Feb 23, 2018
GRCg6: Curation of the chicken reference genome assembly transfers to the GRC
Feb 09, 2018
Human Genome Overview
Information about the continuing improvement of the human genome
The GRC is working hard to provide the best possible reference assembly for human. We do this by both generating multiple representations (alternate loci) for regions that are too complex to be represented by a single path. Additionally, we are releasing regional fixes known as patches. This allows users who are interested in a specific locus to get an improved representation without affecting users who need chromosome coordinate stability.
Download data:
Transitioning to GRCh38? Try the NCBI Remapping Service, which uses the same assembly-assembly alignments used by the GRC.
Next assembly update
The GRC will review data for the next assembly update in summer 2018.Loading ideogram...
Ideogram of the latest human assembly, GRCh38.p12
GRCh38.p12
- Release date: December 21, 2017
- Release type: minor
- Release notes: GRCh38.p12 is the twelfth patch release for the GRCh38 reference assembly. No chromosome coordinates changed. This release includes 6 FIX and 11 NOVEL patches. The total number of patch scaffolds is now: 70 FIX and 70 NOVEL.
- Assembly accessions: GenBank: GCA_000001405.27 , RefSeq: GCF_000001405.38
| Name | Chr | Start | Stop |
|---|---|---|---|
| PAR#1 | X | 10,001 | 2,781,479 |
| PAR#2 | X | 155,701,383 | 156,030,895 |
| PAR#1 | Y | 10,001 | 2,781,479 |
| PAR#2 | Y | 56,887,903 | 57,217,415 |
| Name | Chr | Start | Stop | Length |
|---|---|---|---|---|
| CEN1 | 1 | 122,026,460 | 125,184,587 | 3,158,128 |
| CEN2 | 2 | 92,188,146 | 94,090,557 | 1,902,412 |
| CEN3 | 3 | 90,772,459 | 93,655,574 | 2,883,116 |
| CEN4 | 4 | 49,708,101 | 51,743,951 | 2,035,851 |
| CEN5 | 5 | 46,485,901 | 50,059,807 | 3,573,907 |
| CEN6 | 6 | 58,553,889 | 59,829,934 | 1,276,046 |
| CEN7 | 7 | 58,169,654 | 60,828,234 | 2,658,581 |
| HET7 | 7 | 61,377,789 | 61,528,020 | 150,232 |
| CEN8 | 8 | 44,033,745 | 45,877,265 | 1,843,521 |
| CEN9 | 9 | 43,236,168 | 45,518,558 | 2,282,391 |
| CEN10 | 10 | 39,686,683 | 41,593,521 | 1,906,839 |
| CEN11 | 11 | 51,078,349 | 54,425,074 | 3,346,726 |
| CEN12 | 12 | 34,769,408 | 37,185,252 | 2,415,845 |
| CEN13 | 13 | 16,000,001 | 18,051,248 | 2,051,248 |
| CEN14 | 14 | 16,000,001 | 18,173,523 | 2,173,523 |
| CEN15 | 15 | 17,000,001 | 19,725,254 | 2,725,254 |
| CEN16 | 16 | 36,311,159 | 38,280,682 | 1,969,524 |
| CEN17 | 17 | 22,813,680 | 26,885,980 | 4,072,301 |
| CEN18 | 18 | 15,460,900 | 20,861,206 | 5,400,307 |
| CEN19 | 19 | 24,498,981 | 27,190,874 | 2,691,894 |
| CEN20 | 20 | 26,436,233 | 30,038,348 | 3,602,116 |
| CEN21 | 21 | 10,864,561 | 12,915,808 | 2,051,248 |
| CEN22 | 22 | 12,954,789 | 15,054,318 | 2,099,530 |
| CENX | X | 58,605,580 | 62,412,542 | 3,806,963 |
| CENY | Y | 10,316,945 | 10,544,039 | 227,095 |
Filter by:
| Scaffold IDs | Assembly unit | Region name | Chr | Start | Stop | Type |
|---|---|---|---|---|---|---|
| KI270762.1 | NT_187515.1 | ALT_REF_LOCI_1 | REGION108 | 1 | 2,448,811 | 2,791,270 | alt |
| KI270766.1 | NT_187517.1 | ALT_REF_LOCI_1 | PRAME_REGION_1 | 1 | 12,818,488 | 13,312,803 | alt |
| KQ031383.1 | NW_012132914.1 | PATCHES | PRAME_REGION_1 | 1 | 12,818,488 | 13,312,803 | fix |
| KQ983255.1 | NW_015495298.1 | PATCHES | PRAME_REGION_1 | 1 | 12,818,488 | 13,312,803 | novel |
| KN538361.1 | NW_011332688.1 | PATCHES | REGION200 | 1 | 17,157,487 | 17,460,319 | fix |
| KQ458383.1 | NW_014040926.1 | PATCHES | REGION228 | 1 | 23,237,486 | 23,579,959 | novel |
| KN196473.1 | NW_009646195.1 | PATCHES | REGION189 | 1 | 26,512,383 | 26,678,582 | fix |
| KZ208904.1 | NW_018654706.1 | PATCHES | REGION246 | 1 | 28,206,357 | 28,366,763 | novel |
| KZ559100.1 | NW_019805487.1 | PATCHES | REGION261 | 1 | 29,545,040 | 29,590,578 | fix |
| KI270760.1 | NT_187514.1 | ALT_REF_LOCI_1 | REGION109 | 1 | 30,352,191 | 30,456,601 | alt |
| KN196472.1 | NW_009646194.1 | PATCHES | FOXO6 | 1 | 41,250,328 | 41,436,604 | fix |
| KZ208905.1 | NW_018654707.1 | PATCHES | REGION247 | 1 | 72,287,734 | 72,419,130 | novel |
| KQ458382.1 | NW_014040925.1 | PATCHES | REGION229 | 1 | 103,909,381 | 104,045,121 | novel |
| KV880763.1 | NW_017852928.1 | PATCHES | REGION240 | 1 | 107,987,825 | 108,539,424 | novel |
| KN196474.1 | NW_009646196.1 | PATCHES | REGION190 | 1 | 112,909,422 | 113,029,606 | fix |
| KI270765.1 | NT_187520.1 | ALT_REF_LOCI_1 | 1Q21 | 1 | 144,488,706 | 144,674,781 | alt |
| GL383518.1 | NW_003315905.1 | ALT_REF_LOCI_1 | REGION2 | 1 | 153,700,531 | 153,865,738 | alt |
| GL383519.1 | NW_003315906.1 | ALT_REF_LOCI_1 | MTX1 | 1 | 155,210,382 | 155,305,245 | alt |
| GL383520.2 | NW_003315907.2 | ALT_REF_LOCI_1 | REGION3 | 1 | 198,370,083 | 198,725,175 | alt |
| KN538360.1 | NW_011332687.1 | PATCHES | REGION199 | 1 | 210,220,259 | 210,677,001 | fix |
| KZ208906.1 | NW_018654708.1 | PATCHES | RNA5S_REGION_1 | 1 | 228,408,802 | 228,753,027 | fix |
| KI270764.1 | NT_187521.1 | ALT_REF_LOCI_1 | REGION110 | 1 | 234,163,457 | 234,211,370 | alt |
| KQ458384.1 | NW_014040927.1 | PATCHES | TBCE | 1 | 235,360,200 | 235,568,613 | novel |
| KI270763.1 | NT_187519.1 | ALT_REF_LOCI_1 | REGION111 | 1 | 242,987,893 | 243,895,211 | alt |
| KI270759.1 | NT_187516.1 | ALT_REF_LOCI_1 | REGION112 | 1 | 245,305,697 | 245,727,576 | alt |
| KI270761.1 | NT_187518.1 | ALT_REF_LOCI_1 | OLFACTORY_REGION_3 | 1 | 248,352,027 | 248,511,794 | alt |
| KI270892.1 | NT_187646.1 | ALT_REF_LOCI_2 | OLFACTORY_REGION_3 | 1 | 248,352,027 | 248,511,794 | alt |
| KI270770.1 | NT_187525.1 | ALT_REF_LOCI_1 | REGION113 | 2 | 728,878 | 860,300 | alt |
| KI270773.1 | NT_187526.1 | ALT_REF_LOCI_1 | REGION114 | 2 | 1,204,935 | 1,273,724 | alt |
| KI270774.1 | NT_187529.1 | ALT_REF_LOCI_1 | REGION115 | 2 | 1,315,177 | 1,541,254 | alt |
| KI270769.1 | NT_187522.1 | ALT_REF_LOCI_1 | REGION121 | 2 | 3,391,898 | 3,511,146 | alt |
| GL383521.1 | NW_003315908.1 | ALT_REF_LOCI_1 | REGION4 | 2 | 36,225,959 | 36,363,315 | alt |
| KQ031384.1 | NW_012132915.1 | PATCHES | IGK | 2 | 88,891,175 | 89,330,679 | fix |
| KI270772.1 | NT_187524.1 | ALT_REF_LOCI_1 | REGION116 | 2 | 90,218,337 | 90,402,511 | alt |
| KI270894.1 | NT_187648.1 | ALT_REF_LOCI_2 | REGION116 | 2 | 90,218,337 | 90,402,511 | alt |
| KI270775.1 | NT_187531.1 | ALT_REF_LOCI_1 | REGION117 | 2 | 115,908,855 | 116,040,717 | alt |
| KI270771.1 | NT_187530.1 | ALT_REF_LOCI_1 | REGION118 | 2 | 116,874,515 | 116,981,849 | alt |
| KZ208907.1 | NW_018654709.1 | PATCHES | REGION248 | 2 | 126,189,128 | 126,361,783 | novel |
| KI270768.1 | NT_187528.1 | ALT_REF_LOCI_1 | REGION119 | 2 | 131,697,037 | 131,806,107 | alt |
| GL582966.2 | NW_003571033.2 | ALT_REF_LOCI_1 | REGION44 | 2 | 148,934,069 | 149,024,119 | alt |
| GL383522.1 | NW_003315909.1 | ALT_REF_LOCI_1 | SPC25 | 2 | 168,830,363 | 168,937,194 | alt |
| KQ983256.1 | NW_015495299.1 | PATCHES | REGION233 | 2 | 205,890,983 | 206,421,450 | novel |
| KZ208908.1 | NW_018654710.1 | PATCHES | REGION249 | 2 | 208,007,848 | 208,142,067 | novel |
| KN538363.1 | NW_011332690.1 | PATCHES | REGION201 | 2 | 233,054,663 | 233,420,161 | fix |
| KN538362.1 | NW_011332689.1 | PATCHES | REGION202 | 2 | 239,696,904 | 239,905,046 | fix |
| KI270767.1 | NT_187523.1 | ALT_REF_LOCI_1 | REGION120 | 2 | 241,787,903 | 242,117,508 | alt |
| KI270776.1 | NT_187527.1 | ALT_REF_LOCI_1 | REGION120 | 2 | 241,787,903 | 242,117,508 | alt |
| KI270893.1 | NT_187647.1 | ALT_REF_LOCI_2 | REGION120 | 2 | 241,787,903 | 242,117,508 | alt |
| JH636055.2 | NW_003871060.2 | ALT_REF_LOCI_1 | REGION73 | 3 | 11,815,268 | 11,986,497 | alt |
| KV766192.1 | NW_017363813.1 | PATCHES | REGION235 | 3 | 16,687,511 | 17,099,186 | fix |
