chr1:155180173-155275036 | NOVEL | 1 |
| MYO19 | chr17:34442621-35005379 | FIX | 1 |
| NCAM1 | chr11:112687997-113234431 | FIX | 1 |
| OLFACTORY_REGION_1 | chr11:55956728-56641043 | NOVEL | 2 |
| PCDHB | chr5:140144410-140687716 | FIX | 1 |
| PECAM1 | chr17:62273514-62649312 | FIX | 1 |
| PHF16 | chrX:46609875-47079810 | FIX | 1 |
| PNLIPRP2 | chr10:118348517-118544777 | FIX | 1 |
| PPIP5K2 | chr5:102420838-102687150 | FIX | 1 |
| PPP2R2D | chr10:133727528-133781577 | FIX | 1 |
| REGION1 | chr1:248865779-249098883 | FIX | 2 |
| REGION10 | chr6:80059725-80156628 | NOVEL | 1 |
| REGION100 | chr9:92286339-92528796 | FIX | 1 |
| REGION101 | chr20:53978607-54220677 | FIX | 1 |
| REGION102 | chr8:48176435-48405006 | FIX | 1 |
| REGION103 | chr17:22174115-22263006 | FIX | 1 |
| REGION11 | chr7:141333209-141446383 | NOVEL | 1 |
| REGION12 | chr9:139136890-139252828 | FIX | 2 |
| REGION13 | chr9:72028659-72092013 | NOVEL | 1 |
| REGION14 | chr9:7428994-7577169 | NOVEL | 1 |
| REGION15 | chr9:90793962-90842895 | NOVEL | 1 |
| REGION16 | chr10:27574584-27706537 | NOVEL | 1 |
| REGION17 | chr10:133258319-133381404 | FIX | 1 |
| REGION18 | chr10:45670681-45964419 | NOVEL | 1 |
| REGION19 | chr11:25191953-25340626 | NOVEL | 1 |
| REGION2 | chr1:153673007-153838214 | NOVEL | 1 |
| REGION20 | chr12:126711744-126890020 | NOVEL | 1 |
| REGION21 | chr12:28148967-28263711 | NOVEL | 1 |
| REGION22 | chr12:58326520-58486538 | NOVEL | 1 |
| REGION23 | chr12:59323046-59454651 | NOVEL | 1 |
| REGION24 | chr12:101505377-101652073 | NOVEL | 1 |
| REGION25 | chr15:28557187-28842093 | NOVEL | 1 |
| REGION26 | chr16:55822434-56002460 | NOVEL | 1 |
| REGION27 | chr17:21250948-21566608 | FIX | 1 |
| REGION28 | chr17:68302419-68520360 | NOVEL | 1 |
| REGION3 | chr1:198339213-198694304 | NOVEL | 1 |
| REGION30 | chr17:75216812-75295408 | NOVEL | 1 |
| REGION31 | chr18:47818564-48101162 | NOVEL | 1 |
| REGION32 | chr18:49189306-49348012 | NOVEL | 1 |
| REGION33 | chr18:65090960-65219788 | NOVEL | 1 |
| REGION34 | chr18:70600357-70692016 | NOVEL | 1 |
| REGION35 | chr18:76253467-76412030 | NOVEL | 1 |
| REGION36 | chr18:76694886-76848997 | NOVEL | 1 |
| REGION37 | chr19:21831092-21991834 | NOVEL | 1 |
| REGION38 | chr19:34643165-34791855 | NOVEL | 1 |
| REGION39 | chr19:22303652-22483468 | NOVEL | 1 |
| REGION4 | chr2:36453102-36590458 | NOVEL | 1 |
| REGION40 | chr20:17751747-17874115 | NOVEL | 1 |
| REGION41 | chr21:15796462-15847792 | NOVEL | 1 |
| REGION42 | chr21:23474793-23669288 | NOVEL | 1 |
| REGION43 | chr21:34141390-34210247 | NOVEL | 1 |
| REGION44 | chr2:149790583-149880633 | NOVEL | 1 |
| REGION45 | chr4:75382210-75689879 | FIX | 1 |
| REGION46 | chr7:57342227-57586048 | FIX | 1 |
| REGION47 | chr7:98260131-98556215 | FIX | 1 |
| REGION48 | chr7:56835596-57190579 | FIX | 1 |
| REGION49 | chr11:49862648-50121284 | FIX | 1 |
| REGION5 | chr3:151307154-151477286 | NOVEL | 1 |
| REGION50 | chr12:60001-282464 | FIX, NOVEL | 2 |
| REGION51 | chr13:115085142-115109878 | FIX | 1 |
| REGION52 | chr19:20193557-20845946 | FIX | 1 |
| REGION53 | chr20:61031539-61267733 | FIX | 1 |
| REGION54 | chr2:243059660-243189373 | FIX | 1 |
| REGION55 | chr2:95326172-95618108 | FIX | 1 |
| REGION56 | chr4:190828226-191044276 | FIX | 1 |
| REGION57 | chr10:60001-224405 | FIX | 1 |
| REGION58 | chr12:10953894-11330216 | NOVEL | 2 |
| REGION59 | chrX:803878-1227822 | FIX | 1 |
| REGION6 | chr4:34519577-34885480 | NOVEL | 1 |
| REGION60 | chr1:31872759-32017063 | FIX | 1 |
| REGION61 | chr5:29036605-29254576 | NOVEL | 1 |
| REGION62 | chr8:1965390-2498608 | FIX | 1 |
| REGION63 | chr11:69614786-69922571 | FIX | 1 |
| REGION64 | chr3:60558332-60952039 | FIX | 1 |
| REGION65 | chr17:65936106-66324470 | FIX | 1 |
| REGION66 | chr19:8634915-8926179 | FIX | 1 |
| REGION67 | chrX:151734490-154906585 | FIX | 1 |
| REGION69 | chr17:77412077-77766016 | FIX | 1 |
| REGION7 | chr4:156756530-156908416 | NOVEL | 1 |
| REGION73 | chr3:11856742-12027971 | NOVEL | 1 |
| REGION74 | chr16:57774022-57871358 | FIX | 1 |
| REGION75 | chrX:36202464-37669766 | FIX | 2 |
| REGION76 | chrX:75200416-77450502 | FIX | 2 |
| REGION77 | chr1:3823584-3845268 | FIX | 1 |
| REGION78 | chr1:205916833-205922707 | FIX | 1 |
| REGION79 | chr1:235167042-235192211 | FIX | 1 |
| REGION8 | chr5:161800673-161968654 | NOVEL | 1 |
| REGION80 | chr6:26585843-26826779 | FIX | 1 |
| REGION81 | chr9:132892850-133073060 | FIX | 1 |
| REGION82 | chr9:137025633-137247659 | FIX | 2 |
| REGION83 | chr22:16050001-16087693 | FIX | 1 |
| REGION84 | chr22:16656462-16697850 | FIX | 1 |
| REGION85 | chr22:16847851-16884805 | FIX | 1 |
| REGION86 | chr22:51203354-51244566 | FIX | 1 |
| REGION87 | chrX:45534581-45805400 | FIX | 1 |
| REGION88 | chrX:62203738-63086230 | FIX | 1 |
| REGION89 | chrX:71530834-72366730 | FIX | 1 |
| REGION9 | chr5:12681538-12744122 | NOVEL | 1 |
| REGION90 | chrX:100573313-100962928 | FIX | 1 |
| REGION91 | chrX:101383115-101773566 | FIX | 1 |
| REGION92 | chrX:103118514-103552339 | FIX | 1 |
| REGION93 | chrX:112661943-115918761 | FIX | 4 |
| REGION94 | chrX:119081534-119495352 | FIX | 1 |
| REGION95 | chrX:134202887-135196638 | FIX | 1 |
| REGION96 | chrX:139986363-140891303 | FIX | 1 |
| REGION97 | chrX:142299066-150174083 | FIX | 2 |
| REGION99 | chr6:169194170-169351741 | NOVEL | 1 |
| SCXB | chr8:145285645-145659901 | FIX | 1 |
| SEMA3B | chr3:50267585-50368277 | FIX | 1 |
| SH2B2 | chr7:101718951-102072447 | FIX | 1 |
| SHANK2 | chr11:70301893-71088948 | FIX | 1 |
| SLC25A26 | chr3:66270271-66308065 | FIX | 1 |
| SLC37A4 | chr11:118849111-118957986 | FIX | 1 |
| SLC46A1 | chr17:26645159-26840019 | FIX | 1 |
| SMA | chr5:68512646-70910270 | NOVEL | 1 |
| SNTB2 | chr16:69174054-69258593 | NOVEL | 1 |
| SOCS7 | chr17:36372617-36711255 | FIX | 1 |
| SPC25 | chr2:169686873-169793704 | NOVEL | 1 |
| SPON1 | chr11:13963464-14425744 | FIX | 1 |
| SYNM | chr15:99529037-99696045 | FIX | 1 |
| TEX13A | chrX:104423968-104489003 | FIX | 1 |
| TMEM242 | chr6:157539699-157789039 | FIX | 1 |
| TMEM50B | chr21:34777735-34884866 | NOVEL | 1 |
| TRB | chr7:141557850-142778624 | FIX | 1 |
| TREH | chr11:118245278-118653701 | FIX | 1 |
| TTC25 | chr17:39869611-40277911 | FIX | 1 |
| UGT2B17 | chr4:69170077-69878175 | ALT | 1 |
| VPRBP | chr3:51416109-51584055 | FIX | 1 |
| WILLIAMS | chr7:71935722-75921852 | FIX | 1 |
| ZNF518A | chr10:97861451-98039369 | FIX | 1 |
| ZNF595_ZNF718 | chr4:10001-507004 | FIX | 1 |
| ZNF66 | chr19:20845947-21225187 | NOVEL | 1 |
| General | |
|---|---|
| Assembly name | GRCh37.p13 |
| Release date | 2013-06-28 |
| Assembly type | haploid-with-alt-loci |
| Release type | patch |
| Assembly units | 12 |
| Total bases | 3,234,834,689 |
| Total non-N bases | 2,991,688,216 |
| Primary assembly N50 | 46,395,641 |
| Regions | |
|---|---|
| Total regions | 182 |
| Regions with alternate loci | 3 |
| Regions with FIX patches | 131 |
| Regions with NOVEL patches | 73 |
| Regions as PAR | 4 |
| Alternate loci and patches | |
|---|---|
| Alternate loci | 9 |
| Alternate loci aligned to primary assembly | 9 |
| FIX patches | 131 |
| FIX patches aligned to primary assembly | 131 |
| NOVEL patches | 73 |
| NOVEL patches aligned to primary assembly | 73 |