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    CAD1 MAC/Perforin domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839846, updated on 15-Oct-2023

    Summary

    Gene symbol
    CAD1
    Gene description
    MAC/Perforin domain-containing protein
    Primary source
    Araport:AT1G29690
    Locus tag
    AT1G29690
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    constitutively activated cell death 1; F15D2.24; F15D2_24; necrotic spotted lesion 2; NSL2
    Summary
    Encodes a protein containing a domain with significant homology to the MACPF (membrane attack complex and perforin) domain of complements and perforin proteins that are involved in innate immunity in animals. Transgenic <i>cad1-1</i> mutant plants show lesions seen in the hypersensitive response, as well as a spontaneous activation of expression of pathogenesis-related genes and leading to a 32-fold increase in salicylic acid (SA). CAD1 is postulated to act as a negative regulator controlling SA-mediated pathway of programmed cell death in plant immunity.
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    Genomic context

    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (10379020..10382153, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein Neighboring gene histone acetyltransferase (DUF1264) Neighboring gene ncRNA Neighboring gene Metallo-hydrolase/oxidoreductase superfamily protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    MAC/Perforin domain-containing protein
    NP_564333.1
    • constitutively activated cell death 1 (CAD1); CONTAINS InterPro DOMAIN/s: Membrane attack complex component/perforin (MACPF) domain (InterPro:IPR020864); BEST Arabidopsis thaliana protein match is: MAC/Perforin domain-containing protein (TAIR:AT4G24290.2); Has 226 Blast hits to 225 proteins in 30 species: Archae - 0; Bacteria - 6; Metazoa - 14; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      10379020..10382153 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102709.4NP_564333.1  MAC/Perforin domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564333.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q940R0, Q9C7N2
      UniProtKB/TrEMBL
      A0A178WDY6, A0A5S9WBI2, A0A654EEU2
      Conserved Domains (1) summary
      pfam01823
      Location:116300
      MACPF; MAC/Perforin domain