| KI270783.1 | NT_187535.1 | ALT_REF_LOCI_1 | REGION122 | 3 | 20,277,967 | 20,382,602 | alt |
| KN196475.1 | NW_009646197.1 | PATCHES | REGION192 | 3 | 44,474,647 | 44,925,818 | fix |
| KQ031385.1 | NW_012132916.1 | PATCHES | SLC25A26 | 3 | 66,023,201 | 66,396,803 | fix |
| KN538364.1 | NW_011332691.1 | PATCHES | RYBP | 3 | 72,325,441 | 72,740,399 | fix |
| KZ208909.1 | NW_018654711.1 | PATCHES | REGION250 | 3 | 84,799,968 | 84,960,626 | novel |
| KQ031386.1 | NW_012132917.1 | PATCHES | REGION210 | 3 | 90,528,825 | 90,699,772 | fix |
| KN196476.1 | NW_009646198.1 | PATCHES | REGION191 | 3 | 91,247,723 | 91,553,319 | fix |
| KZ559104.1 | NW_019805491.1 | PATCHES | REGION262 | 3 | 94,896,163 | 94,997,637 | fix |
| KZ559105.1 | NW_019805492.1 | PATCHES | REGION263 | 3 | 112,116,711 | 112,302,325 | novel |
| KI270780.1 | NT_187537.1 | ALT_REF_LOCI_1 | REGION123 | 3 | 125,665,519 | 125,883,802 | alt |
| KZ559103.1 | NW_019805490.1 | PATCHES | REGION264 | 3 | 128,137,812 | 128,433,766 | novel |
| GL383526.1 | NW_003315913.1 | ALT_REF_LOCI_1 | REGION5 | 3 | 151,589,366 | 151,759,498 | alt |
| KI270777.1 | NT_187533.1 | ALT_REF_LOCI_1 | REGION124 | 3 | 154,111,571 | 154,282,042 | alt |
| KI270778.1 | NT_187536.1 | ALT_REF_LOCI_1 | REGION125 | 3 | 166,300,784 | 166,544,173 | alt |
| KZ559102.1 | NW_019805489.1 | PATCHES | REGION265 | 3 | 175,333,210 | 175,524,240 | novel |
| KZ559101.1 | NW_019805488.1 | PATCHES | REGION266 | 3 | 176,115,490 | 176,274,065 | novel |
| KI270781.1 | NT_187538.1 | ALT_REF_LOCI_1 | REGION126 | 3 | 184,425,340 | 184,533,338 | alt |
| KI270779.1 | NT_187532.1 | ALT_REF_LOCI_1 | MUCIN_REGION_2 | 3 | 195,629,504 | 195,827,492 | alt |
| KI270895.1 | NT_187649.1 | ALT_REF_LOCI_2 | MUCIN_REGION_2 | 3 | 195,629,504 | 195,827,492 | alt |
| KI270924.1 | NT_187678.1 | ALT_REF_LOCI_3 | MUCIN_REGION_2 | 3 | 195,629,504 | 195,827,492 | alt |
| KI270934.1 | NT_187688.1 | ALT_REF_LOCI_4 | MUCIN_REGION_2 | 3 | 195,629,504 | 195,827,492 | alt |
| KI270935.1 | NT_187689.1 | ALT_REF_LOCI_5 | MUCIN_REGION_2 | 3 | 195,629,504 | 195,827,492 | alt |
| KI270936.1 | NT_187690.1 | ALT_REF_LOCI_6 | MUCIN_REGION_2 | 3 | 195,629,504 | 195,827,492 | alt |
| KI270937.1 | NT_187691.1 | ALT_REF_LOCI_7 | MUCIN_REGION_2 | 3 | 195,629,504 | 195,827,492 | alt |
| KI270782.1 | NT_187534.1 | ALT_REF_LOCI_1 | REGION127 | 3 | 197,397,856 | 197,558,882 | alt |
| KI270784.1 | NT_187539.1 | ALT_REF_LOCI_1 | REGION128 | 3 | 198,047,549 | 198,235,559 | alt |
| KQ090013.1 | NW_013171799.1 | PATCHES | REGION222 | 4 | 14,931,450 | 15,019,028 | novel |
| KI270790.1 | NT_187540.1 | ALT_REF_LOCI_1 | REGION129 | 4 | 21,521,367 | 21,734,410 | alt |
| GL383528.1 | NW_003315915.1 | ALT_REF_LOCI_1 | REGION6 | 4 | 34,517,955 | 34,883,858 | alt |
| KI270787.1 | NT_187541.1 | ALT_REF_LOCI_1 | REGION130 | 4 | 55,678,095 | 55,785,754 | alt |
| KQ090014.1 | NW_013171800.1 | PATCHES | REGION223 | 4 | 65,880,454 | 66,040,277 | novel |
| GL000257.2 | NT_167250.2 | ALT_REF_LOCI_1 | UGT2B17 | 4 | 68,306,359 | 69,010,457 | alt |
| KQ090015.1 | NW_013171801.1 | PATCHES | REGION224 | 4 | 69,959,865 | 70,191,926 | novel |
| KI270788.1 | NT_187544.1 | ALT_REF_LOCI_1 | REGION131 | 4 | 120,164,199 | 120,317,014 | alt |
| KV766193.1 | NW_017363814.1 | PATCHES | REGION236 | 4 | 154,079,465 | 154,493,046 | novel |
| GL383527.1 | NW_003315914.1 | ALT_REF_LOCI_1 | REGION7 | 4 | 155,835,378 | 155,987,264 | alt |
| KI270785.1 | NT_187542.1 | ALT_REF_LOCI_1 | REGION132 | 4 | 186,920,392 | 187,048,061 | alt |
| KI270789.1 | NT_187545.1 | ALT_REF_LOCI_1 | REGION133 | 4 | 188,341,423 | 188,542,359 | alt |
| KI270786.1 | NT_187543.1 | ALT_REF_LOCI_1 | REGION134 | 4 | 189,361,858 | 190,204,555 | alt |
| KI270896.1 | NT_187650.1 | ALT_REF_LOCI_2 | REGION134 | 4 | 189,361,858 | 190,204,555 | alt |
| KI270925.1 | NT_187679.1 | ALT_REF_LOCI_3 | REGION134 | 4 | 189,361,858 | 190,204,555 | alt |
| KQ983257.1 | NW_015495300.1 | PATCHES | REGION134 | 4 | 189,361,858 | 190,204,555 | fix |
| KQ983258.1 | NW_015495301.1 | PATCHES | REGION134 | 4 | 189,361,858 | 190,204,555 | novel |
| KI270793.1 | NT_187550.1 | ALT_REF_LOCI_1 | REGION135 | 5 | 502,435 | 626,896 | alt |
| KI270792.1 | NT_187548.1 | ALT_REF_LOCI_1 | SLC12A7 | 5 | 981,494 | 1,161,361 | alt |
| KI270791.1 | NT_187547.1 | ALT_REF_LOCI_1 | SLC6A3 | 5 | 1,318,299 | 1,509,772 | alt |
| KZ208910.1 | NW_018654712.1 | PATCHES | REGION251 | 5 | 3,768,476 | 3,899,281 | novel |
| GL383532.1 | NW_003315920.1 | ALT_REF_LOCI_1 | REGION9 | 5 | 12,681,426 | 12,744,010 | alt |
| KN196477.1 | NW_009646199.1 | PATCHES | REGION193 | 5 | 21,098,347 | 21,230,960 | novel |
| KV575243.1 | NW_016107297.1 | PATCHES | GUSBP1 | 5 | 21,481,419 | 21,713,081 | novel |
| GL949742.1 | NW_003571036.1 | ALT_REF_LOCI_1 | REGION61 | 5 | 29,036,498 | 29,254,469 | alt |
| KI270794.1 | NT_187551.1 | ALT_REF_LOCI_1 | REGION136 | 5 | 33,800,665 | 33,963,236 | alt |
| GL339449.2 | NW_003315917.2 | ALT_REF_LOCI_1 | SMA | 5 | 69,216,819 | 71,614,443 | alt |
| KI270897.1 | NT_187651.1 | ALT_REF_LOCI_2 | SMA | 5 | 69,216,819 | 71,614,443 | alt |
| GL383530.1 | NW_003315918.1 | ALT_REF_LOCI_1 | MCTP1 | 5 | 95,169,857 | 95,254,491 | alt |
| KI270796.1 | NT_187549.1 | ALT_REF_LOCI_1 | REGION137 | 5 | 125,279,466 | 125,444,151 | alt |
| GL383531.1 | NW_003315919.1 | ALT_REF_LOCI_1 | REGION8 | 5 | 162,373,667 | 162,541,648 | alt |
| KI270795.1 | NT_187546.1 | ALT_REF_LOCI_1 | REGION138 | 5 | 177,865,465 | 177,996,111 | alt |
| KI270898.1 | NT_187652.1 | ALT_REF_LOCI_2 | REGION138 | 5 | 177,865,465 | 177,996,111 | alt |
| KV575244.1 | NW_016107298.1 | PATCHES | REGION234 | 5 | 179,235,294 | 179,907,499 | fix |
| KZ208911.1 | NW_018654713.1 | PATCHES | GCNT2 | 6 | 10,489,117 | 10,731,912 | fix |
| KQ090017.1 | NW_013171803.1 | PATCHES | REGION225 | 6 | 13,101,650 | 13,179,113 | novel |
| GL000250.2 | NT_167244.2 | ALT_REF_LOCI_1 | MHC | 6 | 28,510,120 | 33,480,577 | alt |
| GL000251.2 | NT_113891.3 | ALT_REF_LOCI_2 | MHC | 6 | 28,510,120 | 33,480,577 | alt |
| GL000252.2 | NT_167245.2 | ALT_REF_LOCI_3 | MHC | 6 | 28,510,120 | 33,480,577 | alt |
| GL000253.2 | NT_167246.2 | ALT_REF_LOCI_4 | MHC | 6 | 28,510,120 | 33,480,577 | alt |
| GL000254.2 | NT_167247.2 | ALT_REF_LOCI_5 | MHC | 6 | 28,510,120 | 33,480,577 | alt |
| GL000255.2 | NT_167248.2 | ALT_REF_LOCI_6 | MHC | 6 | 28,510,120 | 33,480,577 | alt |
| GL000256.2 | NT_167249.2 | ALT_REF_LOCI_7 | MHC | 6 | 28,510,120 | 33,480,577 | alt |
| KI270758.1 | NT_187692.1 | ALT_REF_LOCI_8 | MHC | 6 | 28,510,120 | 33,480,577 | alt |
| KQ031387.1 | NW_012132918.1 | PATCHES | REGION211 | 6 | 61,123,605 | 61,470,683 | fix |
| KI270800.1 | NT_187555.1 | ALT_REF_LOCI_1 | REGION139 | 6 | 65,774,814 | 65,944,033 | alt |
| KN196478.1 | NW_009646200.1 | PATCHES | REGION194 | 6 | 67,533,466 | 67,796,090 | fix |
| KI270799.1 | NT_187554.1 | ALT_REF_LOCI_1 | REGION140 | 6 | 68,262,879 | 68,402,208 | alt |
| GL383533.1 | NW_003315921.1 | ALT_REF_LOCI_1 | REGION10 | 6 | 79,350,008 | 79,446,911 | alt |
| KQ090016.1 | NW_013171802.1 | PATCHES | REGION214 | 6 | 82,140,389 | 82,375,901 | fix |
| KV766194.1 | NW_017363815.1 | PATCHES | CASP8AP2 | 6 | 89,804,656 | 89,941,739 | fix |
| KI270801.1 | NT_187556.1 | ALT_REF_LOCI_1 | REGION141 | 6 | 127,654,803 | 128,521,146 | alt |
| KI270802.1 | NT_187557.1 | ALT_REF_LOCI_1 | REGION142 | 6 | 166,220,580 | 166,285,980 | alt |
| KB021644.2 | NW_004166862.2 | ALT_REF_LOCI_1 | REGION99 | 6 | 168,796,076 | 168,951,646 | alt |
| KI270797.1 | NT_187552.1 | ALT_REF_LOCI_1 | REGION143 | 6 | 169,724,799 | 169,919,706 | alt |
| KI270798.1 | NT_187553.1 | ALT_REF_LOCI_1 | REGION144 | 6 | 170,272,763 | 170,535,221 | alt |
| KI270804.1 | NT_187558.1 | ALT_REF_LOCI_1 | REGION145 | 7 | 10,001 | 198,548 | alt |
