NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Reviewer access | Sign OutHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE87484 Query DataSets for GSE87484
Status Public on Mar 16, 2017
Title PCGF6-PRC1 suppresses premature differentiation of embryonic stem cells by silencing germ cell-related genes [ChIP-Seq]
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq data of embryonic stem cells to detect Ring1b and Pcgf6 binding sites
ChIP-seq of embryonic stem cell H3K9me2 with or without Pcgf6.
 
Overall design ChIP-seq data of embryonic stem cells to detect Ring1b and Pcgf6 binding sites
ChIP-seq of H3K9me2 with or without Pcgf6 using conditional KO mouse embryonic stem cell.
 
Contributor(s) Endoh M, Koseki H, Sharif J, Endo TA
Citation(s) 28304275
Submission date Sep 29, 2016
Last update date May 15, 2019
Contact name Takaho A. Endo
E-mail(s) takaho.endo@riken.jp
Organization name RIKEN
Department IMS
Lab Laboratory for Integrative Genomics
Street address 1-7-22 Suehiro, Tsurumi
City Yokohama
State/province Kanagawa
ZIP/Postal code 230-0045
Country Japan
 
Platforms (1)
GPL18480 Illumina HiSeq 1500 (Mus musculus)
Samples (7)
GSM2332490 Pcgf6 fl/fl ESC_OHT- (wild-type control)
GSM2332491 Pcgf6 fl/fl ESC_OHT+ day4
GSM2332492 Pcgf6 fl/fl ESC_OHT+ day8
This SubSeries is part of SuperSeries:
GSE87485 PCGF6-PRC1 suppresses premature differentiation of embryonic stem cells by silencing germ cell-related genes
Relations
BioProject PRJNA344893
SRA SRP090632

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE87484_RAW.tar 62.1 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap