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Sample GSM990470 Query DataSets for GSM990470
Status Public on Nov 21, 2012
Title age 80y 8086
Sample type genomic
 
Source name X8086
Organism Homo sapiens
Characteristics age (y): 80
source: UCSD
plate: 8
gender: M
ethnicity: Caucasian - European
tissue: whole blood
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified Qiagen FlexiGene DNA kit
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description whole blood
Data processing BeadStudio software v3.2
 
Submission date Aug 21, 2012
Last update date Nov 21, 2012
Contact name Justin Guinney
E-mail(s) justin.guinney@sagebase.org
Organization name Sage Bionetworks
Street address 2606 E Roy St
City Seattle
State/province WA
ZIP/Postal code 98110
Country USA
 
Platform ID GPL13534
Series (1)
GSE40279 Genome-wide Methylation Profiles Reveal Quantitative Views of Human Aging Rates

Data table header descriptions
ID_REF
VALUE Average Beta

Data table
ID_REF VALUE
cg13869341 0.8591401
cg14008030 0.5310525
cg12045430 0.0204643
cg20826792 0.1166341
cg00381604 0.01922465
cg20253340 0.5455391
cg21870274 0.8019226
cg03130891 0.035572646
cg24335620 0.8323638
cg16162899 0.8637125
cg17149495 0.9309334
cg22802167 0.9375905
cg24669183 0.8551754
cg17308840 0.3540256
cg17866181 0.9402062
cg24159721 0.1871317
cg15174812 0.3365728
cg08477687 0.6773288
cg00034556 0.3813818
cg00645010 0.2015308

Total number of rows: 473034

Table truncated, full table size 9782 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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