| KI270899.1 | NT_187653.1 | ALT_REF_LOCI_2 | REGION145 | 7 | 10,001 | 198,548 | alt |
| KZ559106.1 | NW_019805493.1 | PATCHES | REGION267 | 7 | 9,026,358 | 9,192,359 | novel |
| KI270809.1 | NT_187561.1 | ALT_REF_LOCI_1 | REGION146 | 7 | 76,500,982 | 76,722,751 | alt |
| KV880764.1 | NW_017852929.1 | PATCHES | REGION241 | 7 | 99,092,372 | 99,228,806 | fix |
| KI270806.1 | NT_187559.1 | ALT_REF_LOCI_1 | REGION147 | 7 | 103,086,563 | 103,242,097 | alt |
| KV880765.1 | NW_017852930.1 | PATCHES | REGION242 | 7 | 107,154,479 | 107,622,612 | fix |
| GL383534.2 | NW_003315922.2 | ALT_REF_LOCI_1 | REGION11 | 7 | 141,633,409 | 141,746,583 | alt |
| KI270803.1 | NT_187562.1 | ALT_REF_LOCI_1 | TRB | 7 | 142,038,121 | 143,088,503 | alt |
| KZ208912.1 | NW_018654714.1 | PATCHES | REGION252 | 7 | 143,380,637 | 144,630,931 | fix |
| KZ208913.1 | NW_018654715.1 | PATCHES | REGION252 | 7 | 143,380,637 | 144,630,931 | novel |
| KI270808.1 | NT_187564.1 | ALT_REF_LOCI_1 | REGION148 | 7 | 148,214,874 | 148,487,860 | alt |
| KQ031388.1 | NW_012132919.1 | PATCHES | REGION212 | 7 | 154,422,352 | 154,602,937 | fix |
| KI270807.1 | NT_187563.1 | ALT_REF_LOCI_1 | REGION149 | 7 | 157,697,532 | 157,820,586 | alt |
| KI270805.1 | NT_187560.1 | ALT_REF_LOCI_1 | REGION150 | 7 | 158,267,495 | 158,477,174 | alt |
| KI270811.1 | NT_187565.1 | ALT_REF_LOCI_1 | REGION151 | 8 | 718,410 | 2,817,440 | alt |
| KI270812.1 | NT_187568.1 | ALT_REF_LOCI_1 | REGION151 | 8 | 718,410 | 2,817,440 | alt |
| KI270818.1 | NT_187572.1 | ALT_REF_LOCI_1 | REGION151 | 8 | 718,410 | 2,817,440 | alt |
| KI270821.1 | NT_187576.1 | ALT_REF_LOCI_1 | REGION151 | 8 | 718,410 | 2,817,440 | alt |
| KI270900.1 | NT_187654.1 | ALT_REF_LOCI_2 | REGION151 | 8 | 718,410 | 2,817,440 | alt |
| KI270901.1 | NT_187655.1 | ALT_REF_LOCI_2 | REGION151 | 8 | 718,410 | 2,817,440 | alt |
| KI270926.1 | NT_187680.1 | ALT_REF_LOCI_3 | REGION151 | 8 | 718,410 | 2,817,440 | alt |
| KI270813.1 | NT_187570.1 | ALT_REF_LOCI_1 | DEFENSIN_REGION_1 | 8 | 6,604,731 | 13,171,905 | alt |
| KZ208915.1 | NW_018654717.1 | PATCHES | DEFENSIN_REGION_1 | 8 | 6,604,731 | 13,171,905 | fix |
| KV880767.1 | NW_017852932.1 | PATCHES | REGION243 | 8 | 21,395,510 | 21,659,610 | fix |
| KI270822.1 | NT_187577.1 | ALT_REF_LOCI_1 | ADAM5 | 8 | 39,094,318 | 39,873,856 | alt |
| KV880766.1 | NW_017852931.1 | PATCHES | REGION244 | 8 | 57,022,151 | 57,173,350 | fix |
| KI270814.1 | NT_187566.1 | ALT_REF_LOCI_1 | REGION152 | 8 | 57,173,351 | 57,303,398 | alt |
| KI270810.1 | NT_187567.1 | ALT_REF_LOCI_1 | REGION153 | 8 | 128,554,723 | 128,925,740 | alt |
| KZ559107.1 | NW_019805494.1 | PATCHES | REGION268 | 8 | 129,724,678 | 129,818,699 | novel |
| KI270819.1 | NT_187574.1 | ALT_REF_LOCI_1 | REGION154 | 8 | 141,333,447 | 141,461,079 | alt |
| KI270820.1 | NT_187575.1 | ALT_REF_LOCI_1 | REGION155 | 8 | 141,766,834 | 141,800,272 | alt |
| KI270817.1 | NT_187573.1 | ALT_REF_LOCI_1 | REGION156 | 8 | 143,009,713 | 143,163,398 | alt |
| KI270816.1 | NT_187571.1 | ALT_REF_LOCI_1 | REGION157 | 8 | 143,509,961 | 143,828,794 | alt |
| KZ208914.1 | NW_018654716.1 | PATCHES | SLC39A4 | 8 | 144,269,398 | 144,434,518 | fix |
| KI270815.1 | NT_187569.1 | ALT_REF_LOCI_1 | REGION158 | 8 | 144,628,750 | 144,757,761 | alt |
| GL383539.1 | NW_003315928.1 | ALT_REF_LOCI_1 | REGION14 | 9 | 7,428,994 | 7,577,169 | alt |
| KQ090018.1 | NW_013171804.1 | PATCHES | REGION226 | 9 | 8,983,671 | 9,142,737 | novel |
| KQ090019.1 | NW_013171805.1 | PATCHES | REGION227 | 9 | 24,949,709 | 25,079,413 | novel |
| GL383540.1 | NW_003315929.1 | ALT_REF_LOCI_1 | REGION13 | 9 | 69,413,743 | 69,477,097 | alt |
| GL383541.1 | NW_003315930.1 | ALT_REF_LOCI_1 | MAMDC2 | 9 | 70,024,113 | 70,189,318 | alt |
| GL383542.1 | NW_003315931.1 | ALT_REF_LOCI_1 | REGION15 | 9 | 88,179,047 | 88,227,980 | alt |
| KI270823.1 | NT_187578.1 | ALT_REF_LOCI_1 | LPPR1 | 9 | 100,948,798 | 101,378,291 | alt |
| KN196479.1 | NW_009646201.1 | PATCHES | ABO | 9 | 133,174,055 | 133,504,070 | fix |
| GL383545.1 | NW_003315934.1 | ALT_REF_LOCI_1 | REGION16 | 10 | 27,285,655 | 27,417,608 | alt |
| KN538367.1 | NW_011332694.1 | PATCHES | REGION205 | 10 | 38,918,270 | 39,338,430 | fix |
| KI270824.1 | NT_187579.1 | ALT_REF_LOCI_1 | REGION159 | 10 | 42,103,240 | 42,298,939 | alt |
| GL383546.1 | NW_003315935.1 | ALT_REF_LOCI_1 | REGION18 | 10 | 45,175,233 | 45,468,971 | alt |
| KQ090020.1 | NW_013171806.1 | PATCHES | REGION216 | 10 | 65,503,225 | 65,684,914 | novel |
| KN196480.1 | NW_009646202.1 | PATCHES | REGION195 | 10 | 74,797,382 | 75,073,121 | fix |
| KI270825.1 | NT_187580.1 | ALT_REF_LOCI_1 | REGION160 | 10 | 77,761,309 | 77,931,226 | alt |
| KQ090021.1 | NW_013171807.1 | PATCHES | PTEN | 10 | 87,784,179 | 88,048,756 | fix |
| KN538366.1 | NW_011332693.1 | PATCHES | REGION204 | 10 | 124,109,957 | 124,195,365 | fix |
| KN538365.1 | NW_011332692.1 | PATCHES | REGION203 | 10 | 131,588,434 | 131,607,480 | fix |
| KI270832.1 | NT_187586.1 | ALT_REF_LOCI_1 | REGION104 | 11 | 470,360 | 678,681 | alt |
| KI270902.1 | NT_187656.1 | ALT_REF_LOCI_2 | MUCIN_REGION_1 | 11 | 937,258 | 1,207,515 | alt |
| KI270927.1 | NT_187681.1 | ALT_REF_LOCI_3 | MUCIN_REGION_1 | 11 | 937,258 | 1,207,515 | alt |
| KQ759759.1 | NW_015148966.1 | PATCHES | MUCIN_REGION_1 | 11 | 937,258 | 1,207,515 | fix |
| KI270830.1 | NT_187584.1 | ALT_REF_LOCI_1 | KRTAP_REGION_2 | 11 | 1,523,474 | 1,740,879 | alt |
| KI270903.1 | NT_187657.1 | ALT_REF_LOCI_2 | KRTAP_REGION_2 | 11 | 1,523,474 | 1,740,879 | alt |
| KI270831.1 | NT_187585.1 | ALT_REF_LOCI_1 | REGION105 | 11 | 2,767,814 | 3,065,846 | alt |
| KI270829.1 | NT_187583.1 | ALT_REF_LOCI_1 | OLFACTORY_REGION_2 | 11 | 7,779,133 | 7,972,558 | alt |
| KN538368.1 | NW_011332695.1 | PATCHES | OLFACTORY_REGION_2 | 11 | 7,779,133 | 7,972,558 | novel |
| GL383547.1 | NW_003315936.1 | ALT_REF_LOCI_1 | REGION19 | 11 | 25,170,407 | 25,319,080 | alt |
| KZ559109.1 | NW_019805496.1 | PATCHES | REGION269 | 11 | 47,572,175 | 47,847,277 | fix |
| KZ559108.1 | NW_019805495.1 | PATCHES | REGION270 | 11 | 49,535,823 | 49,841,095 | fix |
| KV766195.1 | NW_017363816.1 | PATCHES | OLFACTORY_REGION_4 | 11 | 49,958,373 | 50,099,251 | fix |
| JH159136.1 | NW_003871073.1 | ALT_REF_LOCI_1 | OLFACTORY_REGION_1 | 11 | 56,189,252 | 56,873,567 | alt |
| JH159137.1 | NW_003871074.1 | ALT_REF_LOCI_1 | OLFACTORY_REGION_1 | 11 | 56,189,252 | 56,873,567 | alt |
| KZ559111.1 | NW_019805498.1 | PATCHES | REGION271 | 11 | 59,910,346 | 60,087,289 | novel |
| KI270827.1 | NT_187582.1 | ALT_REF_LOCI_1 | REGION106 | 11 | 69,165,291 | 69,229,344 | alt |
| KZ559110.1 | NW_019805497.1 | PATCHES | REGION272 | 11 | 90,093,878 | 90,364,703 | novel |
| KQ090022.1 | NW_013171808.1 | PATCHES | REGION215 | 11 | 92,232,311 | 92,410,192 | fix |
| KN196481.1 | NW_009646203.1 | PATCHES | SLC37A4 | 11 | 118,978,401 | 119,087,276 | fix |
| KI270826.1 | NT_187581.1 | ALT_REF_LOCI_1 | REGION107 | 11 | 134,773,600 | 134,962,792 | alt |
| GL877875.1 | NW_003571049.1 | ALT_REF_LOCI_1 | REGION50 | 12 | 10,001 | 173,298 | alt |
| KQ090023.1 | NW_013171809.1 | PATCHES | REGION217 | 12 | 1,033,530 | 1,135,924 | novel |
| KZ208916.1 | NW_018654718.1 | PATCHES | REGION253 | 12 | 1,657,857 | 2,698,722 | fix |
| GL877876.1 | NW_003571050.1 | ALT_REF_LOCI_1 | PRH1_PRR4 | 12 | 10,801,295 | 11,377,386 | alt |
| KI270837.1 | NT_187588.1 | ALT_REF_LOCI_1 | PRH1_PRR4 | 12 | 10,801,295 | 11,377,386 | alt |
| KI270904.1 | NT_187658.1 | ALT_REF_LOCI_2 | PRH1_PRR4 | 12 | 10,801,295 | 11,377,386 | alt |
| KN538369.1 | NW_011332696.1 | PATCHES | REGION206 | 12 | 12,031,003 | 12,572,035 | fix |
| KN196482.1 | NW_009646204.1 | PATCHES | REGION196 | 12 | 17,717,409 | 17,928,910 | fix |
| GL383549.1 | NW_003315938.1 | ALT_REF_LOCI_1 | REGION21 | 12 | 27,996,034 | 28,110,778 | alt |
| KI270835.1 | NT_187587.1 | ALT_REF_LOCI_1 | OVOS2 | 12 | 31,111,480 | 31,347,345 | alt |
| GL383550.2 | NW_003315939.2 | ALT_REF_LOCI_1 | REGION22 | 12 | 57,932,737 | 58,092,755 | alt |
| GL383552.1 | NW_003315941.1 | ALT_REF_LOCI_1 | REGION23 | 12 | 58,929,265 | 59,060,870 | alt |
| KZ208918.1 | NW_018654720.1 | PATCHES | REGION255 | 12 | 86,094,144 | 86,261,655 | novel |
| KQ759760.1 | NW_015148967.1 | PATCHES | REGION232 | 12 | 86,768,210 | 87,083,988 | fix |
| GL383553.2 | NW_003315942.2 | ALT_REF_LOCI_1 | REGION24 | 12 | 101,111,599 | 101,258,295 | alt |
| KZ208917.1 | NW_018654719.1 | PATCHES | REGION254 | 12 | 121,594,225 | 121,658,918 | fix |
| KN538370.1 | NW_011332697.1 | PATCHES | REGION207 | 12 | 122,057,735 | 122,145,576 | fix |
| KI270834.1 | NT_187590.1 | ALT_REF_LOCI_1 | REGION161 | 12 | 123,826,509 | 123,945,954 | alt |
| GL383551.1 | NW_003315940.1 | ALT_REF_LOCI_1 | REGION20 | 12 | 126,227,198 | 126,405,474 | alt |
| KZ559112.1 | NW_019805499.1 | PATCHES | REGION273 | 12 | 127,053,477 | 127,193,247 | novel |
| KI270833.1 | NT_187589.1 | ALT_REF_LOCI_1 | REGION162 | 12 | 130,323,076 | 130,394,967 | alt |
| KI270836.1 | NT_187591.1 | ALT_REF_LOCI_1 | REGION163 | 12 | 131,543,020 | 131,584,984 | alt |
| KN538372.1 | NW_011332699.1 | PATCHES | BAGE5 | 13 | 18,171,249 | 18,358,106 | fix |
| KI270840.1 | NT_187594.1 | ALT_REF_LOCI_1 | REGION164 | 13 | 18,698,351 | 18,884,136 | alt |
| KI270839.1 | NT_187593.1 | ALT_REF_LOCI_1 | REGION165 | 13 | 25,652,362 | 25,828,680 | alt |
| KI270843.1 | NT_187597.1 | ALT_REF_LOCI_1 | REGION166 | 13 | 70,341,886 | 70,442,876 | alt |
| KQ090024.1 | NW_013171810.1 | PATCHES | REGION218 | 13 | 84,294,441 | 84,452,423 | novel |
| KN196483.1 | NW_009646205.1 | PATCHES | REGION197 | 13 | 86,269,523 | 86,292,877 | fix |
| KI270841.1 | NT_187595.1 | ALT_REF_LOCI_1 | REGION167 | 13 | 89,598,964 | 89,764,093 | alt |
| KN538373.1 | NW_011332700.1 | PATCHES | REGION208 | 13 | 100,900,735 | 101,049,613 | fix |
| KQ090025.1 | NW_013171811.1 | PATCHES | REGION219 | 13 | 108,604,134 | 108,722,945 | novel |
| KI270838.1 | NT_187592.1 | ALT_REF_LOCI_1 | REGION168 | 13 | 112,182,875 | 112,505,943 | alt |
| KI270842.1 | NT_187596.1 | ALT_REF_LOCI_1 | REGION169 | 13 | 113,727,531 | 113,763,795 | alt |
| KN538371.1 | NW_011332698.1 | PATCHES | REGION209 | 13 | 113,936,976 | 114,147,229 | fix |
| KZ208920.1 | NW_018654722.1 | PATCHES | REGION256 | 14 | 23,699,022 | 24,389,954 | fix |
| KZ208919.1 | NW_018654721.1 | PATCHES | REGION257 | 14 | 63,664,049 | 63,829,157 | novel |
| KI270844.1 | NT_187598.1 | ALT_REF_LOCI_1 | REGION170 | 14 | 91,535,865 | 91,854,371 | alt |
| KI270847.1 | NT_187601.1 | ALT_REF_LOCI_1 | IGH | 14 | 92,885,439 | 94,394,539 | alt |
| KI270845.1 | NT_187599.1 | ALT_REF_LOCI_1 | SERPIN_REGION_1 | 14 | 104,449,322 | 104,622,880 | alt |
| KI270846.1 | NT_187600.1 | ALT_REF_LOCI_1 | REGION171 | 14 | 105,533,003 | 106,860,219 | alt |
| KI270848.1 | NT_187603.1 | ALT_REF_LOCI_1 | PRADER_WILLI | 15 | 21,242,091 | 23,226,874 | alt |
| KI270851.1 | NT_187604.1 | ALT_REF_LOCI_1 | PRADER_WILLI | 15 | 21,242,091 | 23,226,874 | alt |
| KI270852.1 | NT_187602.1 | ALT_REF_LOCI_1 | PRADER_WILLI | 15 | 21,242,091 | 23,226,874 | alt |
| KI270906.1 | NT_187659.1 | ALT_REF_LOCI_2 | PRADER_WILLI | 15 | 21,242,091 | 23,226,874 | alt |
| GL383554.1 | NW_003315943.1 | ALT_REF_LOCI_1 | REGION25 | 15 | 27,865,714 | 32,946,929 | alt |
| KI270905.1 | NT_187660.1 | ALT_REF_LOCI_2 | REGION25 | 15 | 27,865,714 | 32,946,929 | alt |
| KQ031389.1 | NW_012132920.1 | PATCHES | REGION25 | 15 | 27,865,714 | 32,946,929 | novel |
| KI270849.1 | NT_187605.1 | ALT_REF_LOCI_1 | TRIM69 | 15 | 44,676,664 | 44,913,053 | alt |
| GL383555.2 | NW_003315944.2 | ALT_REF_LOCI_1 | MEGF11 | 15 | 65,908,183 | 66,284,818 | alt |
| KI270850.1 | NT_187606.1 | ALT_REF_LOCI_1 | REGION172 | 15 | 82,289,984 | 82,641,774 | alt |
| KI270854.1 | NT_187610.1 | ALT_REF_LOCI_1 | RAB11FIP3 | 16 | 400,855 | 531,525 | alt |
| KI270856.1 | NT_187609.1 | ALT_REF_LOCI_1 | REGION173 | 16 | 1,871,895 | 1,933,852 | alt |
| KQ090026.1 | NW_013171812.1 | PATCHES | REGION221 | 16 | 2,820,536 | 2,873,621 | novel |
| KI270855.1 | NT_187608.1 | ALT_REF_LOCI_1 | PAM16 | 16 | 4,299,637 | 4,530,534 | alt |
| KI270853.1 | NT_187607.1 | ALT_REF_LOCI_1 | REGION174 | 16 | 14,427,144 | 16,998,739 | alt |
| KZ559113.1 | NW_019805500.1 | PATCHES | FRA16A | 16 | 16,998,740 | 17,478,916 | fix |
| KV880768.1 | NW_017852933.1 | PATCHES | REGION245 | 16 | 21,176,310 | 22,760,988 | fix |
| GL383556.1 | NW_003315945.1 | ALT_REF_LOCI_1 | REGION26 | 16 | 55,772,981 | 55,968,548 | alt |
| GL383557.1 | NW_003315946.1 | ALT_REF_LOCI_1 | SNTB2 | 16 | 69,140,151 | 69,224,690 | alt |
| KQ090027.1 | NW_013171813.1 | PATCHES | REGION220 | 16 | 71,137,292 | 71,399,966 | novel |
| KZ208921.1 | NW_018654723.1 | PATCHES | CTRB1_CTRB2 | 16 | 75,169,811 | 75,248,387 | novel |
| KQ031390.1 | NW_012132921.1 | PATCHES | REGION213 | 16 | 75,930,096 | 76,091,406 | novel |
| GL383563.3 | NW_003315952.3 | ALT_REF_LOCI_1 | DOC2B_RPH3AL | 17 | 60,001 | 402,637 | alt |
| KI270907.1 | NT_187662.1 | ALT_REF_LOCI_2 | DOC2B_RPH3AL | 17 | 60,001 | 402,637 | alt |
| KV766196.1 | NW_017363817.1 | PATCHES | RFLNB | 17 | 402,638 | 722,442 | fix |
| KI270862.1 | NT_187613.1 | ALT_REF_LOCI_1 | ABR | 17 | 960,754 | 1,449,331 | alt |
| KI270910.1 | NT_187664.1 | ALT_REF_LOCI_2 | ABR | 17 | 960,754 | 1,449,331 | alt |
| KI270861.1 | NT_187611.1 | ALT_REF_LOCI_1 | WDR81 | 17 | 1,569,973 | 1,767,739 | alt |
| KV575245.1 | NW_016107299.1 | PATCHES | POLR2A | 17 | 7,379,544 | 7,534,268 | fix |
| KV766198.1 | NW_017363819.1 | PATCHES | REGION238 | 17 | 18,239,627 | 18,506,313 | novel |
| KI270857.1 | NT_187614.1 | ALT_REF_LOCI_1 | CCL5_TBC1D3 | 17 | 35,765,469 | 38,841,755 | alt |
| KI270909.1 | NT_187661.1 | ALT_REF_LOCI_2 | CCL5_TBC1D3 | 17 | 35,765,469 | 38,841,755 | alt |
| GL383564.2 | NW_003315953.2 | ALT_REF_LOCI_1 | KRTAP_REGION_1 | 17 | 40,850,733 | 41,432,935 | alt |
| JH159146.1 | NW_003871091.1 | ALT_REF_LOCI_1 | KRTAP_REGION_1 | 17 | 40,850,733 | 41,432,935 | alt |
| JH159147.1 | NW_003871092.1 | ALT_REF_LOCI_1 | KRTAP_REGION_1 | 17 | 40,850,733 | 41,432,935 | alt |
| JH159148.1 | NW_003871093.1 | ALT_REF_LOCI_2 | KRTAP_REGION_1 | 17 | 40,850,733 | 41,432,935 | alt |
| GL000258.2 | NT_167251.2 | ALT_REF_LOCI_1 | MAPT | 17 | 45,309,498 | 46,903,773 | alt |
| KI270908.1 | NT_187663.1 | ALT_REF_LOCI_2 | MAPT | 17 | 45,309,498 | 46,903,773 | alt |
| KV766197.1 | NW_017363818.1 | PATCHES | REGION237 | 17 | 52,434,177 | 52,673,566 | novel |
| GL383565.1 | NW_003315954.1 | ALT_REF_LOCI_1 | REGION28 | 17 | 70,306,278 | 70,524,219 | alt |
| KI270858.1 | NT_187615.1 | ALT_REF_LOCI_1 | REGION175 | 17 | 71,584,518 | 71,819,311 | alt |
| KI270859.1 | NT_187616.1 | ALT_REF_LOCI_1 | REGION176 | 17 | 72,833,331 | 72,935,743 | alt |
| KZ559114.1 | NW_019805501.1 | PATCHES | REGION176 | 17 | 72,833,331 | 72,935,743 | novel |
| GL383566.1 | NW_003315955.1 | ALT_REF_LOCI_1 | REGION30 | 17 | 77,220,730 | 77,299,326 | alt |
| KI270860.1 | NT_187612.1 | ALT_REF_LOCI_1 | B3GNTL1 | 17 | 82,922,720 | 83,103,577 | alt |
| KZ559116.1 | NW_019805503.1 | PATCHES | REGION274 | 18 | 1,744,182 | 1,884,837 | novel |
| KQ458385.1 | NW_014040928.1 | PATCHES | REGION230 | 18 | 22,388,680 | 22,588,100 | novel |
| KI270864.1 | NT_187618.1 | ALT_REF_LOCI_1 | REGION177 | 18 | 43,667,277 | 43,773,892 | alt |
| KZ559115.1 | NW_019805502.1 | PATCHES | SLC14A2_AS1 | 18 | 45,379,886 | 45,610,729 | fix |
| KQ090028.1 | NW_013171814.1 | PATCHES | CTIF | 18 | 48,514,982 | 48,918,117 | fix |
| GL383567.1 | NW_003315956.1 | ALT_REF_LOCI_1 | REGION31 | 18 | 50,292,194 | 50,574,792 | alt |
| GL383570.1 | NW_003315959.1 | ALT_REF_LOCI_1 | REGION32 | 18 | 51,662,936 | 51,821,642 | alt |
| GL383571.1 | NW_003315960.1 | ALT_REF_LOCI_1 | REGION33 | 18 | 67,423,723 | 67,552,551 | alt |
| KZ208922.1 | NW_018654724.1 | PATCHES | REGION258 | 18 | 70,423,088 | 70,510,260 | fix |
| GL383568.1 | NW_003315957.1 | ALT_REF_LOCI_1 | REGION34 | 18 | 72,933,122 | 73,024,781 | alt |
| GL383569.1 | NW_003315958.1 | ALT_REF_LOCI_1 | REGION35 | 18 | 78,493,467 | 78,664,469 | alt |
| KI270912.1 | NT_187665.1 | ALT_REF_LOCI_2 | REGION35 | 18 | 78,493,467 | 78,664,469 | alt |
| GL383572.1 | NW_003315961.1 | ALT_REF_LOCI_1 | REGION36 | 18 | 78,934,886 | 79,088,997 | alt |
| KI270911.1 | NT_187666.1 | ALT_REF_LOCI_2 | REGION36 | 18 | 78,934,886 | 79,088,997 | alt |
| KI270863.1 | NT_187617.1 | ALT_REF_LOCI_1 | REGION178 | 18 | 79,563,122 | 79,725,366 | alt |
| KI270868.1 | NT_187622.1 | ALT_REF_LOCI_1 | ELANE | 19 | 821,158 | 881,412 | alt |
| KI270865.1 | NT_187621.1 | ALT_REF_LOCI_1 | SBNO2 | 19 | 1,107,414 | 1,158,195 | alt |
| GL383573.1 | NW_003315962.1 | ALT_REF_LOCI_1 | ZNF66 | 19 | 20,663,141 | 21,042,381 | alt |
| GL383575.2 | NW_003315964.2 | ALT_REF_LOCI_1 | REGION37 | 19 | 21,648,290 | 21,809,032 | alt |
| GL383576.1 | NW_003315965.1 | ALT_REF_LOCI_1 | REGION39 | 19 | 22,120,850 | 22,300,666 | alt |
| GL383574.1 | NW_003315963.1 | ALT_REF_LOCI_1 | REGION38 | 19 | 34,152,260 | 34,300,950 | alt |
| KI270866.1 | NT_187619.1 | ALT_REF_LOCI_1 | GPI | 19 | 34,350,807 | 34,392,977 | alt |
| KQ458386.1 | NW_014040929.1 | PATCHES | REGION231 | 19 | 38,590,365 | 38,995,717 | fix |
| KN196484.1 | NW_009646206.1 | PATCHES | FCGBP | 19 | 39,740,125 | 40,095,774 | fix |
| KI270867.1 | NT_187620.1 | ALT_REF_LOCI_1 | CEACAM_REGION_1 | 19 | 41,456,581 | 41,682,000 | alt |
| GL000209.2 | NT_113949.2 | ALT_REF_LOCI_35 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| GL949746.1 | NW_003571054.1 | ALT_REF_LOCI_1 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| GL949747.2 | NW_003571055.2 | ALT_REF_LOCI_2 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| GL949748.2 | NW_003571056.2 | ALT_REF_LOCI_3 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| GL949749.2 | NW_003571057.2 | ALT_REF_LOCI_4 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| GL949750.2 | NW_003571058.2 | ALT_REF_LOCI_5 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| GL949751.2 | NW_003571059.2 | ALT_REF_LOCI_6 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| GL949752.1 | NW_003571060.1 | ALT_REF_LOCI_7 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| GL949753.2 | NW_003571061.2 | ALT_REF_LOCI_8 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| KI270882.1 | NT_187636.1 | ALT_REF_LOCI_10 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| KI270883.1 | NT_187637.1 | ALT_REF_LOCI_11 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| KI270884.1 | NT_187638.1 | ALT_REF_LOCI_12 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| KI270885.1 | NT_187639.1 | ALT_REF_LOCI_13 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| KI270886.1 | NT_187640.1 | ALT_REF_LOCI_14 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| KI270887.1 | NT_187641.1 | ALT_REF_LOCI_15 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| KI270888.1 | NT_187642.1 | ALT_REF_LOCI_16 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| KI270889.1 | NT_187643.1 | ALT_REF_LOCI_17 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| KI270890.1 | NT_187644.1 | ALT_REF_LOCI_18 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| KI270891.1 | NT_187645.1 | ALT_REF_LOCI_19 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| KI270914.1 | NT_187668.1 | ALT_REF_LOCI_20 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| KI270915.1 | NT_187669.1 | ALT_REF_LOCI_21 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| KI270916.1 | NT_187670.1 | ALT_REF_LOCI_22 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| KI270917.1 | NT_187671.1 | ALT_REF_LOCI_23 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| KI270918.1 | NT_187672.1 | ALT_REF_LOCI_24 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| KI270919.1 | NT_187673.1 | ALT_REF_LOCI_25 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| KI270920.1 | NT_187674.1 | ALT_REF_LOCI_26 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| KI270921.1 | NT_187675.1 | ALT_REF_LOCI_27 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| KI270922.1 | NT_187676.1 | ALT_REF_LOCI_28 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| KI270923.1 | NT_187677.1 | ALT_REF_LOCI_29 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| KI270929.1 | NT_187683.1 | ALT_REF_LOCI_30 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| KI270930.1 | NT_187684.1 | ALT_REF_LOCI_31 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| KI270931.1 | NT_187685.1 | ALT_REF_LOCI_32 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| KI270932.1 | NT_187686.1 | ALT_REF_LOCI_33 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| KI270933.1 | NT_187687.1 | ALT_REF_LOCI_34 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| KI270938.1 | NT_187693.1 | ALT_REF_LOCI_9 | LRC_KIR | 19 | 54,025,634 | 55,084,318 | alt |
| KV575246.1 | NW_016107300.1 | PATCHES | LRC_KIR | 19 | 54,025,634 | 55,084,318 | novel |
| KV575247.1 | NW_016107301.1 | PATCHES | LRC_KIR | 19 | 54,025,634 | 55,084,318 | novel |
| KV575248.1 | NW_016107302.1 | PATCHES | LRC_KIR | 19 | 54,025,634 | 55,084,318 | novel |
| KV575249.1 | NW_016107303.1 | PATCHES | LRC_KIR | 19 | 54,025,634 | 55,084,318 | novel |
| KV575250.1 | NW_016107304.1 | PATCHES | LRC_KIR | 19 | 54,025,634 | 55,084,318 | novel |
| KV575251.1 | NW_016107305.1 | PATCHES | LRC_KIR | 19 | 54,025,634 | 55,084,318 | novel |
| KV575252.1 | NW_016107306.1 | PATCHES | LRC_KIR | 19 | 54,025,634 | 55,084,318 | novel |
| KV575253.1 | NW_016107307.1 | PATCHES | LRC_KIR | 19 | 54,025,634 | 55,084,318 | novel |
| KV575254.1 | NW_016107308.1 | PATCHES | LRC_KIR | 19 | 54,025,634 | 55,084,318 | novel |
| KV575255.1 | NW_016107309.1 | PATCHES | LRC_KIR | 19 | 54,025,634 | 55,084,318 | novel |
| KV575256.1 | NW_016107310.1 | PATCHES | LRC_KIR | 19 | 54,025,634 | 55,084,318 | novel |
| KV575257.1 | NW_016107311.1 | PATCHES | LRC_KIR | 19 | 54,025,634 | 55,084,318 | novel |
| KV575258.1 | NW_016107312.1 | PATCHES | LRC_KIR | 19 | 54,025,634 | 55,084,318 | novel |
| KV575259.1 | NW_016107313.1 | PATCHES | LRC_KIR | 19 | 54,025,634 | 55,084,318 | novel |
| KV575260.1 | NW_016107314.1 | PATCHES | LRC_KIR | 19 | 54,025,634 | 55,084,318 | novel |
| GL383577.2 | NW_003315966.2 | ALT_REF_LOCI_1 | REGION40 | 20 | 17,771,102 | 17,893,471 | alt |
| KI270869.1 | NT_187623.1 | ALT_REF_LOCI_1 | REGION179 | 20 | 61,886,306 | 62,008,187 | alt |
| KI270871.1 | NT_187625.1 | ALT_REF_LOCI_1 | REGION181 | 20 | 63,414,721 | 63,471,095 | alt |
| KI270870.1 | NT_187624.1 | ALT_REF_LOCI_1 | REGION180 | 20 | 64,095,055 | 64,274,842 | alt |
| GL383578.2 | NW_003315967.2 | ALT_REF_LOCI_1 | REGION41 | 21 | 14,424,141 | 14,475,471 | alt |
| KI270874.1 | NT_187628.1 | ALT_REF_LOCI_1 | REGION182 | 21 | 17,146,893 | 17,310,433 | alt |
| KI270873.1 | NT_187627.1 | ALT_REF_LOCI_1 | REGION183 | 21 | 17,603,695 | 17,744,061 | alt |
| GL383579.2 | NW_003315968.2 | ALT_REF_LOCI_1 | REGION42 | 21 | 22,102,474 | 22,296,968 | alt |
| GL383580.2 | NW_003315969.2 | ALT_REF_LOCI_1 | REGION43 | 21 | 32,769,079 | 32,837,937 | alt |
| GL383581.2 | NW_003315970.2 | ALT_REF_LOCI_1 | TMEM50B | 21 | 33,405,429 | 33,512,559 | alt |
| KI270872.1 | NT_187626.1 | ALT_REF_LOCI_1 | SPATC1L | 21 | 46,140,942 | 46,221,322 | alt |
| KI270875.1 | NT_187629.1 | ALT_REF_LOCI_1 | IGL | 22 | 22,373,449 | 22,624,257 | alt |
| KI270878.1 | NT_187632.1 | ALT_REF_LOCI_1 | REGION184 | 22 | 23,354,043 | 23,516,062 | alt |
| KI270879.1 | NT_187633.1 | ALT_REF_LOCI_1 | REGION185 | 22 | 23,763,639 | 24,013,509 | alt |
| KI270876.1 | NT_187630.1 | ALT_REF_LOCI_1 | APOL5 | 22 | 35,685,234 | 35,942,668 | alt |
| KI270877.1 | NT_187631.1 | ALT_REF_LOCI_1 | REGION186 | 22 | 36,779,214 | 36,877,704 | alt |
| GL383583.2 | NW_003315972.2 | ALT_REF_LOCI_1 | APOBEC | 22 | 38,884,294 | 39,011,160 | alt |
| GL383582.2 | NW_003315971.2 | ALT_REF_LOCI_1 | CYP2D6 | 22 | 42,077,656 | 42,253,758 | alt |
| KB663609.1 | NW_004504305.1 | ALT_REF_LOCI_2 | CYP2D6 | 22 | 42,077,656 | 42,253,758 | alt |
| KI270928.1 | NT_187682.1 | ALT_REF_LOCI_3 | CYP2D6 | 22 | 42,077,656 | 42,253,758 | alt |
| KN196485.1 | NW_009646207.1 | PATCHES | CYP2D6 | 22 | 42,077,656 | 42,253,758 | novel |
| KN196486.1 | NW_009646208.1 | PATCHES | CYP2D6 | 22 | 42,077,656 | 42,253,758 | novel |
| KQ458387.1 | NW_014040930.1 | PATCHES | CYP2D6 | 22 | 42,077,656 | 42,253,758 | novel |
| KQ458388.1 | NW_014040931.1 | PATCHES | CYP2D6 | 22 | 42,077,656 | 42,253,758 | novel |
| KQ759761.1 | NW_015148968.1 | PATCHES | CYP2D6 | 22 | 42,077,656 | 42,253,758 | novel |
| KQ759762.1 | NW_015148969.1 | PATCHES | SHANK3 | 22 | 50,663,907 | 50,764,925 | fix |
| KI270880.1 | NT_187634.1 | ALT_REF_LOCI_1 | REGION187 | X | 319,338 | 601,516 | alt |
| KI270913.1 | NT_187667.1 | ALT_REF_LOCI_2 | REGION187 | X | 319,338 | 601,516 | alt |
| KV766199.1 | NW_017363820.1 | PATCHES | REGION239 | X | 4,950,957 | 5,129,468 | novel |
| KI270881.1 | NT_187635.1 | ALT_REF_LOCI_1 | REGION188 | X | 79,965,154 | 80,097,082 | alt |
| KZ208923.1 | NW_018654725.1 | PATCHES | REGION259 | Y | 9,034,110 | 9,132,718 | fix |
| KZ208924.1 | NW_018654726.1 | PATCHES | REGION260 | Y | 21,578,942 | 21,828,659 | fix |
| KN196487.1 | NW_009646209.1 | PATCHES | REGION198 | Y | 56,821,510 | 56,887,902 | fix |
| KN538374.1 | NW_011332701.1 | PATCHES | REGION1A | KI270905.1|NT_187660.1 | 1 | 5,161,414 | fix |
GRCh37.p13
- Release date: June 28, 2013
- Release type: minor
- Release notes: In this minor assembly release, 10 patches were added, all of type FIX. Also, 15 patches were updated, 14 of type FIX and 1 of type NOVEL.
- Assembly accessions: GenBank: GCA_000001405.14, RefSeq: GCF_000001405.25
| Name | Chr | Start | Stop |
|---|---|---|---|
| PAR#1 | X | 60,001 | 2,699,520 |
| PAR#2 | X | 154,931,044 | 155,260,560 |
| PAR#1 | Y | 10,001 | 2,649,520 |
| PAR#2 | Y | 59,034,050 | 59,363,566 |
| Scaffold IDs | Assembly unit | Region name | Chr | Start | Stop | Type |
|---|---|---|---|---|---|---|
| JH806574.2 | NW_004070864.2 | PATCHES | REGION77 | 1 | 3,823,584 | 3,845,268 | fix |
| GL949741.1 | NW_003571030.1 | PATCHES | REGION60 | 1 | 31,872,759 | 32,017,063 | fix |
| JH636053.3 | NW_003871056.3 | PATCHES | 1P11 | 1 | 120,471,050 | 121,346,350 | fix |
| JH636052.4 | NW_003871055.3 | PATCHES | 1Q21 | 1 | 143,871,003 | 150,440,213 | fix |
| GL383518.1 | NW_003315905.1 | PATCHES | REGION2 | 1 | 153,673,007 | 153,838,214 | novel |
| GL383519.1 | NW_003315906.1 | PATCHES | MTX1 | 1 | 155,180,173 | 155,275,036 | novel |
| GL383520.1 | NW_003315907.1 | PATCHES | REGION3 | 1 | 198,339,213 | 198,694,304 | novel |
| JH806573.1 | NW_004070863.1 | PATCHES | REGION78 | 1 | 205,916,833 | 205,922,707 | fix |
| JH636054.1 | NW_003871057.1 | PATCHES | 1Q32 | 1 | 206,072,708 | 206,940,869 | fix |
| JH806575.1 | NW_004070865.1 | PATCHES | REGION79 | 1 | 235,167,042 | 235,192,211 | fix |
| GL383516.1 | NW_003315903.1 | PATCHES | REGION1 | 1 | 248,865,779 | 249,098,883 | fix |
| GL383517.1 | NW_003315904.1 | PATCHES | REGION1 | 1 | 248,865,779 | 249,098,883 | fix |
| GL383521.1 | NW_003315908.1 | PATCHES | REGION4 | 2 | 36,453,102 | 36,590,458 | novel |
| KB663603.1 | NW_004504299.1 | PATCHES | CD207 | 2 | 70,660,851 | 71,260,429 | fix |
| GL877871.1 | NW_003571032.1 | PATCHES | REGION55 | 2 | 95,326,172 | 95,618,108 | fix |
| GL582966.2 | NW_003571033.2 | PATCHES | REGION44 | 2 | 149,790,583 | 149,880,633 | novel |
| GL383522.1 | NW_003315909.1 | PATCHES | SPC25 | 2 | 169,686,873 | 169,793,704 | novel |
| GL877870.2 | NW_003571031.1 | PATCHES | REGION54 | 2 | 243,059,660 | 243,189,373 | fix |
| JH636055.1 | NW_003871060.1 | PATCHES | REGION73 | 3 | 11,856,742 | 12,027,971 | novel |
| JH159132.1 | NW_003871059.1 | PATCHES | SEMA3B | 3 | 50,267,585 | 50,368,277 | fix |
| GL383523.1 | NW_003315910.1 | PATCHES | VPRBP | 3 | 51,416,109 | 51,584,055 | fix |
| KE332495.1 | NW_004775426.1 | PATCHES | DCP1A | 3 | 53,185,062 | 53,448,933 | fix |
| GL383524.1 | NW_003315911.1 | PATCHES | DNAH12 | 3 | 57,369,478 | 57,399,969 | fix |
| JH159131.1 | NW_003871058.1 | PATCHES | REGION64 | 3 | 60,558,332 | 60,952,039 | fix |
| GL383525.1 | NW_003315912.1 | PATCHES | SLC25A26 | 3 | 66,270,271 | 66,308,065 | fix |
| GL383526.1 | NW_003315913.1 | PATCHES | REGION5 | 3 | 151,307,154 | 151,477,286 | novel |
| KE332496.1 | NW_004775427.1 | PATCHES | ZNF595_ZNF718 | 4 | 10,001 | 507,004 | fix |
| GL383528.1 | NW_003315915.1 | PATCHES | REGION6 | 4 | 34,519,577 | 34,885,480 | novel |
| GL383529.1 | NW_003315916.1 | PATCHES | LPHN3 | 4 | 62,777,687 | 62,877,254 | novel |
| GL000257.1 | NT_167250.1 | ALT_REF_LOCI_8 | UGT2B17 | 4 | 69,170,077 | 69,878,175 | alt |
| GL582967.1 | NW_003571035.1 | PATCHES | REGION45 | 4 | 75,382,210 | 75,689,879 | fix |
| GL383527.1 | NW_003315914.1 | PATCHES | REGION7 | 4 | 156,756,530 | 156,908,416 | novel |
| GL877872.1 | NW_003571034.1 | PATCHES | REGION56 | 4 | 190,828,226 | 191,044,276 | fix |
| GL383532.1 | NW_003315920.1 | PATCHES | REGION9 | 5 | 12,681,538 | 12,744,122 | novel |
| GL949742.1 | NW_003571036.1 | PATCHES | REGION61 | 5 | 29,036,605 | 29,254,576 | novel |
| GL339449.2 | NW_003315917.2 | PATCHES | SMA | 5 | 68,512,646 | 70,910,270 | novel |
| GL383530.1 | NW_003315918.1 | PATCHES | MCTP1 | 5 | 94,505,561 | 94,590,195 | novel |
| JH159133.1 | NW_003871061.1 | PATCHES | PPIP5K2 | 5 | 102,420,838 | 102,687,150 | fix |
| KE332497.1 | NW_004775428.1 | PATCHES | PCDHB | 5 | 140,144,410 | 140,687,716 | fix |
| GL383531.1 | NW_003315919.1 | PATCHES | REGION8 | 5 | 161,800,673 | 161,968,654 | novel |
| JH806576.1 | NW_004070866.1 | PATCHES | REGION80 | 6 | 26,585,843 | 26,826,779 | fix |
| GL000250.1 | NT_167244.1 | ALT_REF_LOCI_1 | MHC | 6 | 28,477,797 | 33,448,354 | alt |
| GL000251.1 | NT_113891.2 | ALT_REF_LOCI_2 | MHC | 6 | 28,477,797 | 33,448,354 | alt |
| GL000252.1 | NT_167245.1 | ALT_REF_LOCI_3 | MHC | 6 | 28,477,797 | 33,448,354 | alt |
| GL000253.1 | NT_167246.1 | ALT_REF_LOCI_4 | MHC | 6 | 28,477,797 | 33,448,354 | alt |
| GL000254.1 | NT_167247.1 | ALT_REF_LOCI_5 | MHC | 6 | 28,477,797 | 33,448,354 | alt |
| GL000255.1 | NT_167248.1 | ALT_REF_LOCI_6 | MHC | 6 | 28,477,797 | 33,448,354 | alt |
| GL000256.1 | NT_167249.1 | ALT_REF_LOCI_7 | MHC | 6 | 28,477,797 | 33,448,354 | alt |
| JH636057.1 | NW_003871063.1 | PATCHES | MHC | 6 | 28,477,797 | 33,448,354 | fix |
| GL383533.1 | NW_003315921.1 | PATCHES | REGION10 | 6 | 80,059,725 | 80,156,628 | novel |
| KB663604.1 | NW_004504300.1 | PATCHES | CD24 | 6 | 107,143,253 | 107,495,574 | fix |
| JH636056.1 | NW_003871062.1 | PATCHES | LAMA4 | 6 | 112,323,682 | 112,586,593 | fix |
| KE332498.1 | NW_004775429.1 | PATCHES | TMEM242 | 6 | 157,539,699 | 157,789,039 | fix |
| KB021644.1 | NW_004166862.1 | PATCHES | REGION99 | 6 | 169,194,170 | 169,351,741 | novel |
| GL582970.1 | NW_003571039.1 | PATCHES | REGION48 | 7 | 56,835,596 | 57,190,579 | fix |
| GL582969.1 | NW_003571038.1 | PATCHES | REGION46 | 7 | 57,342,227 | 57,586,048 | fix |
| KE332499.1 | NW_004775430.1 | PATCHES | INTS4L2 | 7 | 65,012,083 | 65,286,677 | fix |
| JH159134.2 | NW_003871064.1 | PATCHES | WILLIAMS | 7 | 71,935,722 | 75,921,852 | fix |
| GL582972.1 | NW_003571041.1 | PATCHES | REGION47 | 7 | 98,260,131 | 98,556,215 | fix |
| GL582968.1 | NW_003571037.1 | PATCHES | SH2B2 | 7 | 101,718,951 | 102,072,447 | fix |
| JH636058.1 | NW_003871065.1 | PATCHES | COPG2 | 7 | 129,984,424 | 130,721,755 | fix |
| GL383534.2 | NW_003315922.2 | PATCHES | REGION11 | 7 | 141,333,209 | 141,446,383 | novel |
| GL582971.1 | NW_003571040.1 | PATCHES | TRB | 7 | 141,557,850 | 142,778,624 | fix |
| GL949743.1 | NW_003571042.1 | PATCHES | REGION62 | 8 | 1,965,390 | 2,498,608 | fix |
| KE332500.1 | NW_004775431.1 | PATCHES | REGION102 | 8 | 48,176,435 | 48,405,006 | fix |
| JH159135.2 | NW_003871066.2 | PATCHES | JRK | 8 | 143,711,229 | 143,813,536 | fix |
| GL383535.1 | NW_003315923.1 | PATCHES | EPPK1_SPATC1 | 8 | 144,743,526 | 145,146,062 | fix |
| GL383536.1 | NW_003315924.1 | PATCHES | SCXB | 8 | 145,285,645 | 145,659,901 | fix |
| GL383539.1 | NW_003315928.1 | PATCHES | REGION14 | 9 | 7,428,994 | 7,577,169 | novel |
| JH636059.1 | NW_003871067.1 | PATCHES | CBWD3 | 9 | 70,835,469 | 71,130,847 | fix |
| GL383540.1 | NW_003315929.1 | PATCHES | REGION13 | 9 | 72,028,659 | 72,092,013 | novel |
| GL383541.1 | NW_003315930.1 | PATCHES | MAMDC2 | 9 | 72,639,029 | 72,804,234 | novel |
| GL383542.1 | NW_003315931.1 | PATCHES | REGION15 | 9 | 90,793,962 | 90,842,895 | novel |
| KB663605.1 | NW_004504301.1 | PATCHES | REGION100 | 9 | 92,286,339 | 92,528,796 | fix |
| JH806579.1 | NW_004070869.1 | PATCHES | REGION81 | 9 | 132,892,850 | 133,073,060 | fix |
| GL339450.1 | NW_003315925.1 | PATCHES | ABO | 9 | 136,049,442 | 136,369,192 | fix |
| JH806577.1 | NW_004070867.1 | PATCHES | REGION82 | 9 | 137,025,633 | 137,247,659 | fix |
| JH806578.1 | NW_004070868.1 | PATCHES | REGION82 | 9 | 137,025,633 | 137,247,659 | fix |
| GL383537.1 | NW_003315926.1 | PATCHES | REGION12 | 9 | 139,136,890 | 139,252,828 | fix |
| GL383538.1 | NW_003315927.1 | PATCHES | REGION12 | 9 | 139,136,890 | 139,252,828 | fix |
| GL877873.1 | NW_003571043.1 | PATCHES | REGION57 | 10 | 60,001 | 224,405 | fix |
| JH636060.1 | NW_003871071.1 | PATCHES | AKR1CL1 | 10 | 5,012,527 | 5,450,243 | fix |
| GL383543.1 | NW_003315932.1 | PATCHES | FAM23A_MRC1 | 10 | 17,613,209 | 18,252,930 | fix |
| GL383545.1 | NW_003315934.1 | PATCHES | REGION16 | 10 | 27,574,584 | 27,706,537 | novel |
| GL383546.1 | NW_003315935.1 | PATCHES | REGION18 | 10 | 45,670,681 | 45,964,419 | novel |
| JH591181.2 | NW_003871068.1 | PATCHES | 10Q11 | 10 | 46,224,334 | 51,886,485 | fix |
| KB663606.1 | NW_004504302.1 | PATCHES | 10Q11 | 10 | 46,224,334 | 51,886,485 | fix |
| JH591183.1 | NW_003871070.1 | PATCHES | ZNF518A | 10 | 97,861,451 | 98,039,369 | fix |
| KE332501.1 | NW_004775432.1 | PATCHES | ATRNL1 | 10 | 116,786,296 | 117,806,873 | fix |
| JH591182.1 | NW_003871069.1 | PATCHES | PNLIPRP2 | 10 | 118,348,517 | 118,544,777 | fix |
| GL383544.1 | NW_003315933.1 | PATCHES | REGION17 | 10 | 133,258,319 | 133,381,404 | fix |
| JH806580.1 | NW_004070870.1 | PATCHES | PPP2R2D | 10 | 133,727,528 | 133,781,577 | fix |
| JH591184.1 | NW_003871075.1 | PATCHES | SPON1 | 11 | 13,963,464 | 14,425,744 | fix |
| JH591185.1 | NW_003871082.1 | PATCHES | CALCA | 11 | 14,873,971 | 15,041,407 | fix |
| GL383547.1 | NW_003315936.1 | PATCHES | REGION19 | 11 | 25,191,953 | 25,340,626 | novel |
| GL582973.1 | NW_003571045.1 | PATCHES | REGION49 | 11 | 49,862,648 | 50,121,284 | fix |
| JH159136.1 | NW_003871073.1 | PATCHES | OLFACTORY_REGION_1 | 11 | 55,956,728 | 56,641,043 | novel |
| JH159137.1 | NW_003871074.1 | PATCHES | OLFACTORY_REGION_1 | 11 | 55,956,728 | 56,641,043 | novel |
| GL949744.1 | NW_003571046.1 | PATCHES | REGION63 | 11 | 69,614,786 | 69,922,571 | fix |
| JH806581.1 | NW_004070871.1 | PATCHES | SHANK2 | 11 | 70,301,893 | 71,088,948 | fix |
| JH159143.1 | NW_003871081.1 | PATCHES | B3GNT6 | 11 | 76,709,408 | 76,900,812 | fix |
| JH159141.2 | NW_003871079.1 | PATCHES | CWC15_SRSF8 | 11 | 94,611,846 | 94,852,618 | fix |
| JH159139.1 | NW_003871077.1 | PATCHES | MMP12 | 11 | 102,702,497 | 102,822,936 | fix |
| JH159142.2 | NW_003871080.1 | PATCHES | DIXDC1_ALG9 | 11 | 111,618,733 | 111,945,380 | fix |
| JH159140.1 | NW_003871078.1 | PATCHES | NCAM1 | 11 | 112,687,997 | 113,234,431 | fix |
| JH720443.2 | NW_003871072.2 | PATCHES | TREH | 11 | 118,245,278 | 118,653,701 | fix |
| JH159138.1 | NW_003871076.1 | PATCHES | SLC37A4 | 11 | 118,849,111 | 118,957,986 | fix |
| GL582974.1 | NW_003571048.1 | PATCHES | REGION50 | 12 | 60,001 | 282,464 | fix |
| GL877875.1 | NW_003571049.1 | PATCHES | REGION50 | 12 | 60,001 | 282,464 | novel |
| JH720444.2 | NW_003871083.2 | PATCHES | EMG1 | 12 | 6,907,581 | 7,178,849 | fix |
| GL877876.1 | NW_003571050.1 | PATCHES | REGION58 | 12 | 10,953,894 | 11,330,216 | novel |
| GL949745.1 | NW_003571047.1 | PATCHES | REGION58 | 12 | 10,953,894 | 11,330,216 | novel |
| GL383549.1 | NW_003315938.1 | PATCHES | REGION21 | 12 | 28,148,967 | 28,263,711 | novel |
| GL383550.1 | NW_003315939.1 | PATCHES | REGION22 | 12 | 58,326,520 | 58,486,538 | novel |
| GL383552.1 | NW_003315941.1 | PATCHES | REGION23 | 12 | 59,323,046 | 59,454,651 | novel |
| GL383553.2 | NW_003315942.2 | PATCHES | REGION24 | 12 | 101,505,377 | 101,652,073 | novel |
| KB663607.2 | NW_004504303.2 | PATCHES | KDM2B | 12 | 121,761,801 | 122,096,824 | fix |
| GL383551.1 | NW_003315940.1 | PATCHES | REGION20 | 12 | 126,711,744 | 126,890,020 | novel |
| GL383548.1 | NW_003315937.1 | PATCHES | GALNT9 | 12 | 132,806,993 | 132,967,794 | fix |
| GL582975.1 | NW_003571051.1 | PATCHES | REGION51 | 13 | 115,085,142 | 115,109,878 | fix |
| KB021645.1 | NW_004166863.1 | PATCHES | IGH | 14 | 105,803,171 | 107,268,434 | fix |
| GL383554.1 | NW_003315943.1 | PATCHES | REGION25 | 15 | 28,557,187 | 28,842,093 | novel |
| GL383555.1 | NW_003315944.1 | PATCHES | MEGF11 | 15 | 66,200,521 | 66,577,156 | novel |
| JH720445.1 | NW_003871084.1 | PATCHES | SYNM | 15 | 99,529,037 | 99,696,045 | fix |
| GL383556.1 | NW_003315945.1 | PATCHES | REGION26 | 16 | 55,822,434 | 56,002,460 | novel |
| JH720446.1 | NW_003871085.1 | PATCHES | REGION74 | 16 | 57,774,022 | 57,871,358 | fix |
| GL383557.1 | NW_003315946.1 | PATCHES | SNTB2 | 16 | 69,174,054 | 69,258,593 | novel |
| GL383563.2 | NW_003315952.2 | PATCHES | DOC2B_RPH3AL | 17 | 1 | 252,428 | novel |
| JH806582.2 | NW_004070872.2 | PATCHES | DOC2B_RPH3AL | 17 | 1 | 252,428 | fix |
| GL383562.1 | NW_003315951.1 | PATCHES | FAM101B | 17 | 252,429 | 296,626 | fix |
| GL383561.2 | NW_003315950.2 | PATCHES | REGION27 | 17 | 21,250,948 | 21,566,608 | fix |
| KE332502.1 | NW_004775433.1 | PATCHES | REGION103 | 17 | 22,174,115 | 22,263,006 | fix |
| JH159145.1 | NW_003871090.1 | PATCHES | SLC46A1 | 17 | 26,645,159 | 26,840,019 | fix |
| KB021646.2 | NW_004166864.2 | PATCHES | MMP28 | 17 | 34,034,852 | 34,246,252 | fix |
| GL383560.1 | NW_003315949.1 | PATCHES | MYO19 | 17 | 34,442,621 | 35,005,379 | fix |
| GL383559.2 | NW_003315948.2 | PATCHES | SOCS7 | 17 | 36,372,617 | 36,711,255 | fix |
| GL383564.1 | NW_003315953.1 | PATCHES | KRTAP_REGION_1 | 17 | 39,006,985 | 39,589,187 | novel |
| JH159146.1 | NW_003871091.1 | PATCHES | KRTAP_REGION_1 | 17 | 39,006,985 | 39,589,187 | novel |
| JH159147.1 | NW_003871092.1 | PATCHES | KRTAP_REGION_1 | 17 | 39,006,985 | 39,589,187 | novel |
| JH159148.1 | NW_003871093.1 | PATCHES | KRTAP_REGION_1 | 17 | 39,006,985 | 39,589,187 | novel |
| GL582976.1 | NW_003571052.1 | PATCHES | TTC25 | 17 | 39,869,611 | 40,277,911 | fix |
| GL000258.1 | NT_167251.1 | ALT_REF_LOCI_9 | MAPT | 17 | 43,384,864 | 44,913,631 | alt |
| JH720447.1 | NW_003871086.1 | PATCHES | MAPT | 17 | 43,384,864 | 44,913,631 | fix |
| GL383558.1 | NW_003315947.1 | PATCHES | PECAM1 | 17 | 62,273,514 | 62,649,312 | fix |
| JH159144.1 | NW_003871088.1 | PATCHES | REGION65 | 17 | 65,936,106 | 66,324,470 | fix |
| GL383565.1 | NW_003315954.1 | PATCHES | REGION28 | 17 | 68,302,419 | 68,520,360 | novel |
| GL383566.1 | NW_003315955.1 | PATCHES | REGION30 | 17 | 75,216,812 | 75,295,408 | novel |
| JH591186.1 | NW_003871089.1 | PATCHES | REGION69 | 17 | 77,412,077 | 77,766,016 | fix |
| JH636061.1 | NW_003871087.1 | PATCHES | BAHCC1 | 17 | 79,319,163 | 79,498,447 | fix |
| GL383567.1 | NW_003315956.1 | PATCHES | REGION31 | 18 | 47,818,564 | 48,101,162 | novel |
| GL383570.1 | NW_003315959.1 | PATCHES | REGION32 | 18 | 49,189,306 | 49,348,012 | novel |
| GL383571.1 | NW_003315960.1 | PATCHES | REGION33 | 18 | 65,090,960 | 65,219,788 | novel |
| GL383568.1 | NW_003315957.1 | PATCHES | REGION34 | 18 | 70,600,357 | 70,692,016 | novel |
| GL383569.1 | NW_003315958.1 | PATCHES | REGION35 | 18 | 76,253,467 | 76,412,030 | novel |
| GL383572.1 | NW_003315961.1 | PATCHES | REGION36 | 18 | 76,694,886 | 76,848,997 | novel |
| JH159149.1 | NW_003871094.1 | PATCHES | REGION66 | 19 | 8,634,915 | 8,926,179 | fix |
| GL582977.2 | NW_003571053.2 | PATCHES | REGION52 | 19 | 20,193,557 | 20,845,946 | fix |
| GL383573.1 | NW_003315962.1 | PATCHES | ZNF66 | 19 | 20,845,947 | 21,225,187 | novel |
| GL383575.2 | NW_003315964.2 | PATCHES | REGION37 | 19 | 21,831,092 | 21,991,834 | novel |
| GL383576.1 | NW_003315965.1 | PATCHES | REGION39 | 19 | 22,303,652 | 22,483,468 | novel |
| GL383574.1 | NW_003315963.1 | PATCHES | REGION38 | 19 | 34,643,165 | 34,791,855 | novel |
| KE332505.1 | NW_004775434.1 | PATCHES | CEACAM_REGION_1 | 19 | 41,936,867 | 42,514,711 | fix |
| GL949746.1 | NW_003571054.1 | PATCHES | LRC | 19 | 54,528,888 | 55,595,686 | novel |
| GL949747.1 | NW_003571055.1 | PATCHES | LRC | 19 | 54,528,888 | 55,595,686 | novel |
| GL949748.1 | NW_003571056.1 | PATCHES | LRC | 19 | 54,528,888 | 55,595,686 | novel |
| GL949749.1 | NW_003571057.1 | PATCHES | LRC | 19 | 54,528,888 | 55,595,686 | novel |
| GL949750.1 | NW_003571058.1 | PATCHES | LRC | 19 | 54,528,888 | 55,595,686 | novel |
| GL949751.1 | NW_003571059.1 | PATCHES | LRC | 19 | 54,528,888 | 55,595,686 | novel |
| GL949752.1 | NW_003571060.1 | PATCHES | LRC | 19 | 54,528,888 | 55,595,686 | novel |
| GL949753.1 | NW_003571061.1 | PATCHES | LRC | 19 | 54,528,888 | 55,595,686 | novel |
| KB021647.1 | NW_004166865.1 | PATCHES | LRC | 19 | 54,528,888 | 55,595,686 | fix |
| GL383577.1 | NW_003315966.1 | PATCHES | REGION40 | 20 | 17,751,747 | 17,874,115 | novel |
| JH720448.1 | NW_003871095.1 | PATCHES | DLGAP4 | 20 | 34,883,261 | 34,994,224 | fix |
| KB663608.1 | NW_004504304.1 | PATCHES | REGION101 | 20 | 53,978,607 | 54,220,677 | fix |
| GL582979.2 | NW_003571063.2 | PATCHES | REGION53 | 20 | 61,031,539 | 61,267,733 | fix |
| GL383578.1 | NW_003315967.1 | PATCHES | REGION41 | 21 | 15,796,462 | 15,847,792 | novel |
| GL383579.1 | NW_003315968.1 | PATCHES | REGION42 | 21 | 23,474,793 | 23,669,288 | novel |
| GL383580.1 | NW_003315969.1 | PATCHES | REGION43 | 21 | 34,141,390 | 34,210,247 | novel |
| GL383581.1 | NW_003315970.1 | PATCHES | TMEM50B | 21 | 34,777,735 | 34,884,866 | novel |
| KE332506.1 | NW_004775435.1 | PATCHES | KRTAP_REGION_2 | 21 | 45,916,561 | 46,223,846 | fix |
| JH806584.1 | NW_004070874.1 | PATCHES | REGION83 | 22 | 16,050,001 | 16,087,693 | fix |
| JH806583.1 | NW_004070873.1 | PATCHES | REGION84 | 22 | 16,656,462 | 16,697,850 | fix |
| JH806585.1 | NW_004070875.1 | PATCHES | REGION85 | 22 | 16,847,851 | 16,884,805 | fix |
| JH720449.1 | NW_003871096.1 | PATCHES | CLTCL1 | 22 | 19,134,297 | 19,346,604 | fix |
| GL383583.1 | NW_003315972.1 | PATCHES | APOBEC | 22 | 39,280,299 | 39,407,165 | novel |
| GL383582.2 | NW_003315971.2 | PATCHES | CYP2D6 | 22 | 42,473,660 | 42,648,568 | novel |
| KB663609.1 | NW_004504305.1 | PATCHES | CYP2D6 | 22 | 42,473,660 | 42,648,568 | novel |
| JH806586.1 | NW_004070876.1 | PATCHES | REGION86 | 22 | 51,203,354 | 51,244,566 | fix |
| GL877877.2 | NW_003571064.2 | PATCHES | REGION59 | X | 803,878 | 1,227,822 | fix |
| JH720451.1 | NW_003871098.1 | PATCHES | REGION75 | X | 36,202,464 | 37,669,766 | fix |
| JH720452.1 | NW_003871099.1 | PATCHES | REGION75 | X | 36,202,464 | 37,669,766 | fix |
| JH806589.1 | NW_004070879.1 | PATCHES | REGION87 | X | 45,534,581 | 45,805,400 | fix |
| KB021648.1 | NW_004166866.1 | PATCHES | PHF16 | X | 46,609,875 | 47,079,810 | fix |
| JH806587.1 | NW_004070877.1 | PATCHES | DGKK_REGION98 | X | 47,619,971 | 54,424,077 | fix |
| JH806590.2 | NW_004070880.2 | PATCHES | DGKK_REGION98 | X | 47,619,971 | 54,424,077 | fix |
| JH806591.1 | NW_004070881.1 | PATCHES | REGION88 | X | 62,203,738 | 63,086,230 | fix |
| JH806592.1 | NW_004070882.1 | PATCHES | REGION89 | X | 71,530,834 | 72,366,730 | fix |
| JH720453.1 | NW_003871100.1 | PATCHES | REGION76 | X | 75,200,416 | 77,450,502 | fix |
| JH720454.3 | NW_003871101.3 | PATCHES | REGION76 | X | 75,200,416 | 77,450,502 | fix |
| JH806593.1 | NW_004070883.1 | PATCHES | REGION90 | X | 100,573,313 | 100,962,928 | fix |
| JH806594.1 | NW_004070884.1 | PATCHES | REGION91 | X | 101,383,115 | 101,773,566 | fix |
| JH806595.1 | NW_004070885.1 | PATCHES | REGION92 | X | 103,118,514 | 103,552,339 | fix |
| JH720455.1 | NW_003871102.1 | PATCHES | TEX13A | X | 104,423,968 | 104,489,003 | fix |
| JH806588.1 | NW_004070878.1 | PATCHES | REGION93 | X | 112,661,943 | 115,918,761 | fix |
| JH806601.1 | NW_004070891.1 | PATCHES | REGION93 | X | 112,661,943 | 115,918,761 | fix |
| JH806602.1 | NW_004070892.1 | PATCHES | REGION93 | X | 112,661,943 | 115,918,761 | fix |
| JH806603.1 | NW_004070893.1 | PATCHES | REGION93 | X | 112,661,943 | 115,918,761 | fix |
| JH806596.1 | NW_004070886.1 | PATCHES | REGION94 | X | 119,081,534 | 119,495,352 | fix |
| JH806597.1 | NW_004070887.1 | PATCHES | REGION95 | X | 134,202,887 | 135,196,638 | fix |
| JH806598.1 | NW_004070888.1 | PATCHES | REGION96 | X | 139,986,363 | 140,891,303 | fix |
| JH806599.1 | NW_004070889.1 | PATCHES | REGION97 | X | 142,299,066 | 150,174,083 | fix |
| JH806600.2 | NW_004070890.2 | PATCHES | REGION97 | X | 142,299,066 | 150,174,083 | fix |
| JH159150.3 | NW_003871103.3 | PATCHES | REGION67 | X | 151,734,490 | 154,906,585 | fix |
GRCh37
- Release date: February 27, 2009
- Release type: major
- Release notes: This was the first major release of the human reference assembly made by the GRC. This release affected chromosome coordinates, placed alternate loci into a chromosome context and the GRC resolved 255 issues.
- Assembly accessions: GenBank: GCA_000001405.1, RefSeq: GCF_000001405.13
| Scaffold IDs | Assembly unit | Region name | Chr | Start | Stop | Type |
|---|---|---|---|---|---|---|
| GL000257.1 | NT_167250.1 | ALT_REF_LOCI_8 | UGT2B17 | 4 | 69,170,077 | 69,878,175 | alt |
| GL000250.1 | NT_167244.1 | ALT_REF_LOCI_1 | MHC | 6 | 28,477,797 | 33,448,354 | alt |
| GL000251.1 | NT_113891.2 | ALT_REF_LOCI_2 | MHC | 6 | 28,477,797 | 33,448,354 | alt |
| GL000252.1 | NT_167245.1 | ALT_REF_LOCI_3 | MHC | 6 | 28,477,797 | 33,448,354 | alt |
| GL000253.1 | NT_167246.1 | ALT_REF_LOCI_4 | MHC | 6 | 28,477,797 | 33,448,354 | alt |
| GL000254.1 | NT_167247.1 | ALT_REF_LOCI_5 | MHC | 6 | 28,477,797 | 33,448,354 | alt |
| GL000255.1 | NT_167248.1 | ALT_REF_LOCI_6 | MHC | 6 | 28,477,797 | 33,448,354 | alt |
| GL000256.1 | NT_167249.1 | ALT_REF_LOCI_7 | MHC | 6 | 28,477,797 | 33,448,354 | alt |
| GL000258.1 | NT_167251.1 | ALT_REF_LOCI_9 | MAPT | 17 | 43,384,864 | 44,913,631 | alt |